RNA–Protein interactions for RNA: ENST00000350034.4

TRIM55-203, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,177 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-203ENST00000350034 LGR6Q9HBX8 967 aa8.76□□□□□ -1.01
TRIM55-203ENST00000350034 ADAMTS7Q9UKP4 1686 aa8.75□□□□□ -1.01
TRIM55-203ENST00000350034 SLC4A2P04920 1241 aa8.75□□□□□ -1.01
TRIM55-203ENST00000350034 HOXB7P09629 217 aa8.75□□□□□ -1.01
TRIM55-203ENST00000350034 EIF4A1P60842 406 aaKnown RBP8.75□□□□□ -1.01
TRIM55-203ENST00000350034 CCDC30Q5VVM6 783 aa8.75□□□□□ -1.01
TRIM55-203ENST00000350034 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.75□□□□□ -1.01
TRIM55-203ENST00000350034 FAM208AQ9UK61 1670 aaKnown RBP8.75□□□□□ -1.01
TRIM55-203ENST00000350034 HEG1Q9ULI3 1381 aa8.74□□□□□ -1.01
TRIM55-203ENST00000350034 RGPD2P0DJD1 1756 aa8.74□□□□□ -1.01
TRIM55-203ENST00000350034 NHSL1Q5SYE7 1610 aa8.74□□□□□ -1.01
TRIM55-203ENST00000350034 G2E3Q7L622 706 aa8.74□□□□□ -1.01
TRIM55-203ENST00000350034 SIRT2Q8IXJ6 389 aa8.74□□□□□ -1.01
TRIM55-203ENST00000350034 CABLES1Q8TDN4 633 aa8.74□□□□□ -1.01
TRIM55-203ENST00000350034 NUCB1Q02818 461 aa8.73□□□□□ -1.01
TRIM55-203ENST00000350034 C1orf141Q5JVX7 400 aa8.73□□□□□ -1.01
TRIM55-203ENST00000350034 ATP10DQ9P241 1426 aa8.72□□□□□ -1.01
TRIM55-203ENST00000350034 KDM3BQ7LBC6 1761 aa8.72□□□□□ -1.01
TRIM55-203ENST00000350034 PLEKHG5O94827 1062 aa8.72□□□□□ -1.01
TRIM55-203ENST00000350034 ANP32AP39687 249 aaKnown RBP8.72□□□□□ -1.01
TRIM55-203ENST00000350034 CCT4P50991 539 aaKnown RBP8.72□□□□□ -1.01
TRIM55-203ENST00000350034 MPRIPQ6WCQ1 1025 aa8.72□□□□□ -1.01
TRIM55-203ENST00000350034 GCC1Q96CN9 775 aa8.72□□□□□ -1.01
TRIM55-203ENST00000350034 IPO9Q96P70 1041 aaKnown RBP8.72□□□□□ -1.01
TRIM55-203ENST00000350034 STK31Q9BXU1 1019 aa8.72□□□□□ -1.01
TRIM55-203ENST00000350034 CHMP4AQ9BY43 222 aa8.72□□□□□ -1.01
TRIM55-203ENST00000350034 NLRP2Q9NX02 1062 aa8.72□□□□□ -1.01
TRIM55-203ENST00000350034 MEGF6O75095 1541 aa8.71□□□□□ -1.01
TRIM55-203ENST00000350034 KCNQ3O43525 872 aa8.71□□□□□ -1.02
TRIM55-203ENST00000350034 TATP17735 454 aaPredicted RBP8.71□□□□□ -1.02
TRIM55-203ENST00000350034 TEFQ10587 303 aa8.71□□□□□ -1.02
TRIM55-203ENST00000350034 FLIIQ13045 1269 aa8.71□□□□□ -1.02
TRIM55-203ENST00000350034 CHRNA2Q15822 529 aa8.71□□□□□ -1.02
TRIM55-203ENST00000350034 RPAP2Q8IXW5 612 aaPredicted RBP8.71□□□□□ -1.02
TRIM55-203ENST00000350034 ANKRD44Q8N8A2 993 aa8.71□□□□□ -1.02
TRIM55-203ENST00000350034 RAPGEF4Q8WZA2 1011 aa8.71□□□□□ -1.02
TRIM55-203ENST00000350034 KDM6AO15550 1401 aaPredicted RBP8.71□□□□□ -1.02
TRIM55-203ENST00000350034 PXDNLA1KZ92 1463 aa8.7□□□□□ -1.02
TRIM55-203ENST00000350034 BTBD11A6QL63 1104 aa8.7□□□□□ -1.02
TRIM55-203ENST00000350034 PHKG2P15735 406 aa8.7□□□□□ -1.02
TRIM55-203ENST00000350034 HDGFL1Q5TGJ6 251 aa8.7□□□□□ -1.02
TRIM55-203ENST00000350034 CHD1LQ86WJ1 897 aa8.7□□□□□ -1.02
TRIM55-203ENST00000350034 MEIS3Q99687 375 aa8.7□□□□□ -1.02
TRIM55-203ENST00000350034 DCTPP1Q9H773 170 aa8.7□□□□□ -1.02
TRIM55-203ENST00000350034 C1orf115Q9H7X2 142 aa8.7□□□□□ -1.02
TRIM55-203ENST00000350034 SPG7Q9UQ90 795 aa8.7□□□□□ -1.02
TRIM55-203ENST00000350034 RGPD5Q99666 1765 aa8.7□□□□□ -1.02
TRIM55-203ENST00000350034 MRC1P22897 1456 aa8.7□□□□□ -1.02
TRIM55-203ENST00000350034 F6X3S4 739 aa8.69□□□□□ -1.02
TRIM55-203ENST00000350034 GIGYF1O75420 1035 aaPredicted RBP8.69□□□□□ -1.02
TRIM55-203ENST00000350034 CEP85Q6P2H3 762 aa8.69□□□□□ -1.02
TRIM55-203ENST00000350034 WDR17Q8IZU2 1322 aa8.69□□□□□ -1.02
TRIM55-203ENST00000350034 CYP27B1O15528 508 aa8.68□□□□□ -1.02
TRIM55-203ENST00000350034 CSB-PGBD3P0DP91 1061 aa8.68□□□□□ -1.02
TRIM55-203ENST00000350034 IFNL2Q8IZJ0 200 aa8.68□□□□□ -1.02
TRIM55-203ENST00000350034 SLC52A2Q9HAB3 445 aa8.68□□□□□ -1.02
TRIM55-203ENST00000350034 PRDM11Q9NQV5 511 aa8.68□□□□□ -1.02
TRIM55-203ENST00000350034 COL5A2P05997 1499 aaPredicted RBP8.68□□□□□ -1.02
TRIM55-203ENST00000350034 PKD1L3Q7Z443 1732 aa8.68□□□□□ -1.02
TRIM55-203ENST00000350034 SIPA1L3O60292 1781 aaPredicted RBP8.68□□□□□ -1.02
TRIM55-203ENST00000350034 HSP90AB1P08238 724 aaKnown RBP8.67□□□□□ -1.02
TRIM55-203ENST00000350034 C1QTNF8P60827 252 aa8.67□□□□□ -1.02
TRIM55-203ENST00000350034 CACNB1Q02641 598 aaPredicted RBP8.67□□□□□ -1.02
TRIM55-203ENST00000350034 FKBP5Q13451 457 aaPredicted RBP8.67□□□□□ -1.02
TRIM55-203ENST00000350034 DCAF5Q96JK2 942 aa8.67□□□□□ -1.02
TRIM55-203ENST00000350034 CARD10Q9BWT7 1032 aa8.67□□□□□ -1.02
TRIM55-203ENST00000350034 LNPKQ9C0E8 428 aa8.67□□□□□ -1.02
TRIM55-203ENST00000350034 PHAXQ9H814 394 aaKnown RBP8.67□□□□□ -1.02
TRIM55-203ENST00000350034 ABCA3Q99758 1704 aa8.66□□□□□ -1.02
TRIM55-203ENST00000350034 IBTKQ9P2D0 1353 aaPredicted RBP8.66□□□□□ -1.02
TRIM55-203ENST00000350034 GNAI3P08754 354 aa8.66□□□□□ -1.02
TRIM55-203ENST00000350034 NKX1-1Q15270 411 aaPredicted RBP8.66□□□□□ -1.02
TRIM55-203ENST00000350034 ANKRD45Q5TZF3 282 aa8.66□□□□□ -1.02
TRIM55-203ENST00000350034 ZNF772Q68DY9 489 aaPredicted RBP8.66□□□□□ -1.02
TRIM55-203ENST00000350034 SLC4A10Q6U841 1118 aa8.66□□□□□ -1.02
TRIM55-203ENST00000350034 NECTIN2Q92692 538 aa8.66□□□□□ -1.02
TRIM55-203ENST00000350034 CHPF2Q9P2E5 772 aa8.66□□□□□ -1.02
TRIM55-203ENST00000350034 DBF4Q9UBU7 674 aaPredicted RBP8.66□□□□□ -1.02
TRIM55-203ENST00000350034 NOP58Q9Y2X3 529 aaKnown RBP8.66□□□□□ -1.02
TRIM55-203ENST00000350034 CACNA1FO60840 1977 aa8.66□□□□□ -1.02
TRIM55-203ENST00000350034 N4BP2Q86UW6 1770 aaPredicted RBP8.66□□□□□ -1.02
TRIM55-203ENST00000350034 AHDC1Q5TGY3 1603 aaPredicted RBP8.65□□□□□ -1.02
TRIM55-203ENST00000350034 ADCY9O60503 1353 aa8.65□□□□□ -1.02
TRIM55-203ENST00000350034 SEC24BO95487 1268 aa8.65□□□□□ -1.02
TRIM55-203ENST00000350034 GNAI2P04899 355 aa8.65□□□□□ -1.02
TRIM55-203ENST00000350034 EIF2S2P20042 333 aaKnown RBP8.65□□□□□ -1.02
TRIM55-203ENST00000350034 ATP8B2P98198 1209 aa8.65□□□□□ -1.02
TRIM55-203ENST00000350034 PDIA6Q15084 440 aa8.65□□□□□ -1.02
TRIM55-203ENST00000350034 BMP2KLQ5H9B9 411 aa8.65□□□□□ -1.02
TRIM55-203ENST00000350034 BEND3Q5T5X7 828 aa8.65□□□□□ -1.02
TRIM55-203ENST00000350034 ZNF790Q6PG37 636 aa8.65□□□□□ -1.02
TRIM55-203ENST00000350034 NPM2Q86SE8 214 aaKnown RBP8.65□□□□□ -1.02
TRIM55-203ENST00000350034 DDRGK1Q96HY6 314 aa8.65□□□□□ -1.02
TRIM55-203ENST00000350034 USP44Q9H0E7 712 aa8.65□□□□□ -1.02
TRIM55-203ENST00000350034 SCN11AQ9UI33 1791 aa8.65□□□□□ -1.02
TRIM55-203ENST00000350034 PARP4Q9UKK3 1724 aaKnown RBP8.64□□□□□ -1.03
TRIM55-203ENST00000350034 HMMRO75330 724 aa8.64□□□□□ -1.03
TRIM55-203ENST00000350034 TOM1L2Q6ZVM7 507 aa8.64□□□□□ -1.03
TRIM55-203ENST00000350034 NFATC2IPQ8NCF5 419 aa8.64□□□□□ -1.03
TRIM55-203ENST00000350034 ZCRB1Q8TBF4 217 aaKnown RBP8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms