RNA–Protein interactions for RNA: ENST00000355072.9

HTT-201, Transcript of huntingtin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HTT, Length 13,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-201ENST00000355072 KDM5AP29375 1690 aaKnown RBP9.31□□□□□ -0.92
HTT-201ENST00000355072 VCXQ9H320 206 aa9.31□□□□□ -0.92
HTT-201ENST00000355072 ALDH1L2Q3SY69 923 aa9.31□□□□□ -0.92
HTT-201ENST00000355072 VPS37DQ86XT2 251 aa9.3□□□□□ -0.92
HTT-201ENST00000355072 PDILTQ8N807 584 aa9.3□□□□□ -0.92
HTT-201ENST00000355072 NFXL1Q6ZNB6 911 aa9.3□□□□□ -0.92
HTT-201ENST00000355072 NCOA2Q15596 1464 aa9.3□□□□□ -0.92
HTT-201ENST00000355072 TOMM22Q9NS69 142 aa9.3□□□□□ -0.92
HTT-201ENST00000355072 LUC7L2Q9Y383 392 aaKnown RBP9.3□□□□□ -0.92
HTT-201ENST00000355072 EBAG9O00559 213 aa9.3□□□□□ -0.92
HTT-201ENST00000355072 RPGRIP1Q96KN7 1286 aa9.3□□□□□ -0.92
HTT-201ENST00000355072 FRAT2O75474 233 aaPredicted RBP9.3□□□□□ -0.92
HTT-201ENST00000355072 CETN1Q12798 172 aa9.3□□□□□ -0.92
HTT-201ENST00000355072 BIVM-ERCC5R4GMW8 1640 aa9.3□□□□□ -0.92
HTT-201ENST00000355072 GCC2Q8IWJ2 1684 aa9.3□□□□□ -0.92
HTT-201ENST00000355072 TACC1O75410 805 aa9.3□□□□□ -0.92
HTT-201ENST00000355072 PPFIA1Q13136 1202 aa9.3□□□□□ -0.92
HTT-201ENST00000355072 ALDH3A1P30838 453 aa9.3□□□□□ -0.92
HTT-201ENST00000355072 STK38Q15208 465 aa9.3□□□□□ -0.92
HTT-201ENST00000355072 OGFRQ9NZT2 677 aa9.3□□□□□ -0.92
HTT-201ENST00000355072 A0A1B0GUL7 405 aa9.29□□□□□ -0.92
HTT-201ENST00000355072 NOL3O60936 208 aaKnown RBP9.29□□□□□ -0.92
HTT-201ENST00000355072 STX1AQ16623 288 aa9.29□□□□□ -0.92
HTT-201ENST00000355072 GNL3LQ9NVN8 582 aaKnown RBP9.29□□□□□ -0.92
HTT-201ENST00000355072 CCDC9Q9Y3X0 531 aaKnown RBP9.29□□□□□ -0.92
HTT-201ENST00000355072 TULP1O00294 542 aaPredicted RBP9.29□□□□□ -0.92
HTT-201ENST00000355072 DIAPH1O60610 1272 aaKnown RBP9.29□□□□□ -0.92
HTT-201ENST00000355072 SLMAPQ14BN4 828 aa9.29□□□□□ -0.92
HTT-201ENST00000355072 TSNAXIP1Q2TAA8 658 aa9.29□□□□□ -0.92
HTT-201ENST00000355072 GBP6Q6ZN66 633 aa9.29□□□□□ -0.92
HTT-201ENST00000355072 ZC3H15Q8WU90 426 aaKnown RBP9.29□□□□□ -0.92
HTT-201ENST00000355072 SLC4A10Q6U841 1118 aa9.29□□□□□ -0.92
HTT-201ENST00000355072 PNISRQ8TF01 805 aaKnown RBP9.29□□□□□ -0.92
HTT-201ENST00000355072 RABGAP1Q9Y3P9 1069 aa9.29□□□□□ -0.92
HTT-201ENST00000355072 YEATS4O95619 227 aa9.29□□□□□ -0.92
HTT-201ENST00000355072 MCM4P33991 863 aa9.29□□□□□ -0.92
HTT-201ENST00000355072 ANAPC15P60006 121 aa9.29□□□□□ -0.92
HTT-201ENST00000355072 ZMYM4Q5VZL5 1548 aa9.29□□□□□ -0.92
HTT-201ENST00000355072 CTAGE9A4FU28 777 aa9.29□□□□□ -0.92
HTT-201ENST00000355072 FERP16591 822 aa9.29□□□□□ -0.92
HTT-201ENST00000355072 KIF5BP33176 963 aa9.29□□□□□ -0.92
HTT-201ENST00000355072 NEK4P51957 841 aa9.29□□□□□ -0.92
HTT-201ENST00000355072 ARFGAP2Q8N6H7 521 aa9.29□□□□□ -0.92
HTT-201ENST00000355072 EID1Q9Y6B2 187 aa9.29□□□□□ -0.92
HTT-201ENST00000355072 SYNJ1O43426 1573 aa9.29□□□□□ -0.92
HTT-201ENST00000355072 UBTFL1P0CB47 393 aaPredicted RBP9.29□□□□□ -0.92
HTT-201ENST00000355072 CCDC158Q5M9N0 1113 aa9.29□□□□□ -0.92
HTT-201ENST00000355072 MEX3CQ5U5Q3 659 aaKnown RBP9.29□□□□□ -0.92
HTT-201ENST00000355072 FBF1Q8TES7 1133 aa9.29□□□□□ -0.92
HTT-201ENST00000355072 NAP1L3Q99457 506 aaPredicted RBP9.29□□□□□ -0.92
HTT-201ENST00000355072 PPP1R1BQ9UD71 204 aaPredicted RBP9.29□□□□□ -0.92
HTT-201ENST00000355072 PAFAH1B1P43034 410 aa9.29□□□□□ -0.92
HTT-201ENST00000355072 VIRMAQ69YN4 1812 aaKnown RBP9.28□□□□□ -0.92
HTT-201ENST00000355072 LRRC45Q96CN5 670 aa9.28□□□□□ -0.92
HTT-201ENST00000355072 ANKRD50Q9ULJ7 1429 aa9.28□□□□□ -0.92
HTT-201ENST00000355072 HMG20BQ9P0W2 317 aa9.28□□□□□ -0.92
HTT-201ENST00000355072 GON4LQ3T8J9 2241 aa9.28□□□□□ -0.92
HTT-201ENST00000355072 RAB11FIP3O75154 756 aa9.28□□□□□ -0.92
HTT-201ENST00000355072 CCDC114Q96M63 670 aa9.28□□□□□ -0.92
HTT-201ENST00000355072 FAM184BQ9ULE4 1060 aa9.28□□□□□ -0.92
HTT-201ENST00000355072 HSF2BPO75031 334 aa9.28□□□□□ -0.92
HTT-201ENST00000355072 AMPHP49418 695 aa9.28□□□□□ -0.92
HTT-201ENST00000355072 BMP2KLQ5H9B9 411 aa9.28□□□□□ -0.92
HTT-201ENST00000355072 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.28□□□□□ -0.924e-6■■■■□ 22
HTT-201ENST00000355072 AMPD3Q01432 767 aa9.28□□□□□ -0.92
HTT-201ENST00000355072 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.28□□□□□ -0.92
HTT-201ENST00000355072 U3KPZ7 1027 aaPredicted RBP9.28□□□□□ -0.92
HTT-201ENST00000355072 SF3B2Q13435 895 aaKnown RBP9.28□□□□□ -0.92
HTT-201ENST00000355072 FKBP15Q5T1M5 1219 aa9.28□□□□□ -0.92
HTT-201ENST00000355072 KIF4AO95239 1232 aa9.28□□□□□ -0.92
HTT-201ENST00000355072 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.28□□□□□ -0.92
HTT-201ENST00000355072 LRPPRCP42704 1394 aaKnown RBP9.28□□□□□ -0.92
HTT-201ENST00000355072 TEFQ10587 303 aa9.28□□□□□ -0.92
HTT-201ENST00000355072 STMN1P16949 149 aa9.27□□□□□ -0.92
HTT-201ENST00000355072 LRRC27Q9C0I9 530 aa9.27□□□□□ -0.92
HTT-201ENST00000355072 PPP4R3BQ5MIZ7 849 aa9.27□□□□□ -0.92
HTT-201ENST00000355072 SYNJ2O15056 1496 aa9.27□□□□□ -0.92
HTT-201ENST00000355072 G3V3G9 751 aa9.27□□□□□ -0.93
HTT-201ENST00000355072 PPP1R2P41236 205 aa9.27□□□□□ -0.93
HTT-201ENST00000355072 DCAF8Q5TAQ9 597 aa9.27□□□□□ -0.93
HTT-201ENST00000355072 BCAP29Q9UHQ4 241 aa9.27□□□□□ -0.93
HTT-201ENST00000355072 LRRFIP2Q9Y608 721 aaKnown RBP9.27□□□□□ -0.93
HTT-201ENST00000355072 IFFO1Q0D2I5 559 aa9.27□□□□□ -0.93
HTT-201ENST00000355072 TTC31Q49AM3 519 aaPredicted RBP9.27□□□□□ -0.93
HTT-201ENST00000355072 CRBNQ96SW2 442 aa9.27□□□□□ -0.93
HTT-201ENST00000355072 ATP11AP98196 1134 aa9.27□□□□□ -0.93
HTT-201ENST00000355072 TCHPQ9BT92 498 aa9.27□□□□□ -0.93
HTT-201ENST00000355072 ATP2A1O14983 1001 aa9.27□□□□□ -0.93
HTT-201ENST00000355072 CCDC12Q8WUD4 166 aaPredicted RBP9.27□□□□□ -0.93
HTT-201ENST00000355072 RMND1Q9NWS8 449 aa9.27□□□□□ -0.93
HTT-201ENST00000355072 PPP2R5EQ16537 467 aa9.27□□□□□ -0.93
HTT-201ENST00000355072 ARHGAP24Q8N264 748 aa9.27□□□□□ -0.93
HTT-201ENST00000355072 NLRP5P59047 1200 aa9.27□□□□□ -0.93
HTT-201ENST00000355072 WDR78Q5VTH9 848 aa9.27□□□□□ -0.93
HTT-201ENST00000355072 ZNF622Q969S3 477 aaKnown RBP eCLIP9.27□□□□□ -0.934e-6■□□□□ 10.1
HTT-201ENST00000355072 IBTKQ9P2D0 1353 aaPredicted RBP9.27□□□□□ -0.93
HTT-201ENST00000355072 SMC6Q96SB8 1091 aa9.27□□□□□ -0.93
HTT-201ENST00000355072 FGD5Q6ZNL6 1462 aa9.27□□□□□ -0.93
HTT-201ENST00000355072 LARP1BQ659C4 914 aaKnown RBP9.27□□□□□ -0.93
HTT-201ENST00000355072 EXOC6Q8TAG9 804 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms