RNA–Protein interactions for RNA: ENST00000352068.5

SNX15-201, Transcript of sorting nexin 15, humanhuman

TSL 5 BASIC

Gene SNX15, Length 771 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX15-201ENST00000352068 CNTNAP1P78357 1384 aa17.56■□□□□ 0.4
SNX15-201ENST00000352068 LOC102724428A0A0B4J2F2 783 aa17.56■□□□□ 0.4
SNX15-201ENST00000352068 SIK1P57059 783 aa17.56■□□□□ 0.4
SNX15-201ENST00000352068 RGPD2P0DJD1 1756 aa17.56■□□□□ 0.4
SNX15-201ENST00000352068 C4AP0C0L4 1744 aa17.55■□□□□ 0.4
SNX15-201ENST00000352068 TNRC18O15417 2968 aaPredicted RBP17.55■□□□□ 0.4
SNX15-201ENST00000352068 SBNO2Q9Y2G9 1366 aa17.55■□□□□ 0.4
SNX15-201ENST00000352068 PCDH11XQ9BZA7 1347 aa17.55■□□□□ 0.4
SNX15-201ENST00000352068 PCDH11YQ9BZA8 1340 aa17.55■□□□□ 0.4
SNX15-201ENST00000352068 CCDC85CA6NKD9 419 aa17.55■□□□□ 0.4
SNX15-201ENST00000352068 TRAPPC3LQ5T215 181 aa17.55■□□□□ 0.4
SNX15-201ENST00000352068 RAPGEF4Q8WZA2 1011 aa17.55■□□□□ 0.4
SNX15-201ENST00000352068 WBP1LQ9NX94 342 aa17.55■□□□□ 0.4
SNX15-201ENST00000352068 MAP2P11137 1827 aaKnown RBP17.55■□□□□ 0.4
SNX15-201ENST00000352068 ITGB4P16144 1822 aa17.55■□□□□ 0.4
SNX15-201ENST00000352068 KDM6AO15550 1401 aaPredicted RBP17.54■□□□□ 0.4
SNX15-201ENST00000352068 HOXC9P31274 260 aa17.53■□□□□ 0.4
SNX15-201ENST00000352068 PIGBQ92521 554 aa17.53■□□□□ 0.4
SNX15-201ENST00000352068 TATP17735 454 aaPredicted RBP17.52■□□□□ 0.4
SNX15-201ENST00000352068 LMNB1P20700 586 aa17.52■□□□□ 0.4
SNX15-201ENST00000352068 RTCBQ9Y3I0 505 aaKnown RBP17.52■□□□□ 0.4
SNX15-201ENST00000352068 CD163L1Q9NR16 1453 aa17.51■□□□□ 0.39
SNX15-201ENST00000352068 POTECB2RU33 542 aa17.51■□□□□ 0.39
SNX15-201ENST00000352068 AMPHP49418 695 aa17.51■□□□□ 0.39
SNX15-201ENST00000352068 NBPF6Q5VWK0 638 aa17.51■□□□□ 0.39
SNX15-201ENST00000352068 CHADLQ6NUI6 762 aa17.51■□□□□ 0.39
SNX15-201ENST00000352068 NBPF4Q96M43 638 aa17.51■□□□□ 0.39
SNX15-201ENST00000352068 HSPA8P11142 646 aaKnown RBP17.5■□□□□ 0.39
SNX15-201ENST00000352068 GYS1P13807 737 aa17.5■□□□□ 0.39
SNX15-201ENST00000352068 ADRA2BP18089 450 aa17.5■□□□□ 0.39
SNX15-201ENST00000352068 ATP6V1AP38606 617 aa17.5■□□□□ 0.39
SNX15-201ENST00000352068 VEGFBP49765 207 aa17.5■□□□□ 0.39
SNX15-201ENST00000352068 ITPK1Q13572 414 aa17.5■□□□□ 0.39
SNX15-201ENST00000352068 DPY19L2Q6NUT2 758 aa17.49■□□□□ 0.39
SNX15-201ENST00000352068 HDGFL2Q7Z4V5 671 aaPredicted RBP17.49■□□□□ 0.39
SNX15-201ENST00000352068 MAP3K19Q56UN5 1328 aa17.48■□□□□ 0.39
SNX15-201ENST00000352068 EDC4Q6P2E9 1401 aaKnown RBP17.48■□□□□ 0.39
SNX15-201ENST00000352068 CYP27B1O15528 508 aa17.48■□□□□ 0.39
SNX15-201ENST00000352068 RASSF7Q02833 373 aa17.48■□□□□ 0.39
SNX15-201ENST00000352068 ARHGEF1Q92888 912 aaKnown RBP17.48■□□□□ 0.39
SNX15-201ENST00000352068 VIRMAQ69YN4 1812 aaKnown RBP17.48■□□□□ 0.39
SNX15-201ENST00000352068 RAB3GAP2Q9H2M9 1393 aa17.47■□□□□ 0.39
SNX15-201ENST00000352068 RFC4P35249 363 aa17.46■□□□□ 0.39
SNX15-201ENST00000352068 USHBP1Q8N6Y0 703 aa17.46■□□□□ 0.39
SNX15-201ENST00000352068 CHRNA5P30532 468 aa17.45■□□□□ 0.38
SNX15-201ENST00000352068 CCDC88AQ3V6T2 1871 aa17.45■□□□□ 0.38
SNX15-201ENST00000352068 MAP2K1Q02750 393 aaPredicted RBP17.44■□□□□ 0.38
SNX15-201ENST00000352068 NKX1-1Q15270 411 aaPredicted RBP17.44■□□□□ 0.38
SNX15-201ENST00000352068 RC3H1Q5TC82 1133 aaKnown RBP17.44■□□□□ 0.38
SNX15-201ENST00000352068 TIAM2Q8IVF5 1701 aa17.44■□□□□ 0.38
SNX15-201ENST00000352068 TMEM88BA6NKF7 163 aa17.43■□□□□ 0.38
SNX15-201ENST00000352068 TMC1Q8TDI8 760 aa17.43■□□□□ 0.38
SNX15-201ENST00000352068 TMOD3Q9NYL9 352 aa17.43■□□□□ 0.38
SNX15-201ENST00000352068 ASAP1Q9ULH1 1129 aa17.43■□□□□ 0.38
SNX15-201ENST00000352068 PASKQ96RG2 1323 aa17.43■□□□□ 0.38
SNX15-201ENST00000352068 RTL1A6NKG5 1358 aa17.42■□□□□ 0.38
SNX15-201ENST00000352068 SMG6Q86US8 1419 aaKnown RBP17.42■□□□□ 0.38
SNX15-201ENST00000352068 TERF2IPQ9NYB0 399 aa17.42■□□□□ 0.38
SNX15-201ENST00000352068 COG3Q96JB2 828 aa17.41■□□□□ 0.38
SNX15-201ENST00000352068 RPS6KA4O75676 772 aa17.4■□□□□ 0.38
SNX15-201ENST00000352068 SLC12A5Q9H2X9 1139 aa17.4■□□□□ 0.38
SNX15-201ENST00000352068 FBLN1P23142 703 aa17.39■□□□□ 0.37
SNX15-201ENST00000352068 POTEIP0CG38 1075 aa17.38■□□□□ 0.37
SNX15-201ENST00000352068 POTEJP0CG39 1038 aa17.38■□□□□ 0.37
SNX15-201ENST00000352068 DEFB115Q30KQ5 88 aa17.38■□□□□ 0.37
SNX15-201ENST00000352068 CFAP44Q96MT7 982 aa17.38■□□□□ 0.37
SNX15-201ENST00000352068 ATG3Q9NT62 314 aa17.38■□□□□ 0.37
SNX15-201ENST00000352068 CNTNAP4Q9C0A0 1308 aa17.38■□□□□ 0.37
SNX15-201ENST00000352068 RASSF10A6NK89 507 aa17.37■□□□□ 0.37
SNX15-201ENST00000352068 DDR1Q08345 913 aa17.37■□□□□ 0.37
SNX15-201ENST00000352068 LDHDQ86WU2 507 aa17.37■□□□□ 0.37
SNX15-201ENST00000352068 ZNF831Q5JPB2 1677 aa17.36■□□□□ 0.37
SNX15-201ENST00000352068 A0A1W2PP64 1363 aa17.36■□□□□ 0.37
SNX15-201ENST00000352068 DICER1Q9UPY3 1922 aaKnown RBP17.35■□□□□ 0.37
SNX15-201ENST00000352068 NFKBIEO00221 500 aa17.35■□□□□ 0.37
SNX15-201ENST00000352068 FKBP8Q14318 412 aa17.35■□□□□ 0.37
SNX15-201ENST00000352068 TTLL6Q8N841 843 aa17.35■□□□□ 0.37
SNX15-201ENST00000352068 BEGAINQ9BUH8 593 aa17.35■□□□□ 0.37
SNX15-201ENST00000352068 SPG7Q9UQ90 795 aa17.35■□□□□ 0.37
SNX15-201ENST00000352068 WDR33Q9C0J8 1336 aaKnown RBP17.35■□□□□ 0.37
SNX15-201ENST00000352068 KDRP35968 1356 aa17.35■□□□□ 0.37
SNX15-201ENST00000352068 ITGBL1O95965 494 aaPredicted RBP17.34■□□□□ 0.37
SNX15-201ENST00000352068 ERFEQ4G0M1 354 aa17.34■□□□□ 0.37
SNX15-201ENST00000352068 IQCA1LA6NCM1 817 aa17.33■□□□□ 0.36
SNX15-201ENST00000352068 POLRMTO00411 1230 aaKnown RBP17.33■□□□□ 0.36
SNX15-201ENST00000352068 RRS1Q15050 365 aaKnown RBP17.33■□□□□ 0.36
SNX15-201ENST00000352068 SLC4A9Q96Q91 983 aa17.33■□□□□ 0.36
SNX15-201ENST00000352068 COL5A3P25940 1745 aaPredicted RBP17.33■□□□□ 0.36
SNX15-201ENST00000352068 USP42Q9H9J4 1324 aaKnown RBP17.32■□□□□ 0.36
SNX15-201ENST00000352068 MYH14Q7Z406 1995 aaKnown RBP17.32■□□□□ 0.36
SNX15-201ENST00000352068 TM4SF1P30408 202 aa17.32■□□□□ 0.36
SNX15-201ENST00000352068 RBM42Q9BTD8 480 aaKnown RBP17.32■□□□□ 0.36
SNX15-201ENST00000352068 INSRP06213 1382 aa17.31■□□□□ 0.36
SNX15-201ENST00000352068 DDNO94850 711 aaPredicted RBP17.31■□□□□ 0.36
SNX15-201ENST00000352068 SRP68Q9UHB9 627 aaKnown RBP17.31■□□□□ 0.36
SNX15-201ENST00000352068 ROCK2O75116 1388 aaKnown RBP17.3■□□□□ 0.36
SNX15-201ENST00000352068 PRPF38BQ5VTL8 546 aaKnown RBP17.3■□□□□ 0.36
SNX15-201ENST00000352068 MCOLN1Q9GZU1 580 aa17.3■□□□□ 0.36
SNX15-201ENST00000352068 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.3■□□□□ 0.36
SNX15-201ENST00000352068 DLEC1Q9Y238 1755 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms