RNA–Protein interactions for RNA: ENST00000349703.6

RFC1-201, Transcript of replication factor C subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RFC1, Length 4,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-201ENST00000349703 CLCN6P51797 869 aa7.19□□□□□ -1.26
RFC1-201ENST00000349703 LRGUKQ96M69 825 aa7.19□□□□□ -1.26
RFC1-201ENST00000349703 PTK2Q05397 1052 aa7.19□□□□□ -1.26
RFC1-201ENST00000349703 BIRC3Q13489 604 aa7.19□□□□□ -1.26
RFC1-201ENST00000349703 ZNF513Q8N8E2 541 aaPredicted RBP7.19□□□□□ -1.26
RFC1-201ENST00000349703 CHIC2Q9UKJ5 165 aa7.19□□□□□ -1.26
RFC1-201ENST00000349703 TAF12Q16514 161 aa7.18□□□□□ -1.26
RFC1-201ENST00000349703 SNAP47Q5SQN1 464 aa7.18□□□□□ -1.26
RFC1-201ENST00000349703 EXOC6Q8TAG9 804 aa7.18□□□□□ -1.26
RFC1-201ENST00000349703 MTMR8Q96EF0 704 aa7.18□□□□□ -1.26
RFC1-201ENST00000349703 ARHGAP9Q9BRR9 750 aa7.18□□□□□ -1.26
RFC1-201ENST00000349703 NDUFV2P19404 249 aa7.18□□□□□ -1.26
RFC1-201ENST00000349703 C21orf62-AS1Q17RA5 79 aa7.18□□□□□ -1.26
RFC1-201ENST00000349703 ZNF622Q969S3 477 aaKnown RBP eCLIP7.18□□□□□ -1.261e-7■■□□□ 14.5
RFC1-201ENST00000349703 MYBBP1AQ9BQG0 1328 aaKnown RBP7.18□□□□□ -1.26
RFC1-201ENST00000349703 AKNAQ7Z591 1439 aa7.18□□□□□ -1.26
RFC1-201ENST00000349703 NT5DC4Q86YG4 428 aa7.18□□□□□ -1.26
RFC1-201ENST00000349703 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.18□□□□□ -1.26
RFC1-201ENST00000349703 A0A1W2PQJ5 194 aa7.18□□□□□ -1.26
RFC1-201ENST00000349703 SMAPO00193 183 aa7.18□□□□□ -1.26
RFC1-201ENST00000349703 TPM2P07951 284 aa7.18□□□□□ -1.26
RFC1-201ENST00000349703 TIGD1Q96MW7 591 aa7.18□□□□□ -1.26
RFC1-201ENST00000349703 EPAS1Q99814 870 aa7.18□□□□□ -1.26
RFC1-201ENST00000349703 FGD6Q6ZV73 1430 aa7.17□□□□□ -1.26
RFC1-201ENST00000349703 NUTM2GQ5VZR2 741 aa7.17□□□□□ -1.26
RFC1-201ENST00000349703 PADI6Q6TGC4 694 aa7.17□□□□□ -1.26
RFC1-201ENST00000349703 HFM1A2PYH4 1435 aa7.17□□□□□ -1.26
RFC1-201ENST00000349703 NEK4P51957 841 aa7.17□□□□□ -1.26
RFC1-201ENST00000349703 RNF20Q5VTR2 975 aa7.17□□□□□ -1.26
RFC1-201ENST00000349703 CCDC91Q7Z6B0 441 aa7.17□□□□□ -1.26
RFC1-201ENST00000349703 ADAT2Q7Z6V5 191 aaKnown RBP7.17□□□□□ -1.26
RFC1-201ENST00000349703 IFNL1Q8IU54 200 aa7.17□□□□□ -1.26
RFC1-201ENST00000349703 SSU72P8A0A1W2PR75 194 aa7.17□□□□□ -1.26
RFC1-201ENST00000349703 GBP2P32456 591 aaPredicted RBP7.17□□□□□ -1.26
RFC1-201ENST00000349703 OGFOD1Q8N543 542 aa7.17□□□□□ -1.26
RFC1-201ENST00000349703 RBSNQ9H1K0 784 aa7.17□□□□□ -1.26
RFC1-201ENST00000349703 ST7Q9NRC1 585 aa7.17□□□□□ -1.26
RFC1-201ENST00000349703 MSNP26038 577 aaKnown RBP7.17□□□□□ -1.26
RFC1-201ENST00000349703 PHF20L1A8MW92 1017 aa7.16□□□□□ -1.26
RFC1-201ENST00000349703 PPFIA3O75145 1194 aa7.16□□□□□ -1.26
RFC1-201ENST00000349703 SCNN1AP37088 669 aa7.16□□□□□ -1.26
RFC1-201ENST00000349703 RGS3P49796 1198 aa7.16□□□□□ -1.26
RFC1-201ENST00000349703 SKIDA1Q1XH10 827 aa7.16□□□□□ -1.26
RFC1-201ENST00000349703 Q3C1V9 767 aa7.16□□□□□ -1.26
RFC1-201ENST00000349703 NBPF14Q5TI25 921 aa7.16□□□□□ -1.26
RFC1-201ENST00000349703 SLAIN1Q8ND83 568 aa7.16□□□□□ -1.26
RFC1-201ENST00000349703 RGS22Q8NE09 1264 aa7.16□□□□□ -1.26
RFC1-201ENST00000349703 JARID2Q92833 1246 aaPredicted RBP7.16□□□□□ -1.26
RFC1-201ENST00000349703 PAGR1Q9BTK6 254 aa7.16□□□□□ -1.26
RFC1-201ENST00000349703 FAM86C1Q9NVL1 165 aa7.16□□□□□ -1.26
RFC1-201ENST00000349703 FYCO1Q9BQS8 1478 aa7.16□□□□□ -1.26
RFC1-201ENST00000349703 SEC13P55735 322 aa7.16□□□□□ -1.26
RFC1-201ENST00000349703 HS2ST1Q7LGA3 356 aa7.16□□□□□ -1.26
RFC1-201ENST00000349703 MAP7D2Q96T17 732 aa7.16□□□□□ -1.26
RFC1-201ENST00000349703 GPN3Q9UHW5 284 aaPredicted RBP7.16□□□□□ -1.26
RFC1-201ENST00000349703 BRD4O60885 1362 aaPredicted RBP7.16□□□□□ -1.26
RFC1-201ENST00000349703 EIF4BP23588 611 aaKnown RBP7.16□□□□□ -1.26
RFC1-201ENST00000349703 L3MBTL2Q969R5 705 aa7.16□□□□□ -1.26
RFC1-201ENST00000349703 MPHOSPH9Q99550 1183 aa7.16□□□□□ -1.26
RFC1-201ENST00000349703 CABP1Q9NZU7 370 aa7.16□□□□□ -1.26
RFC1-201ENST00000349703 DPYDQ12882 1025 aa7.16□□□□□ -1.26
RFC1-201ENST00000349703 IRF5Q13568 498 aa7.16□□□□□ -1.26
RFC1-201ENST00000349703 NLRP13Q86W25 1043 aa7.16□□□□□ -1.26
RFC1-201ENST00000349703 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.16□□□□□ -1.26
RFC1-201ENST00000349703 ARMC2Q8NEN0 867 aa7.16□□□□□ -1.26
RFC1-201ENST00000349703 MAGED2Q9UNF1 606 aaPredicted RBP7.16□□□□□ -1.26
RFC1-201ENST00000349703 USP17L5A8MUK1 530 aa7.15□□□□□ -1.26
RFC1-201ENST00000349703 MCM8Q9UJA3 840 aa7.15□□□□□ -1.26
RFC1-201ENST00000349703 DSG2Q14126 1118 aa7.15□□□□□ -1.26
RFC1-201ENST00000349703 MYSM1Q5VVJ2 828 aa7.15□□□□□ -1.26
RFC1-201ENST00000349703 TMEM214Q6NUQ4 689 aaKnown RBP7.15□□□□□ -1.26
RFC1-201ENST00000349703 SPATA17Q96L03 361 aa7.15□□□□□ -1.26
RFC1-201ENST00000349703 CARD11Q9BXL7 1154 aa7.15□□□□□ -1.26
RFC1-201ENST00000349703 SRRTQ9BXP5 876 aaKnown RBP7.15□□□□□ -1.26
RFC1-201ENST00000349703 SCAMP3O14828 347 aaKnown RBP7.15□□□□□ -1.27
RFC1-201ENST00000349703 UPP2O95045 317 aa7.15□□□□□ -1.27
RFC1-201ENST00000349703 FOSP01100 380 aaPredicted RBP7.15□□□□□ -1.27
RFC1-201ENST00000349703 SLC9A5Q14940 896 aa7.15□□□□□ -1.27
RFC1-201ENST00000349703 SLC27A3Q5K4L6 730 aa7.15□□□□□ -1.27
RFC1-201ENST00000349703 USP48Q86UV5 1035 aa7.15□□□□□ -1.27
RFC1-201ENST00000349703 CERKQ8TCT0 537 aa7.15□□□□□ -1.27
RFC1-201ENST00000349703 FAM161BQ96MY7 647 aa7.15□□□□□ -1.27
RFC1-201ENST00000349703 MAPK8IP3Q9UPT6 1336 aa7.15□□□□□ -1.27
RFC1-201ENST00000349703 PDE1CQ14123 709 aaPredicted RBP7.15□□□□□ -1.27
RFC1-201ENST00000349703 WAPLQ7Z5K2 1190 aa7.15□□□□□ -1.27
RFC1-201ENST00000349703 PLSCR2Q9NRY7 297 aa7.15□□□□□ -1.27
RFC1-201ENST00000349703 KIF7Q2M1P5 1343 aa7.14□□□□□ -1.27
RFC1-201ENST00000349703 EIF3AQ14152 1382 aaKnown RBP7.14□□□□□ -1.27
RFC1-201ENST00000349703 NCOA2Q15596 1464 aa7.14□□□□□ -1.27
RFC1-201ENST00000349703 MOXD2PA6NHM9 499 aa7.14□□□□□ -1.27
RFC1-201ENST00000349703 FECHP22830 423 aa7.14□□□□□ -1.27
RFC1-201ENST00000349703 ITKQ08881 620 aa7.14□□□□□ -1.27
RFC1-201ENST00000349703 PHF12Q96QT6 1004 aa7.14□□□□□ -1.27
RFC1-201ENST00000349703 BOLA1Q9Y3E2 137 aa7.14□□□□□ -1.27
RFC1-201ENST00000349703 AFG3L2Q9Y4W6 797 aa7.14□□□□□ -1.27
RFC1-201ENST00000349703 GOLGA6CA6NDK9 693 aa7.14□□□□□ -1.27
RFC1-201ENST00000349703 GOLGA6BA6NDN3 693 aa7.14□□□□□ -1.27
RFC1-201ENST00000349703 GOLGA6DP0CG33 693 aa7.14□□□□□ -1.27
RFC1-201ENST00000349703 HSCBQ8IWL3 235 aa7.14□□□□□ -1.27
RFC1-201ENST00000349703 GBP4Q96PP9 640 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 98.1 ms