RNA–Protein interactions for RNA: ENST00000354433.7

CDRT1-202, CMT1A duplicated region transcript 1, humanhuman

TSL 2 BASIC

Gene CDRT1, Length 1,557 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-202ENST00000354433 UTRNP46939 3433 aa15.51■□□□□ 0.07
CDRT1-202ENST00000354433 C4BP0C0L5 1744 aa15.5■□□□□ 0.07
CDRT1-202ENST00000354433 ANP32CO43423 234 aa15.5■□□□□ 0.07
CDRT1-202ENST00000354433 HMOX1P09601 288 aa15.5■□□□□ 0.07
CDRT1-202ENST00000354433 FLAD1Q8NFF5 587 aa15.5■□□□□ 0.07
CDRT1-202ENST00000354433 KDM6AO15550 1401 aaPredicted RBP15.5■□□□□ 0.07
CDRT1-202ENST00000354433 ERVV-2B6SEH9 535 aa15.49■□□□□ 0.07
CDRT1-202ENST00000354433 DIAPH1O60610 1272 aaKnown RBP15.49■□□□□ 0.07
CDRT1-202ENST00000354433 YY1P25490 414 aa15.49■□□□□ 0.07
CDRT1-202ENST00000354433 ATG3Q9NT62 314 aa15.49■□□□□ 0.07
CDRT1-202ENST00000354433 LINC00116Q8NCU8 138 aa15.49■□□□□ 0.07
CDRT1-202ENST00000354433 RBM42Q9BTD8 480 aaKnown RBP15.49■□□□□ 0.07
CDRT1-202ENST00000354433 NPC1L1Q9UHC9 1359 aa15.48■□□□□ 0.07
CDRT1-202ENST00000354433 CCER2I3L3R5 266 aa15.48■□□□□ 0.07
CDRT1-202ENST00000354433 GNPATO15228 680 aa15.48■□□□□ 0.07
CDRT1-202ENST00000354433 TAF1LQ8IZX4 1826 aa15.47■□□□□ 0.07
CDRT1-202ENST00000354433 MAP3K5Q99683 1374 aa15.47■□□□□ 0.07
CDRT1-202ENST00000354433 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.47■□□□□ 0.07
CDRT1-202ENST00000354433 U2SURPO15042 1029 aaKnown RBP15.47■□□□□ 0.07
CDRT1-202ENST00000354433 ITPK1Q13572 414 aa15.47■□□□□ 0.07
CDRT1-202ENST00000354433 PELP1Q8IZL8 1130 aaKnown RBP15.47■□□□□ 0.07
CDRT1-202ENST00000354433 SMIM5Q71RC9 77 aa15.46■□□□□ 0.07
CDRT1-202ENST00000354433 SSFA2P28290 1259 aa15.45■□□□□ 0.06
CDRT1-202ENST00000354433 AKAP4Q5JQC9 854 aa15.45■□□□□ 0.06
CDRT1-202ENST00000354433 AMIGO3Q86WK7 504 aa15.45■□□□□ 0.06
CDRT1-202ENST00000354433 PTCD1O75127 700 aaKnown RBP15.44■□□□□ 0.06
CDRT1-202ENST00000354433 CENPBP07199 599 aaPredicted RBP15.44■□□□□ 0.06
CDRT1-202ENST00000354433 GPR162Q16538 588 aa15.44■□□□□ 0.06
CDRT1-202ENST00000354433 NFATC2IPQ8NCF5 419 aa15.44■□□□□ 0.06
CDRT1-202ENST00000354433 NLGN2Q8NFZ4 835 aa15.43■□□□□ 0.06
CDRT1-202ENST00000354433 CFAP53Q96M91 514 aa15.43■□□□□ 0.06
CDRT1-202ENST00000354433 COL3A1P02461 1466 aaPredicted RBP15.42■□□□□ 0.06
CDRT1-202ENST00000354433 RTCBQ9Y3I0 505 aaKnown RBP15.42■□□□□ 0.06
CDRT1-202ENST00000354433 COL24A1Q17RW2 1714 aa15.41■□□□□ 0.06
CDRT1-202ENST00000354433 MTHFSDQ2M296 383 aaKnown RBP15.41■□□□□ 0.06
CDRT1-202ENST00000354433 UBR3Q6ZT12 1888 aa15.41■□□□□ 0.06
CDRT1-202ENST00000354433 SLC4A9Q96Q91 983 aa15.41■□□□□ 0.06
CDRT1-202ENST00000354433 SLC52A2Q9HAB3 445 aa15.4■□□□□ 0.06
CDRT1-202ENST00000354433 RNMTO43148 476 aaKnown RBP15.39■□□□□ 0.05
CDRT1-202ENST00000354433 TRAPPC3LQ5T215 181 aa15.39■□□□□ 0.05
CDRT1-202ENST00000354433 LGR6Q9HBX8 967 aa15.39■□□□□ 0.05
CDRT1-202ENST00000354433 CNTNAP4Q9C0A0 1308 aa15.38■□□□□ 0.05
CDRT1-202ENST00000354433 GOLGB1Q14789 3259 aaKnown RBP15.38■□□□□ 0.05
CDRT1-202ENST00000354433 SCN11AQ9UI33 1791 aa15.37■□□□□ 0.05
CDRT1-202ENST00000354433 GAS2L2Q8NHY3 880 aa15.37■□□□□ 0.05
CDRT1-202ENST00000354433 NUDCQ9Y266 331 aa15.37■□□□□ 0.05
CDRT1-202ENST00000354433 MRC1P22897 1456 aa15.37■□□□□ 0.05
CDRT1-202ENST00000354433 RFC4P35249 363 aa15.36■□□□□ 0.05
CDRT1-202ENST00000354433 ZNF831Q5JPB2 1677 aa15.36■□□□□ 0.05
CDRT1-202ENST00000354433 ADRA2BP18089 450 aa15.36■□□□□ 0.05
CDRT1-202ENST00000354433 PPP2R1AP30153 589 aa15.36■□□□□ 0.05
CDRT1-202ENST00000354433 CRKLP46109 303 aaKnown RBP15.36■□□□□ 0.05
CDRT1-202ENST00000354433 SLC39A6Q13433 755 aa15.36■□□□□ 0.05
CDRT1-202ENST00000354433 RC3H1Q5TC82 1133 aaKnown RBP15.36■□□□□ 0.05
CDRT1-202ENST00000354433 CD2APQ9Y5K6 639 aa15.36■□□□□ 0.05
CDRT1-202ENST00000354433 COL5A3P25940 1745 aaPredicted RBP15.35■□□□□ 0.05
CDRT1-202ENST00000354433 RPS6KA4O75676 772 aa15.35■□□□□ 0.05
CDRT1-202ENST00000354433 MMP10P09238 476 aa15.35■□□□□ 0.05
CDRT1-202ENST00000354433 U2AF1L5P0DN76 240 aaPredicted RBP15.35■□□□□ 0.05
CDRT1-202ENST00000354433 PRKAR2BP31323 418 aa15.35■□□□□ 0.05
CDRT1-202ENST00000354433 U2AF1Q01081 240 aaKnown RBP eCLIP15.35■□□□□ 0.05
CDRT1-202ENST00000354433 TTC5Q8N0Z6 440 aa15.35■□□□□ 0.05
CDRT1-202ENST00000354433 ARHGEF1Q92888 912 aaKnown RBP15.35■□□□□ 0.05
CDRT1-202ENST00000354433 PRKRIP1Q9H875 184 aaPredicted RBP15.35■□□□□ 0.05
CDRT1-202ENST00000354433 TEFQ10587 303 aa15.34■□□□□ 0.05
CDRT1-202ENST00000354433 WWC3Q9ULE0 1092 aa15.34■□□□□ 0.05
CDRT1-202ENST00000354433 GNAT3A8MTJ3 354 aa15.33■□□□□ 0.05
CDRT1-202ENST00000354433 DNAJC10Q8IXB1 793 aa15.33■□□□□ 0.05
CDRT1-202ENST00000354433 NLGN1Q8N2Q7 840 aa15.32■□□□□ 0.04
CDRT1-202ENST00000354433 YTHDC1Q96MU7 727 aaKnown RBP15.32■□□□□ 0.04
CDRT1-202ENST00000354433 TJP1Q07157 1748 aa15.32■□□□□ 0.04
CDRT1-202ENST00000354433 GRIN3BO60391 1043 aa15.32■□□□□ 0.04
CDRT1-202ENST00000354433 YBX3P16989 372 aaKnown RBP eCLIP15.32■□□□□ 0.04
CDRT1-202ENST00000354433 RSPH6AQ9H0K4 717 aa15.32■□□□□ 0.04
CDRT1-202ENST00000354433 GYS1P13807 737 aa15.31■□□□□ 0.04
CDRT1-202ENST00000354433 CCDC87Q9NVE4 849 aa15.31■□□□□ 0.04
CDRT1-202ENST00000354433 CICQ96RK0 1608 aaPredicted RBP15.31■□□□□ 0.04
CDRT1-202ENST00000354433 KCPQ6ZWJ8 1503 aa15.3■□□□□ 0.04
CDRT1-202ENST00000354433 ADAMTS7Q9UKP4 1686 aa15.3■□□□□ 0.04
CDRT1-202ENST00000354433 ZNF784Q8NCA9 323 aaPredicted RBP15.3■□□□□ 0.04
CDRT1-202ENST00000354433 PHACTR3Q96KR7 559 aa15.3■□□□□ 0.04
CDRT1-202ENST00000354433 PARP3Q9Y6F1 533 aa15.3■□□□□ 0.04
CDRT1-202ENST00000354433 C4AP0C0L4 1744 aa15.29■□□□□ 0.04
CDRT1-202ENST00000354433 IL17REQ8NFR9 667 aa15.29■□□□□ 0.04
CDRT1-202ENST00000354433 RTF1Q92541 710 aaKnown RBP15.29■□□□□ 0.04
CDRT1-202ENST00000354433 SRP68Q9UHB9 627 aaKnown RBP15.29■□□□□ 0.04
CDRT1-202ENST00000354433 NEFMP07197 916 aa15.28■□□□□ 0.04
CDRT1-202ENST00000354433 INTS5Q6P9B9 1019 aaKnown RBP15.28■□□□□ 0.04
CDRT1-202ENST00000354433 ZBTB1Q9Y2K1 713 aa15.28■□□□□ 0.04
CDRT1-202ENST00000354433 USP42Q9H9J4 1324 aaKnown RBP15.28■□□□□ 0.04
CDRT1-202ENST00000354433 VIRMAQ69YN4 1812 aaKnown RBP15.28■□□□□ 0.04
CDRT1-202ENST00000354433 ZPR1O75312 459 aa15.28■□□□□ 0.04
CDRT1-202ENST00000354433 CYP19A1P11511 503 aaPredicted RBP15.28■□□□□ 0.04
CDRT1-202ENST00000354433 MYH14Q7Z406 1995 aaKnown RBP15.28■□□□□ 0.04
CDRT1-202ENST00000354433 VSIG10Q8N0Z9 540 aa15.28■□□□□ 0.04
CDRT1-202ENST00000354433 COL15A1P39059 1388 aa15.27■□□□□ 0.03
CDRT1-202ENST00000354433 SOS1Q07889 1333 aaPredicted RBP15.27■□□□□ 0.03
CDRT1-202ENST00000354433 FCHSD2O94868 740 aa15.27■□□□□ 0.03
CDRT1-202ENST00000354433 ZNF790Q6PG37 636 aa15.27■□□□□ 0.03
CDRT1-202ENST00000354433 ZNF330Q9Y3S2 320 aaPredicted RBP15.27■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms