RNA–Protein interactions for RNA: ENST00000351937.9

TRIM41-202, Transcript of tripartite motif containing 41, humanhuman

TSL 1 (best) BASIC

Gene TRIM41, Length 2,696 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-202ENST00000351937 PDZRN3Q9UPQ7 1066 aa23.34■■□□□ 1.33
TRIM41-202ENST00000351937 ADAMTS7Q9UKP4 1686 aa23.33■■□□□ 1.33
TRIM41-202ENST00000351937 MEGF6O75095 1541 aa23.33■■□□□ 1.32
TRIM41-202ENST00000351937 SMC5Q8IY18 1101 aa23.33■■□□□ 1.32
TRIM41-202ENST00000351937 G2E3Q7L622 706 aa23.32■■□□□ 1.32
TRIM41-202ENST00000351937 WDR17Q8IZU2 1322 aa23.31■■□□□ 1.32
TRIM41-202ENST00000351937 ABCA3Q99758 1704 aa23.31■■□□□ 1.32
TRIM41-202ENST00000351937 FAM161AQ3B820 660 aa23.31■■□□□ 1.32
TRIM41-202ENST00000351937 HDGFL1Q5TGJ6 251 aa23.3■■□□□ 1.32
TRIM41-202ENST00000351937 ERICH6Q7L0X2 663 aa23.3■■□□□ 1.32
TRIM41-202ENST00000351937 VIRMAQ69YN4 1812 aaKnown RBP23.3■■□□□ 1.32
TRIM41-202ENST00000351937 PHKG2P15735 406 aa23.3■■□□□ 1.32
TRIM41-202ENST00000351937 CACNA1FO60840 1977 aa23.3■■□□□ 1.32
TRIM41-202ENST00000351937 FLIIQ13045 1269 aa23.29■■□□□ 1.32
TRIM41-202ENST00000351937 IFNL2Q8IZJ0 200 aa23.29■■□□□ 1.32
TRIM41-202ENST00000351937 CCT4P50991 539 aaKnown RBP23.28■■□□□ 1.32
TRIM41-202ENST00000351937 KCNQ3O43525 872 aa23.28■■□□□ 1.32
TRIM41-202ENST00000351937 COL5A2P05997 1499 aaPredicted RBP23.28■■□□□ 1.32
TRIM41-202ENST00000351937 NECTIN2Q92692 538 aa23.27■■□□□ 1.32
TRIM41-202ENST00000351937 C1orf115Q9H7X2 142 aa23.27■■□□□ 1.32
TRIM41-202ENST00000351937 SIPA1L3O60292 1781 aaPredicted RBP23.27■■□□□ 1.32
TRIM41-202ENST00000351937 FKBP5Q13451 457 aaPredicted RBP23.26■■□□□ 1.31
TRIM41-202ENST00000351937 C8orf34Q49A92 452 aa23.26■■□□□ 1.31
TRIM41-202ENST00000351937 TOM1L2Q6ZVM7 507 aa23.26■■□□□ 1.31
TRIM41-202ENST00000351937 PKD1L3Q7Z443 1732 aa23.26■■□□□ 1.31
TRIM41-202ENST00000351937 GCC1Q96CN9 775 aa23.26■■□□□ 1.31
TRIM41-202ENST00000351937 LTBP4Q8N2S1 1624 aa23.25■■□□□ 1.31
TRIM41-202ENST00000351937 KDM6AO15550 1401 aaPredicted RBP23.25■■□□□ 1.31
TRIM41-202ENST00000351937 HEG1Q9ULI3 1381 aa23.25■■□□□ 1.31
TRIM41-202ENST00000351937 HSP90AB1P08238 724 aaKnown RBP23.25■■□□□ 1.31
TRIM41-202ENST00000351937 DCAF5Q96JK2 942 aa23.24■■□□□ 1.31
TRIM41-202ENST00000351937 SLC52A2Q9HAB3 445 aa23.24■■□□□ 1.31
TRIM41-202ENST00000351937 SCN11AQ9UI33 1791 aa23.24■■□□□ 1.31
TRIM41-202ENST00000351937 F6X3S4 739 aa23.24■■□□□ 1.31
TRIM41-202ENST00000351937 SIRT2Q8IXJ6 389 aa23.24■■□□□ 1.31
TRIM41-202ENST00000351937 SLC4A10Q6U841 1118 aa23.23■■□□□ 1.31
TRIM41-202ENST00000351937 CARD10Q9BWT7 1032 aa23.23■■□□□ 1.31
TRIM41-202ENST00000351937 ROBO1Q9Y6N7 1651 aa23.23■■□□□ 1.31
TRIM41-202ENST00000351937 CYP27B1O15528 508 aa23.23■■□□□ 1.31
TRIM41-202ENST00000351937 EIF2S2P20042 333 aaKnown RBP23.23■■□□□ 1.31
TRIM41-202ENST00000351937 NUCB1Q02818 461 aa23.23■■□□□ 1.31
TRIM41-202ENST00000351937 ANP32AP39687 249 aaKnown RBP23.22■■□□□ 1.31
TRIM41-202ENST00000351937 GIGYF1O75420 1035 aaPredicted RBP23.22■■□□□ 1.31
TRIM41-202ENST00000351937 AHDC1Q5TGY3 1603 aaPredicted RBP23.21■■□□□ 1.31
TRIM41-202ENST00000351937 RPAP2Q8IXW5 612 aaPredicted RBP23.21■■□□□ 1.31
TRIM41-202ENST00000351937 PARP4Q9UKK3 1724 aaKnown RBP23.2■■□□□ 1.3
TRIM41-202ENST00000351937 PXDNLA1KZ92 1463 aa23.2■■□□□ 1.3
TRIM41-202ENST00000351937 EVA1CP58658 441 aa23.2■■□□□ 1.3
TRIM41-202ENST00000351937 MEIS3Q99687 375 aa23.2■■□□□ 1.3
TRIM41-202ENST00000351937 ANKRD44Q8N8A2 993 aa23.19■■□□□ 1.3
TRIM41-202ENST00000351937 ZNF790Q6PG37 636 aa23.19■■□□□ 1.3
TRIM41-202ENST00000351937 NFATC2IPQ8NCF5 419 aa23.19■■□□□ 1.3
TRIM41-202ENST00000351937 CHPF2Q9P2E5 772 aa23.19■■□□□ 1.3
TRIM41-202ENST00000351937 NOP58Q9Y2X3 529 aaKnown RBP23.19■■□□□ 1.3
TRIM41-202ENST00000351937 MRC1P22897 1456 aa23.19■■□□□ 1.3
TRIM41-202ENST00000351937 PHAXQ9H814 394 aaKnown RBP23.18■■□□□ 1.3
TRIM41-202ENST00000351937 DBF4Q9UBU7 674 aaPredicted RBP23.18■■□□□ 1.3
TRIM41-202ENST00000351937 ATP10DQ9P241 1426 aa23.18■■□□□ 1.3
TRIM41-202ENST00000351937 CHD1LQ86WJ1 897 aa23.18■■□□□ 1.3
TRIM41-202ENST00000351937 ZCRB1Q8TBF4 217 aaKnown RBP23.18■■□□□ 1.3
TRIM41-202ENST00000351937 PCDH11XQ9BZA7 1347 aa23.18■■□□□ 1.3
TRIM41-202ENST00000351937 PCDH11YQ9BZA8 1340 aa23.18■■□□□ 1.3
TRIM41-202ENST00000351937 IPO9Q96P70 1041 aaKnown RBP23.17■■□□□ 1.3
TRIM41-202ENST00000351937 IL2RBP14784 551 aa23.17■■□□□ 1.3
TRIM41-202ENST00000351937 LARP1Q6PKG0 1096 aaKnown RBP23.17■■□□□ 1.3
TRIM41-202ENST00000351937 STRN4Q9NRL3 753 aa23.17■■□□□ 1.3
TRIM41-202ENST00000351937 CEP85Q6P2H3 762 aa23.16■■□□□ 1.3
TRIM41-202ENST00000351937 GNAI3P08754 354 aa23.15■■□□□ 1.3
TRIM41-202ENST00000351937 DCTPP1Q9H773 170 aa23.15■■□□□ 1.3
TRIM41-202ENST00000351937 COL22A1Q8NFW1 1626 aaPredicted RBP23.15■■□□□ 1.3
TRIM41-202ENST00000351937 N4BP2Q86UW6 1770 aaPredicted RBP23.14■■□□□ 1.3
TRIM41-202ENST00000351937 ANKRD45Q5TZF3 282 aa23.14■■□□□ 1.29
TRIM41-202ENST00000351937 GNAI2P04899 355 aa23.13■■□□□ 1.29
TRIM41-202ENST00000351937 SLC39A6Q13433 755 aa23.13■■□□□ 1.29
TRIM41-202ENST00000351937 LNPKQ9C0E8 428 aa23.13■■□□□ 1.29
TRIM41-202ENST00000351937 CABP4P57796 275 aa23.13■■□□□ 1.29
TRIM41-202ENST00000351937 NPM2Q86SE8 214 aaKnown RBP23.12■■□□□ 1.29
TRIM41-202ENST00000351937 BTG4Q9NY30 223 aa23.12■■□□□ 1.29
TRIM41-202ENST00000351937 NKX1-1Q15270 411 aaPredicted RBP23.11■■□□□ 1.29
TRIM41-202ENST00000351937 HYPKQ9NX55 129 aa23.11■■□□□ 1.29
TRIM41-202ENST00000351937 PRAMEF22A3QJZ6 481 aa23.11■■□□□ 1.29
TRIM41-202ENST00000351937 HMMRO75330 724 aa23.11■■□□□ 1.29
TRIM41-202ENST00000351937 TTC5Q8N0Z6 440 aa23.11■■□□□ 1.29
TRIM41-202ENST00000351937 COL14A1Q05707 1796 aaKnown RBP23.1■■□□□ 1.29
TRIM41-202ENST00000351937 PRKCSHP14314 528 aaPredicted RBP23.1■■□□□ 1.29
TRIM41-202ENST00000351937 DNAAF4Q8WXU2 420 aa23.1■■□□□ 1.29
TRIM41-202ENST00000351937 PI4KAP2A4QPH2 592 aa23.09■■□□□ 1.29
TRIM41-202ENST00000351937 ERVV-2B6SEH9 535 aa23.09■■□□□ 1.29
TRIM41-202ENST00000351937 PI4KAP1Q8N8J0 262 aa23.09■■□□□ 1.29
TRIM41-202ENST00000351937 SRCIN1Q9C0H9 1055 aa23.09■■□□□ 1.29
TRIM41-202ENST00000351937 DDX21Q9NR30 783 aaKnown RBP eCLIP23.09■■□□□ 1.29
TRIM41-202ENST00000351937 ANXA1P04083 346 aa23.08■■□□□ 1.29
TRIM41-202ENST00000351937 ZNF496Q96IT1 587 aaPredicted RBP23.08■■□□□ 1.29
TRIM41-202ENST00000351937 FMNL2Q96PY5 1086 aa23.08■■□□□ 1.29
TRIM41-202ENST00000351937 USP44Q9H0E7 712 aa23.08■■□□□ 1.29
TRIM41-202ENST00000351937 SNRPA1P09661 255 aaKnown RBP23.07■■□□□ 1.28
TRIM41-202ENST00000351937 ZBTB47Q9UFB7 747 aaPredicted RBP23.07■■□□□ 1.28
TRIM41-202ENST00000351937 ADCY9O60503 1353 aa23.07■■□□□ 1.28
TRIM41-202ENST00000351937 PROSER3Q2NL68 480 aa23.06■■□□□ 1.28
TRIM41-202ENST00000351937 BEND3Q5T5X7 828 aa23.06■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms