RNA–Protein interactions for RNA: ENST00000348259.9

MRPL55-204, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 2 BASIC

Gene MRPL55, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-204ENST00000348259 LOC102724428A0A0B4J2F2 783 aa13.41□□□□□ -0.26
MRPL55-204ENST00000348259 SIK1P57059 783 aa13.41□□□□□ -0.26
MRPL55-204ENST00000348259 EIF4G2P78344 907 aaKnown RBP eCLIP13.41□□□□□ -0.26
MRPL55-204ENST00000348259 AK7Q96M32 723 aa13.41□□□□□ -0.26
MRPL55-204ENST00000348259 PLEKHG2Q9H7P9 1386 aa13.41□□□□□ -0.26
MRPL55-204ENST00000348259 WDR90Q96KV7 1748 aa13.41□□□□□ -0.26
MRPL55-204ENST00000348259 DNAJC5GQ8N7S2 189 aa13.4□□□□□ -0.26
MRPL55-204ENST00000348259 CARD14Q9BXL6 1004 aa13.4□□□□□ -0.26
MRPL55-204ENST00000348259 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.4□□□□□ -0.26
MRPL55-204ENST00000348259 EMILIN1Q9Y6C2 1016 aa13.4□□□□□ -0.26
MRPL55-204ENST00000348259 ZNF526Q8TF50 670 aaPredicted RBP13.39□□□□□ -0.27
MRPL55-204ENST00000348259 ADAMTS7Q9UKP4 1686 aa13.39□□□□□ -0.27
MRPL55-204ENST00000348259 WASHC2AQ641Q2 1341 aa13.39□□□□□ -0.27
MRPL55-204ENST00000348259 PHF14O94880 888 aa13.38□□□□□ -0.27
MRPL55-204ENST00000348259 SLC4A9Q96Q91 983 aa13.38□□□□□ -0.27
MRPL55-204ENST00000348259 ASAP1Q9ULH1 1129 aa13.38□□□□□ -0.27
MRPL55-204ENST00000348259 SBF1O95248 1867 aa13.37□□□□□ -0.27
MRPL55-204ENST00000348259 HSPA5P11021 654 aaKnown RBP13.36□□□□□ -0.27
MRPL55-204ENST00000348259 PHKG2P15735 406 aa13.36□□□□□ -0.27
MRPL55-204ENST00000348259 EYA1Q99502 592 aa13.36□□□□□ -0.27
MRPL55-204ENST00000348259 ATG3Q9NT62 314 aa13.36□□□□□ -0.27
MRPL55-204ENST00000348259 WWC3Q9ULE0 1092 aa13.36□□□□□ -0.27
MRPL55-204ENST00000348259 GNPATO15228 680 aa13.35□□□□□ -0.27
MRPL55-204ENST00000348259 MMP10P09238 476 aa13.35□□□□□ -0.27
MRPL55-204ENST00000348259 TGFB2P61812 414 aa13.35□□□□□ -0.27
MRPL55-204ENST00000348259 TMF1P82094 1093 aa13.35□□□□□ -0.27
MRPL55-204ENST00000348259 TJP1Q07157 1748 aa13.35□□□□□ -0.27
MRPL55-204ENST00000348259 TOMM70O94826 608 aa13.34□□□□□ -0.27
MRPL55-204ENST00000348259 APLP1P51693 650 aa13.34□□□□□ -0.27
MRPL55-204ENST00000348259 TMOD3Q9NYL9 352 aa13.34□□□□□ -0.27
MRPL55-204ENST00000348259 SPG7Q9UQ90 795 aa13.34□□□□□ -0.27
MRPL55-204ENST00000348259 KDM6AO15550 1401 aaPredicted RBP13.33□□□□□ -0.28
MRPL55-204ENST00000348259 KCNA3P22001 575 aa13.33□□□□□ -0.28
MRPL55-204ENST00000348259 ATP6V1AP38606 617 aa13.33□□□□□ -0.28
MRPL55-204ENST00000348259 RC3H1Q5TC82 1133 aaKnown RBP13.33□□□□□ -0.28
MRPL55-204ENST00000348259 CNTNAP4Q9C0A0 1308 aa13.33□□□□□ -0.28
MRPL55-204ENST00000348259 TNRC6CQ9HCJ0 1690 aaKnown RBP13.32□□□□□ -0.28
MRPL55-204ENST00000348259 GYS1P13807 737 aa13.32□□□□□ -0.28
MRPL55-204ENST00000348259 IFNL2Q8IZJ0 200 aa13.32□□□□□ -0.28
MRPL55-204ENST00000348259 POLKQ9UBT6 870 aa13.32□□□□□ -0.28
MRPL55-204ENST00000348259 NRXN2Q9P2S2 1712 aa13.31□□□□□ -0.28
MRPL55-204ENST00000348259 ADRA2BP18089 450 aa13.31□□□□□ -0.28
MRPL55-204ENST00000348259 NLGN1Q8N2Q7 840 aa13.31□□□□□ -0.28
MRPL55-204ENST00000348259 NMRK2Q9NPI5 230 aa13.31□□□□□ -0.28
MRPL55-204ENST00000348259 SCN11AQ9UI33 1791 aa13.3□□□□□ -0.28
MRPL55-204ENST00000348259 DLEC1Q9Y238 1755 aa13.3□□□□□ -0.28
MRPL55-204ENST00000348259 A0A0G2JLW4 131 aa13.3□□□□□ -0.28
MRPL55-204ENST00000348259 DPEP1P16444 411 aa13.3□□□□□ -0.28
MRPL55-204ENST00000348259 ARHGEF1Q92888 912 aaKnown RBP13.3□□□□□ -0.28
MRPL55-204ENST00000348259 ERVV-2B6SEH9 535 aa13.29□□□□□ -0.28
MRPL55-204ENST00000348259 RPS6KA4O75676 772 aa13.29□□□□□ -0.28
MRPL55-204ENST00000348259 EIF4A2Q14240 407 aaKnown RBP13.29□□□□□ -0.28
MRPL55-204ENST00000348259 CDCA8Q53HL2 280 aa13.29□□□□□ -0.28
MRPL55-204ENST00000348259 JMYQ8N9B5 988 aa13.29□□□□□ -0.28
MRPL55-204ENST00000348259 RTCBQ9Y3I0 505 aaKnown RBP13.29□□□□□ -0.28
MRPL55-204ENST00000348259 AFDNP55196 1824 aaKnown RBP13.29□□□□□ -0.28
MRPL55-204ENST00000348259 VIRMAQ69YN4 1812 aaKnown RBP13.28□□□□□ -0.28
MRPL55-204ENST00000348259 TRAPPC3LQ5T215 181 aa13.28□□□□□ -0.28
MRPL55-204ENST00000348259 RBM46Q8TBY0 533 aaKnown RBP13.28□□□□□ -0.28
MRPL55-204ENST00000348259 BCS1LQ9Y276 419 aa13.28□□□□□ -0.28
MRPL55-204ENST00000348259 KCPQ6ZWJ8 1503 aa13.28□□□□□ -0.28
MRPL55-204ENST00000348259 DCAF5Q96JK2 942 aa13.27□□□□□ -0.29
MRPL55-204ENST00000348259 DDR1Q08345 913 aa13.26□□□□□ -0.29
MRPL55-204ENST00000348259 CCDC87Q9NVE4 849 aa13.26□□□□□ -0.29
MRPL55-204ENST00000348259 USP42Q9H9J4 1324 aaKnown RBP13.25□□□□□ -0.29
MRPL55-204ENST00000348259 DDX10Q13206 875 aaKnown RBP13.25□□□□□ -0.29
MRPL55-204ENST00000348259 C9orf131Q5VYM1 1079 aa13.25□□□□□ -0.29
MRPL55-204ENST00000348259 ARHGAP27Q6ZUM4 889 aa13.25□□□□□ -0.29
MRPL55-204ENST00000348259 MIER1Q8N108 512 aa13.25□□□□□ -0.29
MRPL55-204ENST00000348259 KLRG1Q96E93 195 aa13.25□□□□□ -0.29
MRPL55-204ENST00000348259 PPM1GO15355 546 aaPredicted RBP13.24□□□□□ -0.29
MRPL55-204ENST00000348259 FCHSD2O94868 740 aa13.24□□□□□ -0.29
MRPL55-204ENST00000348259 FSTL1Q12841 308 aa13.24□□□□□ -0.29
MRPL55-204ENST00000348259 CCDC88AQ3V6T2 1871 aa13.24□□□□□ -0.29
MRPL55-204ENST00000348259 MRC1P22897 1456 aa13.23□□□□□ -0.29
MRPL55-204ENST00000348259 TIAM2Q8IVF5 1701 aa13.23□□□□□ -0.29
MRPL55-204ENST00000348259 HTRA3P83110 453 aa13.23□□□□□ -0.29
MRPL55-204ENST00000348259 FKBP8Q14318 412 aa13.23□□□□□ -0.29
MRPL55-204ENST00000348259 HSP90AB1P08238 724 aaKnown RBP13.22□□□□□ -0.29
MRPL55-204ENST00000348259 TM4SF1P30408 202 aa13.22□□□□□ -0.29
MRPL55-204ENST00000348259 RFC4P35249 363 aa13.22□□□□□ -0.29
MRPL55-204ENST00000348259 COL13A1Q5TAT6 717 aaPredicted RBP13.22□□□□□ -0.29
MRPL55-204ENST00000348259 RBM42Q9BTD8 480 aaKnown RBP13.22□□□□□ -0.29
MRPL55-204ENST00000348259 PIM2Q9P1W9 311 aa13.22□□□□□ -0.29
MRPL55-204ENST00000348259 SRP68Q9UHB9 627 aaKnown RBP13.22□□□□□ -0.29
MRPL55-204ENST00000348259 PARP3Q9Y6F1 533 aa13.22□□□□□ -0.29
MRPL55-204ENST00000348259 UBR2Q8IWV8 1755 aa13.22□□□□□ -0.29
MRPL55-204ENST00000348259 POLRMTO00411 1230 aaKnown RBP13.21□□□□□ -0.29
MRPL55-204ENST00000348259 CRKLP46109 303 aaKnown RBP13.21□□□□□ -0.29
MRPL55-204ENST00000348259 PRELPP51888 382 aa13.21□□□□□ -0.29
MRPL55-204ENST00000348259 INTS5Q6P9B9 1019 aaKnown RBP13.21□□□□□ -0.29
MRPL55-204ENST00000348259 DICER1Q9UPY3 1922 aaKnown RBP13.21□□□□□ -0.3
MRPL55-204ENST00000348259 ANKRD31Q8N7Z5 1873 aa13.21□□□□□ -0.3
MRPL55-204ENST00000348259 KIF7Q2M1P5 1343 aa13.2□□□□□ -0.3
MRPL55-204ENST00000348259 ZC3H4Q9UPT8 1303 aaKnown RBP13.2□□□□□ -0.3
MRPL55-204ENST00000348259 CHRNA5P30532 468 aa13.19□□□□□ -0.3
MRPL55-204ENST00000348259 AMOTQ4VCS5 1084 aa13.19□□□□□ -0.3
MRPL55-204ENST00000348259 PLEKHO1Q53GL0 409 aaPredicted RBP13.19□□□□□ -0.3
MRPL55-204ENST00000348259 DALRD3Q5D0E6 543 aaKnown RBP13.19□□□□□ -0.3
MRPL55-204ENST00000348259 ZNF530Q6P9A1 599 aaPredicted RBP13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 98.7 ms