RNA–Protein interactions for RNA: ENST00000352690.8

CD96-202, Transcript of CD96 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD96, Length 4,516 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD96-202ENST00000352690 CNNM1Q9NRU3 951 aa8.72□□□□□ -1.01
CD96-202ENST00000352690 B4DLN1 442 aa8.71□□□□□ -1.01
CD96-202ENST00000352690 TNPO2O14787 897 aaKnown RBP8.71□□□□□ -1.01
CD96-202ENST00000352690 KCNJ6P48051 423 aa8.71□□□□□ -1.01
CD96-202ENST00000352690 MRPL12P52815 198 aaKnown RBP8.71□□□□□ -1.01
CD96-202ENST00000352690 SHANK2Q9UPX8 1470 aa8.71□□□□□ -1.01
CD96-202ENST00000352690 RUFY4Q6ZNE9 571 aa8.71□□□□□ -1.02
CD96-202ENST00000352690 NIP7Q9Y221 180 aaKnown RBP eCLIP8.71□□□□□ -1.02
CD96-202ENST00000352690 RETREG2Q8NC44 543 aa8.71□□□□□ -1.02
CD96-202ENST00000352690 TRIM47Q96LD4 638 aa8.71□□□□□ -1.02
CD96-202ENST00000352690 CABP5Q9NP86 173 aa8.71□□□□□ -1.02
CD96-202ENST00000352690 DCDC2CA8MYV0 355 aa8.7□□□□□ -1.02
CD96-202ENST00000352690 LARP1Q6PKG0 1096 aaKnown RBP8.7□□□□□ -1.02
CD96-202ENST00000352690 GBA2Q9HCG7 927 aaPredicted RBP8.7□□□□□ -1.02
CD96-202ENST00000352690 NAP1L2Q9ULW6 460 aaPredicted RBP8.7□□□□□ -1.02
CD96-202ENST00000352690 KBTBD13C9JR72 458 aa8.7□□□□□ -1.02
CD96-202ENST00000352690 DCAF15Q66K64 600 aa8.7□□□□□ -1.02
CD96-202ENST00000352690 MPNDQ8N594 471 aa8.7□□□□□ -1.02
CD96-202ENST00000352690 TTC16Q8NEE8 873 aa8.7□□□□□ -1.02
CD96-202ENST00000352690 SIRT1Q96EB6 747 aa8.7□□□□□ -1.02
CD96-202ENST00000352690 TLR3O15455 904 aaKnown RBP8.7□□□□□ -1.02
CD96-202ENST00000352690 HSP90AB3PQ58FF7 597 aa8.7□□□□□ -1.02
CD96-202ENST00000352690 URB2Q14146 1524 aaKnown RBP8.69□□□□□ -1.02
CD96-202ENST00000352690 GCP02774 474 aa8.69□□□□□ -1.02
CD96-202ENST00000352690 UQCRHP07919 91 aa8.69□□□□□ -1.02
CD96-202ENST00000352690 NAA30Q147X3 362 aaPredicted RBP8.69□□□□□ -1.02
CD96-202ENST00000352690 JAG2Q9Y219 1238 aa8.69□□□□□ -1.02
CD96-202ENST00000352690 RP1L1Q8IWN7 2480 aaPredicted RBP8.69□□□□□ -1.02
CD96-202ENST00000352690 MYO9BQ13459 2157 aa8.69□□□□□ -1.02
CD96-202ENST00000352690 U2AF1L5P0DN76 240 aaPredicted RBP8.69□□□□□ -1.02
CD96-202ENST00000352690 CCNA1P78396 465 aa8.69□□□□□ -1.02
CD96-202ENST00000352690 U2AF1Q01081 240 aaKnown RBP eCLIP8.69□□□□□ -1.02
CD96-202ENST00000352690 TRMT112Q9UI30 125 aaKnown RBP8.69□□□□□ -1.02
CD96-202ENST00000352690 LRRC9Q6ZRR7 1453 aa8.69□□□□□ -1.02
CD96-202ENST00000352690 SLF2Q8IX21 1173 aa8.69□□□□□ -1.02
CD96-202ENST00000352690 BIRC2Q13490 618 aa8.68□□□□□ -1.02
CD96-202ENST00000352690 NBPF10Q6P3W6 841 aaKnown RBP8.68□□□□□ -1.02
CD96-202ENST00000352690 CYP4F22Q6NT55 531 aa8.68□□□□□ -1.02
CD96-202ENST00000352690 GADL1Q6ZQY3 521 aa8.68□□□□□ -1.02
CD96-202ENST00000352690 ZMYND15Q9H091 742 aa8.68□□□□□ -1.02
CD96-202ENST00000352690 SRGAP2BP0DMP2 458 aa8.68□□□□□ -1.02
CD96-202ENST00000352690 FOSL2P15408 326 aa8.68□□□□□ -1.02
CD96-202ENST00000352690 COL13A1Q5TAT6 717 aaPredicted RBP8.68□□□□□ -1.02
CD96-202ENST00000352690 CHRDL2Q6WN34 429 aa8.68□□□□□ -1.02
CD96-202ENST00000352690 UPF3BQ9BZI7 483 aaKnown RBP8.68□□□□□ -1.02
CD96-202ENST00000352690 REM2Q8IYK8 340 aaPredicted RBP8.68□□□□□ -1.02
CD96-202ENST00000352690 ZNF518AQ6AHZ1 1483 aa8.67□□□□□ -1.02
CD96-202ENST00000352690 FBXL21Q9UKT6 434 aa8.67□□□□□ -1.02
CD96-202ENST00000352690 GPTP24298 496 aa8.67□□□□□ -1.02
CD96-202ENST00000352690 TGFB2P61812 414 aa8.67□□□□□ -1.02
CD96-202ENST00000352690 TAF12Q16514 161 aa8.67□□□□□ -1.02
CD96-202ENST00000352690 FGD6Q6ZV73 1430 aa8.67□□□□□ -1.02
CD96-202ENST00000352690 DPP9Q86TI2 863 aa8.67□□□□□ -1.02
CD96-202ENST00000352690 PRDM10Q9NQV6 1147 aa8.67□□□□□ -1.02
CD96-202ENST00000352690 MYBBP1AQ9BQG0 1328 aaKnown RBP8.67□□□□□ -1.02
CD96-202ENST00000352690 EIF4G3O43432 1585 aaKnown RBP8.67□□□□□ -1.02
CD96-202ENST00000352690 PARD3Q8TEW0 1356 aa8.67□□□□□ -1.02
CD96-202ENST00000352690 ATXN3P54252 364 aaPredicted RBP8.66□□□□□ -1.02
CD96-202ENST00000352690 KCNQ4P56696 695 aa8.66□□□□□ -1.02
CD96-202ENST00000352690 NECAB2Q7Z6G3 386 aa8.66□□□□□ -1.02
CD96-202ENST00000352690 SLC28A3Q9HAS3 691 aa8.66□□□□□ -1.02
CD96-202ENST00000352690 ZFYVE16Q7Z3T8 1539 aa8.66□□□□□ -1.02
CD96-202ENST00000352690 FARP2O94887 1054 aaPredicted RBP8.66□□□□□ -1.02
CD96-202ENST00000352690 RAG1P15918 1043 aa8.66□□□□□ -1.02
CD96-202ENST00000352690 DPEP1P16444 411 aa8.66□□□□□ -1.02
CD96-202ENST00000352690 LTKP29376 864 aa8.66□□□□□ -1.02
CD96-202ENST00000352690 ACTN1P12814 892 aa8.66□□□□□ -1.02
CD96-202ENST00000352690 PCF11O94913 1555 aaKnown RBP8.65□□□□□ -1.02
CD96-202ENST00000352690 CALD1Q05682 793 aaKnown RBP8.65□□□□□ -1.02
CD96-202ENST00000352690 FOXD4L1Q9NU39 408 aa8.65□□□□□ -1.02
CD96-202ENST00000352690 EFCAB5A4FU69 1503 aa8.65□□□□□ -1.02
CD96-202ENST00000352690 CDC5LQ99459 802 aaKnown RBP8.65□□□□□ -1.02
CD96-202ENST00000352690 MFSD14CQ5VZR4 134 aa8.65□□□□□ -1.03
CD96-202ENST00000352690 MTMR7Q9Y216 660 aa8.65□□□□□ -1.03
CD96-202ENST00000352690 SALL2Q9Y467 1007 aaPredicted RBP8.65□□□□□ -1.03
CD96-202ENST00000352690 RPGRIP1LQ68CZ1 1315 aa8.65□□□□□ -1.03
CD96-202ENST00000352690 KIAA0556O60303 1618 aa8.65□□□□□ -1.03
CD96-202ENST00000352690 RAD17O75943 681 aa8.64□□□□□ -1.03
CD96-202ENST00000352690 SERPINB2P05120 415 aa8.64□□□□□ -1.03
CD96-202ENST00000352690 WWC1Q8IX03 1113 aa8.64□□□□□ -1.03
CD96-202ENST00000352690 TSC1Q92574 1164 aa8.64□□□□□ -1.03
CD96-202ENST00000352690 DDX11Q96FC9 970 aa8.64□□□□□ -1.03
CD96-202ENST00000352690 C9orf78Q9NZ63 289 aaPredicted RBP8.64□□□□□ -1.03
CD96-202ENST00000352690 TBC1D2BQ9UPU7 963 aa8.64□□□□□ -1.03
CD96-202ENST00000352690 LMOD3Q0VAK6 560 aa8.64□□□□□ -1.03
CD96-202ENST00000352690 NEO1Q92859 1461 aa8.64□□□□□ -1.03
CD96-202ENST00000352690 DNMBPQ6XZF7 1577 aa8.64□□□□□ -1.03
CD96-202ENST00000352690 PALM3A6NDB9 673 aaPredicted RBP8.64□□□□□ -1.03
CD96-202ENST00000352690 AXDND1Q5T1B0 1012 aaPredicted RBP8.64□□□□□ -1.03
CD96-202ENST00000352690 PAGR1Q9BTK6 254 aa8.64□□□□□ -1.03
CD96-202ENST00000352690 CEP290O15078 2479 aa8.64□□□□□ -1.03
CD96-202ENST00000352690 WDR33Q9C0J8 1336 aaKnown RBP8.64□□□□□ -1.03
CD96-202ENST00000352690 ATP10DQ9P241 1426 aa8.63□□□□□ -1.03
CD96-202ENST00000352690 TBC1D10BQ4KMP7 808 aaPredicted RBP8.63□□□□□ -1.03
CD96-202ENST00000352690 CAVIN4Q5BKX8 364 aa8.63□□□□□ -1.03
CD96-202ENST00000352690 MCOLN1Q9GZU1 580 aa8.63□□□□□ -1.03
CD96-202ENST00000352690 NCDNQ9UBB6 729 aa8.63□□□□□ -1.03
CD96-202ENST00000352690 NECTIN2Q92692 538 aa8.63□□□□□ -1.03
CD96-202ENST00000352690 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.63□□□□□ -1.03
CD96-202ENST00000352690 PNMA3Q9UL41 463 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms