RNA–Protein interactions for RNA: ENST00000348264.6

CLCC1-202, Transcript of chloride channel CLIC like 1, humanhuman

TSL 1 (best) BASIC

Gene CLCC1, Length 1,124 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-202ENST00000348264 ITPK1Q13572 414 aa18■□□□□ 0.47
CLCC1-202ENST00000348264 C1orf141Q5JVX7 400 aa18■□□□□ 0.47
CLCC1-202ENST00000348264 MAP3K5Q99683 1374 aa18■□□□□ 0.47
CLCC1-202ENST00000348264 COL5A3P25940 1745 aaPredicted RBP18■□□□□ 0.47
CLCC1-202ENST00000348264 GOLGB1Q14789 3259 aaKnown RBP17.99■□□□□ 0.47
CLCC1-202ENST00000348264 MSH5O43196 834 aa17.99■□□□□ 0.47
CLCC1-202ENST00000348264 DIAPH1O60610 1272 aaKnown RBP17.99■□□□□ 0.47
CLCC1-202ENST00000348264 AK7Q96M32 723 aa17.99■□□□□ 0.47
CLCC1-202ENST00000348264 POLD1P28340 1107 aa17.98■□□□□ 0.47
CLCC1-202ENST00000348264 MSL1Q68DK7 614 aa17.98■□□□□ 0.47
CLCC1-202ENST00000348264 HMGB2P26583 209 aaKnown RBP17.97■□□□□ 0.47
CLCC1-202ENST00000348264 ATP6V1AP38606 617 aa17.97■□□□□ 0.47
CLCC1-202ENST00000348264 CABP4P57796 275 aa17.97■□□□□ 0.47
CLCC1-202ENST00000348264 SMIM5Q71RC9 77 aa17.97■□□□□ 0.47
CLCC1-202ENST00000348264 SLC4A9Q96Q91 983 aa17.97■□□□□ 0.47
CLCC1-202ENST00000348264 ADAMTS7Q9UKP4 1686 aa17.96■□□□□ 0.47
CLCC1-202ENST00000348264 MRC1P22897 1456 aa17.96■□□□□ 0.47
CLCC1-202ENST00000348264 PHF14O94880 888 aa17.96■□□□□ 0.47
CLCC1-202ENST00000348264 MYH14Q7Z406 1995 aaKnown RBP17.96■□□□□ 0.47
CLCC1-202ENST00000348264 FLAD1Q8NFF5 587 aa17.95■□□□□ 0.46
CLCC1-202ENST00000348264 TJP1Q07157 1748 aa17.95■□□□□ 0.46
CLCC1-202ENST00000348264 CICQ96RK0 1608 aaPredicted RBP17.94■□□□□ 0.46
CLCC1-202ENST00000348264 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.94■□□□□ 0.46
CLCC1-202ENST00000348264 AKAP4Q5JQC9 854 aa17.94■□□□□ 0.46
CLCC1-202ENST00000348264 KLHL34Q8N239 644 aa17.94■□□□□ 0.46
CLCC1-202ENST00000348264 RBM42Q9BTD8 480 aaKnown RBP17.94■□□□□ 0.46
CLCC1-202ENST00000348264 DCAF8L1A6NGE4 600 aa17.93■□□□□ 0.46
CLCC1-202ENST00000348264 GNPATO15228 680 aa17.93■□□□□ 0.46
CLCC1-202ENST00000348264 SSFA2P28290 1259 aa17.93■□□□□ 0.46
CLCC1-202ENST00000348264 MTHFSDQ2M296 383 aaKnown RBP17.93■□□□□ 0.46
CLCC1-202ENST00000348264 NFATC2IPQ8NCF5 419 aa17.93■□□□□ 0.46
CLCC1-202ENST00000348264 U2SURPO15042 1029 aaKnown RBP17.92■□□□□ 0.46
CLCC1-202ENST00000348264 LGR6Q9HBX8 967 aa17.91■□□□□ 0.46
CLCC1-202ENST00000348264 C4AP0C0L4 1744 aa17.91■□□□□ 0.46
CLCC1-202ENST00000348264 CHD4Q14839 1912 aa17.9■□□□□ 0.46
CLCC1-202ENST00000348264 RNMTO43148 476 aaKnown RBP17.9■□□□□ 0.46
CLCC1-202ENST00000348264 PTCD1O75127 700 aaKnown RBP17.9■□□□□ 0.46
CLCC1-202ENST00000348264 PPP2R1AP30153 589 aa17.9■□□□□ 0.46
CLCC1-202ENST00000348264 NLGN2Q8NFZ4 835 aa17.9■□□□□ 0.46
CLCC1-202ENST00000348264 SLC52A2Q9HAB3 445 aa17.9■□□□□ 0.46
CLCC1-202ENST00000348264 CNTNAP4Q9C0A0 1308 aa17.89■□□□□ 0.45
CLCC1-202ENST00000348264 UBR2Q8IWV8 1755 aa17.89■□□□□ 0.45
CLCC1-202ENST00000348264 YY1P25490 414 aa17.88■□□□□ 0.45
CLCC1-202ENST00000348264 CFAP53Q96M91 514 aa17.88■□□□□ 0.45
CLCC1-202ENST00000348264 SIPA1L3O60292 1781 aaPredicted RBP17.88■□□□□ 0.45
CLCC1-202ENST00000348264 KCPQ6ZWJ8 1503 aa17.88■□□□□ 0.45
CLCC1-202ENST00000348264 RC3H1Q5TC82 1133 aaKnown RBP17.86■□□□□ 0.45
CLCC1-202ENST00000348264 RTCBQ9Y3I0 505 aaKnown RBP17.86■□□□□ 0.45
CLCC1-202ENST00000348264 SLC39A6Q13433 755 aa17.85■□□□□ 0.45
CLCC1-202ENST00000348264 RSPH6AQ9H0K4 717 aa17.85■□□□□ 0.45
CLCC1-202ENST00000348264 PRKAR2BP31323 418 aa17.84■□□□□ 0.45
CLCC1-202ENST00000348264 CRKLP46109 303 aaKnown RBP17.84■□□□□ 0.45
CLCC1-202ENST00000348264 RPS6KA4O75676 772 aa17.83■□□□□ 0.44
CLCC1-202ENST00000348264 GAS2L2Q8NHY3 880 aa17.83■□□□□ 0.44
CLCC1-202ENST00000348264 PHACTR3Q96KR7 559 aa17.83■□□□□ 0.44
CLCC1-202ENST00000348264 ADRA2BP18089 450 aa17.82■□□□□ 0.44
CLCC1-202ENST00000348264 GPR162Q16538 588 aa17.82■□□□□ 0.44
CLCC1-202ENST00000348264 TRAPPC3LQ5T215 181 aa17.82■□□□□ 0.44
CLCC1-202ENST00000348264 DNAJC10Q8IXB1 793 aa17.82■□□□□ 0.44
CLCC1-202ENST00000348264 PELP1Q8IZL8 1130 aaKnown RBP17.82■□□□□ 0.44
CLCC1-202ENST00000348264 ARHGEF1Q92888 912 aaKnown RBP17.82■□□□□ 0.44
CLCC1-202ENST00000348264 NUDCQ9Y266 331 aa17.82■□□□□ 0.44
CLCC1-202ENST00000348264 KIF13BQ9NQT8 1826 aa17.82■□□□□ 0.44
CLCC1-202ENST00000348264 GNAT3A8MTJ3 354 aa17.81■□□□□ 0.44
CLCC1-202ENST00000348264 U2AF1L5P0DN76 240 aaPredicted RBP17.81■□□□□ 0.44
CLCC1-202ENST00000348264 U2AF1Q01081 240 aaKnown RBP eCLIP17.81■□□□□ 0.44
CLCC1-202ENST00000348264 IL17REQ8NFR9 667 aa17.81■□□□□ 0.44
CLCC1-202ENST00000348264 CD2APQ9Y5K6 639 aa17.81■□□□□ 0.44
CLCC1-202ENST00000348264 MMP10P09238 476 aa17.8■□□□□ 0.44
CLCC1-202ENST00000348264 KIAA1551Q9HCM1 1747 aa17.8■□□□□ 0.44
CLCC1-202ENST00000348264 CEMIPQ8WUJ3 1361 aa17.79■□□□□ 0.44
CLCC1-202ENST00000348264 GYS1P13807 737 aa17.79■□□□□ 0.44
CLCC1-202ENST00000348264 YBX3P16989 372 aaKnown RBP eCLIP17.79■□□□□ 0.44
CLCC1-202ENST00000348264 INTS5Q6P9B9 1019 aaKnown RBP17.79■□□□□ 0.44
CLCC1-202ENST00000348264 RFC4P35249 363 aa17.78■□□□□ 0.44
CLCC1-202ENST00000348264 DLG5Q8TDM6 1919 aa17.78■□□□□ 0.44
CLCC1-202ENST00000348264 CYP19A1P11511 503 aaPredicted RBP17.77■□□□□ 0.44
CLCC1-202ENST00000348264 TEFQ10587 303 aa17.77■□□□□ 0.44
CLCC1-202ENST00000348264 CCDC87Q9NVE4 849 aa17.77■□□□□ 0.44
CLCC1-202ENST00000348264 SRP68Q9UHB9 627 aaKnown RBP17.77■□□□□ 0.44
CLCC1-202ENST00000348264 USP42Q9H9J4 1324 aaKnown RBP17.76■□□□□ 0.43
CLCC1-202ENST00000348264 C10orf71Q711Q0 1435 aa17.76■□□□□ 0.43
CLCC1-202ENST00000348264 FCHSD2O94868 740 aa17.76■□□□□ 0.43
CLCC1-202ENST00000348264 NLGN1Q8N2Q7 840 aa17.76■□□□□ 0.43
CLCC1-202ENST00000348264 N4BP2Q86UW6 1770 aaPredicted RBP17.76■□□□□ 0.43
CLCC1-202ENST00000348264 SOS1Q07889 1333 aaPredicted RBP17.75■□□□□ 0.43
CLCC1-202ENST00000348264 TTC5Q8N0Z6 440 aa17.75■□□□□ 0.43
CLCC1-202ENST00000348264 VSIG10Q8N0Z9 540 aa17.75■□□□□ 0.43
CLCC1-202ENST00000348264 ZBTB1Q9Y2K1 713 aa17.75■□□□□ 0.43
CLCC1-202ENST00000348264 ZNF790Q6PG37 636 aa17.74■□□□□ 0.43
CLCC1-202ENST00000348264 ZNF496Q96IT1 587 aaPredicted RBP17.74■□□□□ 0.43
CLCC1-202ENST00000348264 PXDNLA1KZ92 1463 aa17.74■□□□□ 0.43
CLCC1-202ENST00000348264 FKBP8Q14318 412 aa17.73■□□□□ 0.43
CLCC1-202ENST00000348264 WWC3Q9ULE0 1092 aa17.73■□□□□ 0.43
CLCC1-202ENST00000348264 COL15A1P39059 1388 aa17.73■□□□□ 0.43
CLCC1-202ENST00000348264 HEG1Q9ULI3 1381 aa17.73■□□□□ 0.43
CLCC1-202ENST00000348264 BRCA1P38398 1863 aaKnown RBP17.72■□□□□ 0.43
CLCC1-202ENST00000348264 DDX10Q13206 875 aaKnown RBP17.72■□□□□ 0.43
CLCC1-202ENST00000348264 MCM10Q7L590 875 aa17.72■□□□□ 0.43
CLCC1-202ENST00000348264 ZNF784Q8NCA9 323 aaPredicted RBP17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms