RNA–Protein interactions for RNA: ENST00000352993.7

BRCA1-201, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 3,668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-201ENST00000352993 UNC13BO14795 1591 aa9.16□□□□□ -0.94
BRCA1-201ENST00000352993 IQGAP3Q86VI3 1631 aa9.16□□□□□ -0.94
BRCA1-201ENST00000352993 CHMP4AQ9BY43 222 aa9.16□□□□□ -0.94
BRCA1-201ENST00000352993 GNAI1P63096 354 aa9.16□□□□□ -0.94
BRCA1-201ENST00000352993 SRCIN1Q9C0H9 1055 aa9.16□□□□□ -0.94
BRCA1-201ENST00000352993 NCBP1Q09161 790 aaKnown RBP9.15□□□□□ -0.94
BRCA1-201ENST00000352993 CCDC186Q7Z3E2 898 aa9.15□□□□□ -0.94
BRCA1-201ENST00000352993 ANKRD7Q92527 254 aa9.15□□□□□ -0.94
BRCA1-201ENST00000352993 ARHGAP45Q92619 1136 aa9.15□□□□□ -0.94
BRCA1-201ENST00000352993 PALD1Q9ULE6 856 aa9.15□□□□□ -0.94
BRCA1-201ENST00000352993 UBR1Q8IWV7 1749 aa9.15□□□□□ -0.94
BRCA1-201ENST00000352993 PDIA4P13667 645 aaKnown RBP9.15□□□□□ -0.94
BRCA1-201ENST00000352993 ZNF428Q96B54 188 aa9.15□□□□□ -0.94
BRCA1-201ENST00000352993 TRIM5Q9C035 493 aa9.15□□□□□ -0.94
BRCA1-201ENST00000352993 KCNF1Q9H3M0 494 aa9.15□□□□□ -0.94
BRCA1-201ENST00000352993 ARHGAP31Q2M1Z3 1444 aa9.15□□□□□ -0.94
BRCA1-201ENST00000352993 DUOX2Q9NRD8 1548 aa9.15□□□□□ -0.95
BRCA1-201ENST00000352993 CAMK4Q16566 473 aa9.15□□□□□ -0.95
BRCA1-201ENST00000352993 NCBP3Q53F19 620 aaKnown RBP9.15□□□□□ -0.95
BRCA1-201ENST00000352993 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.15□□□□□ -0.95
BRCA1-201ENST00000352993 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.15□□□□□ -0.95
BRCA1-201ENST00000352993 GABPB1Q06547 395 aaPredicted RBP9.14□□□□□ -0.95
BRCA1-201ENST00000352993 LRMPQ12912 555 aa9.14□□□□□ -0.95
BRCA1-201ENST00000352993 C8orf58Q8NAV2 365 aa9.14□□□□□ -0.95
BRCA1-201ENST00000352993 TIGD1Q96MW7 591 aa9.14□□□□□ -0.95
BRCA1-201ENST00000352993 MBIPQ9NS73 344 aa9.14□□□□□ -0.95
BRCA1-201ENST00000352993 VPS37CA5D8V6 355 aaPredicted RBP9.14□□□□□ -0.95
BRCA1-201ENST00000352993 GOLGA6L4A6NEF3 574 aa9.14□□□□□ -0.95
BRCA1-201ENST00000352993 CCDC192P0DO97 292 aa9.14□□□□□ -0.95
BRCA1-201ENST00000352993 UBE2HP62256 183 aa9.14□□□□□ -0.95
BRCA1-201ENST00000352993 RTF1Q92541 710 aaKnown RBP9.14□□□□□ -0.95
BRCA1-201ENST00000352993 SMC3Q9UQE7 1217 aa9.14□□□□□ -0.95
BRCA1-201ENST00000352993 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.13□□□□□ -0.95
BRCA1-201ENST00000352993 HMMRO75330 724 aa9.13□□□□□ -0.95
BRCA1-201ENST00000352993 ANKRD44Q8N8A2 993 aa9.13□□□□□ -0.95
BRCA1-201ENST00000352993 IPO4Q8TEX9 1081 aaKnown RBP9.13□□□□□ -0.95
BRCA1-201ENST00000352993 ANKRD36BQ8N2N9 1353 aa9.13□□□□□ -0.95
BRCA1-201ENST00000352993 TRAPPC8Q9Y2L5 1435 aa9.13□□□□□ -0.95
BRCA1-201ENST00000352993 DCTN1Q14203 1278 aa9.13□□□□□ -0.95
BRCA1-201ENST00000352993 RPAP2Q8IXW5 612 aaPredicted RBP9.13□□□□□ -0.95
BRCA1-201ENST00000352993 KRT222Q8N1A0 295 aa9.13□□□□□ -0.95
BRCA1-201ENST00000352993 PHACTR3Q96KR7 559 aa9.13□□□□□ -0.95
BRCA1-201ENST00000352993 EXOC6BQ9Y2D4 811 aa9.13□□□□□ -0.95
BRCA1-201ENST00000352993 CAMSAP1Q5T5Y3 1602 aa9.13□□□□□ -0.95
BRCA1-201ENST00000352993 IRX5P78411 483 aaPredicted RBP9.13□□□□□ -0.95
BRCA1-201ENST00000352993 CTNNA3Q9UI47 895 aa9.13□□□□□ -0.95
BRCA1-201ENST00000352993 ATP6V1DQ9Y5K8 247 aa9.13□□□□□ -0.95
BRCA1-201ENST00000352993 SMTNL1A8MU46 457 aa9.12□□□□□ -0.95
BRCA1-201ENST00000352993 KRT24Q2M2I5 525 aa9.12□□□□□ -0.95
BRCA1-201ENST00000352993 INTS4Q96HW7 963 aaKnown RBP9.12□□□□□ -0.95
BRCA1-201ENST00000352993 ABCC4O15439 1325 aa9.12□□□□□ -0.95
BRCA1-201ENST00000352993 FCHSD2O94868 740 aa9.12□□□□□ -0.95
BRCA1-201ENST00000352993 TNNT3P45378 269 aaPredicted RBP9.12□□□□□ -0.95
BRCA1-201ENST00000352993 PDE1AP54750 535 aa9.12□□□□□ -0.95
BRCA1-201ENST00000352993 CEP85Q6P2H3 762 aa9.12□□□□□ -0.95
BRCA1-201ENST00000352993 LUZP1Q86V48 1076 aa9.12□□□□□ -0.95
BRCA1-201ENST00000352993 CKAP2LQ8IYA6 745 aa9.12□□□□□ -0.95
BRCA1-201ENST00000352993 MEIS3Q99687 375 aa9.12□□□□□ -0.95
BRCA1-201ENST00000352993 ESYT1Q9BSJ8 1104 aa9.12□□□□□ -0.95
BRCA1-201ENST00000352993 CPS1P31327 1500 aa9.12□□□□□ -0.95
BRCA1-201ENST00000352993 AP5Z1O43299 807 aa9.12□□□□□ -0.95
BRCA1-201ENST00000352993 ZSCAN22P10073 491 aaPredicted RBP9.12□□□□□ -0.95
BRCA1-201ENST00000352993 CUL4AQ13619 759 aa9.12□□□□□ -0.95
BRCA1-201ENST00000352993 NFE2L2Q16236 605 aa9.12□□□□□ -0.95
BRCA1-201ENST00000352993 TERF2IPQ9NYB0 399 aa9.12□□□□□ -0.95
BRCA1-201ENST00000352993 FAM83GA6ND36 823 aa9.11□□□□□ -0.95
BRCA1-201ENST00000352993 CTIFO43310 598 aaKnown RBP9.11□□□□□ -0.95
BRCA1-201ENST00000352993 STX6O43752 255 aa9.11□□□□□ -0.95
BRCA1-201ENST00000352993 NRBP1Q9UHY1 535 aa9.11□□□□□ -0.95
BRCA1-201ENST00000352993 MINK1Q8N4C8 1332 aaPredicted RBP9.11□□□□□ -0.95
BRCA1-201ENST00000352993 MAP4K4O95819 1239 aaPredicted RBP9.11□□□□□ -0.95
BRCA1-201ENST00000352993 SLFN14P0C7P3 912 aa9.11□□□□□ -0.95
BRCA1-201ENST00000352993 DNM1Q05193 864 aaKnown RBP9.11□□□□□ -0.95
BRCA1-201ENST00000352993 DDX41Q9UJV9 622 aaKnown RBP9.11□□□□□ -0.95
BRCA1-201ENST00000352993 NWD1Q149M9 1564 aa9.11□□□□□ -0.95
BRCA1-201ENST00000352993 TERF2Q15554 542 aa9.11□□□□□ -0.95
BRCA1-201ENST00000352993 AEBP1Q8IUX7 1158 aa9.11□□□□□ -0.95
BRCA1-201ENST00000352993 SPHKAPQ2M3C7 1700 aa9.11□□□□□ -0.95
BRCA1-201ENST00000352993 FYB1O15117 783 aa9.1□□□□□ -0.95
BRCA1-201ENST00000352993 CALCOCO1Q9P1Z2 691 aa9.1□□□□□ -0.95
BRCA1-201ENST00000352993 TCHHQ07283 1943 aa9.1□□□□□ -0.95
BRCA1-201ENST00000352993 SYT1P21579 422 aa9.1□□□□□ -0.95
BRCA1-201ENST00000352993 CEP135Q66GS9 1140 aa9.1□□□□□ -0.95
BRCA1-201ENST00000352993 KIF18AQ8NI77 898 aa9.1□□□□□ -0.95
BRCA1-201ENST00000352993 CLTCL1P53675 1640 aa9.1□□□□□ -0.95
BRCA1-201ENST00000352993 LMTK2Q8IWU2 1503 aa9.1□□□□□ -0.95
BRCA1-201ENST00000352993 A2ML1A8K2U0 1454 aa9.1□□□□□ -0.95
BRCA1-201ENST00000352993 UGGT1Q9NYU2 1555 aa9.1□□□□□ -0.95
BRCA1-201ENST00000352993 RAPGEF3O95398 923 aa9.1□□□□□ -0.95
BRCA1-201ENST00000352993 HDGFL2Q7Z4V5 671 aaPredicted RBP9.1□□□□□ -0.95
BRCA1-201ENST00000352993 FERMT3Q86UX7 667 aa9.1□□□□□ -0.95
BRCA1-201ENST00000352993 DNAJC2Q99543 621 aaKnown RBP9.1□□□□□ -0.95
BRCA1-201ENST00000352993 TRIM34Q9BYJ4 488 aa9.1□□□□□ -0.95
BRCA1-201ENST00000352993 TRMT1Q9NXH9 659 aaKnown RBP9.1□□□□□ -0.95
BRCA1-201ENST00000352993 PAXBP1Q9Y5B6 917 aa9.1□□□□□ -0.95
BRCA1-201ENST00000352993 NSD2O96028 1365 aa9.09□□□□□ -0.95
BRCA1-201ENST00000352993 F13A1P00488 732 aa9.09□□□□□ -0.95
BRCA1-201ENST00000352993 MAP3K11Q16584 847 aa9.09□□□□□ -0.95
BRCA1-201ENST00000352993 NUP62CLQ9H1M0 184 aa9.09□□□□□ -0.95
BRCA1-201ENST00000352993 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms