RNA–Protein interactions for RNA: ENST00000346569.6

ECM1-201, Transcript of extracellular matrix protein 1, humanhuman

TSL 1 (best) BASIC

Gene ECM1, Length 1,444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-201ENST00000346569 MS4A1P11836 297 aa14.07□□□□□ -0.16
ECM1-201ENST00000346569 TRIM27P14373 513 aa14.07□□□□□ -0.16
ECM1-201ENST00000346569 ATF7IPQ6VMQ6 1270 aa14.07□□□□□ -0.16
ECM1-201ENST00000346569 SLC52A2Q9HAB3 445 aa14.07□□□□□ -0.16
ECM1-201ENST00000346569 KDM6AO15550 1401 aaPredicted RBP14.07□□□□□ -0.16
ECM1-201ENST00000346569 SLIT2O94813 1529 aa14.07□□□□□ -0.16
ECM1-201ENST00000346569 DISP2A7MBM2 1401 aa14.07□□□□□ -0.16
ECM1-201ENST00000346569 CANXP27824 592 aaKnown RBP14.07□□□□□ -0.16
ECM1-201ENST00000346569 B4GALNT3Q6L9W6 998 aa14.07□□□□□ -0.16
ECM1-201ENST00000346569 DZIP1LQ8IYY4 767 aaKnown RBP14.07□□□□□ -0.16
ECM1-201ENST00000346569 HEG1Q9ULI3 1381 aa14.06□□□□□ -0.16
ECM1-201ENST00000346569 PCDH11XQ9BZA7 1347 aa14.06□□□□□ -0.16
ECM1-201ENST00000346569 PCDH11YQ9BZA8 1340 aa14.06□□□□□ -0.16
ECM1-201ENST00000346569 TCERG1O14776 1098 aaKnown RBP14.06□□□□□ -0.16
ECM1-201ENST00000346569 NFATC2IPQ8NCF5 419 aa14.06□□□□□ -0.16
ECM1-201ENST00000346569 USP35Q9P2H5 1018 aa14.06□□□□□ -0.16
ECM1-201ENST00000346569 THRAP3Q9Y2W1 955 aaKnown RBP14.06□□□□□ -0.16
ECM1-201ENST00000346569 SPATA31A1Q5TZJ5 1347 aa14.05□□□□□ -0.16
ECM1-201ENST00000346569 HOXB7P09629 217 aa14.05□□□□□ -0.16
ECM1-201ENST00000346569 FNBP4Q8N3X1 1017 aaPredicted RBP14.05□□□□□ -0.16
ECM1-201ENST00000346569 COG6Q9Y2V7 657 aa14.05□□□□□ -0.16
ECM1-201ENST00000346569 ERVV-2B6SEH9 535 aa14.04□□□□□ -0.16
ECM1-201ENST00000346569 MEX3CQ5U5Q3 659 aaKnown RBP14.04□□□□□ -0.16
ECM1-201ENST00000346569 ZNF772Q68DY9 489 aaPredicted RBP14.04□□□□□ -0.16
ECM1-201ENST00000346569 CLUAP1Q96AJ1 413 aa14.04□□□□□ -0.16
ECM1-201ENST00000346569 SPATA31A5Q5VU36 1347 aa14.03□□□□□ -0.16
ECM1-201ENST00000346569 SPATA31A7Q8IWB4 1347 aa14.03□□□□□ -0.16
ECM1-201ENST00000346569 PARP4Q9UKK3 1724 aaKnown RBP14.03□□□□□ -0.16
ECM1-201ENST00000346569 SCN11AQ9UI33 1791 aa14.03□□□□□ -0.16
ECM1-201ENST00000346569 SLC4A2P04920 1241 aa14.03□□□□□ -0.16
ECM1-201ENST00000346569 AAMPQ13685 434 aa14.03□□□□□ -0.16
ECM1-201ENST00000346569 CCDC30Q5VVM6 783 aa14.03□□□□□ -0.16
ECM1-201ENST00000346569 ZNF790Q6PG37 636 aa14.03□□□□□ -0.16
ECM1-201ENST00000346569 UNC5CLQ8IV45 518 aa14.03□□□□□ -0.16
ECM1-201ENST00000346569 DDX54Q8TDD1 881 aaKnown RBP14.03□□□□□ -0.16
ECM1-201ENST00000346569 CCDC136Q96JN2 1154 aa14.03□□□□□ -0.16
ECM1-201ENST00000346569 CDCA7Q9BWT1 371 aaPredicted RBP14.03□□□□□ -0.16
ECM1-201ENST00000346569 SIPA1L3O60292 1781 aaPredicted RBP14.02□□□□□ -0.16
ECM1-201ENST00000346569 EXOC5O00471 708 aa14.02□□□□□ -0.16
ECM1-201ENST00000346569 GIGYF1O75420 1035 aaPredicted RBP14.02□□□□□ -0.16
ECM1-201ENST00000346569 MVPQ14764 893 aaKnown RBP14.02□□□□□ -0.16
ECM1-201ENST00000346569 NGLY1Q96IV0 654 aa14.02□□□□□ -0.16
ECM1-201ENST00000346569 KDM3BQ7LBC6 1761 aa14.02□□□□□ -0.17
ECM1-201ENST00000346569 MRC1P22897 1456 aa14.01□□□□□ -0.17
ECM1-201ENST00000346569 BCL9LQ86UU0 1499 aa14.01□□□□□ -0.17
ECM1-201ENST00000346569 NRAPQ86VF7 1730 aa14.01□□□□□ -0.17
ECM1-201ENST00000346569 CABP4P57796 275 aa14.01□□□□□ -0.17
ECM1-201ENST00000346569 BARGINQ6ZT62 677 aa14.01□□□□□ -0.17
ECM1-201ENST00000346569 CHMP4AQ9BY43 222 aa14.01□□□□□ -0.17
ECM1-201ENST00000346569 PLCH1Q4KWH8 1693 aa14.01□□□□□ -0.17
ECM1-201ENST00000346569 EP400Q96L91 3159 aa14.01□□□□□ -0.17
ECM1-201ENST00000346569 AFF2P51816 1311 aa14.01□□□□□ -0.17
ECM1-201ENST00000346569 SLC39A6Q13433 755 aa14□□□□□ -0.17
ECM1-201ENST00000346569 VPS72Q15906 364 aa14□□□□□ -0.17
ECM1-201ENST00000346569 FTSJ3Q8IY81 847 aaKnown RBP14□□□□□ -0.17
ECM1-201ENST00000346569 TMEM57Q8N5G2 664 aa14□□□□□ -0.17
ECM1-201ENST00000346569 C8orf37Q96NL8 207 aa14□□□□□ -0.17
ECM1-201ENST00000346569 API5Q9BZZ5 524 aaKnown RBP14□□□□□ -0.17
ECM1-201ENST00000346569 VIRMAQ69YN4 1812 aaKnown RBP14□□□□□ -0.17
ECM1-201ENST00000346569 NWD2Q9ULI1 1742 aa14□□□□□ -0.17
ECM1-201ENST00000346569 G2E3Q7L622 706 aa13.99□□□□□ -0.17
ECM1-201ENST00000346569 ABCC4O15439 1325 aa13.99□□□□□ -0.17
ECM1-201ENST00000346569 PTPRCP08575 1304 aa13.99□□□□□ -0.17
ECM1-201ENST00000346569 SHANK3Q9BYB0 1731 aa13.99□□□□□ -0.17
ECM1-201ENST00000346569 HDGFL1Q5TGJ6 251 aa13.98□□□□□ -0.17
ECM1-201ENST00000346569 STK31Q9BXU1 1019 aa13.98□□□□□ -0.17
ECM1-201ENST00000346569 ZNF496Q96IT1 587 aaPredicted RBP13.98□□□□□ -0.17
ECM1-201ENST00000346569 DDX19BQ9UMR2 479 aa13.98□□□□□ -0.17
ECM1-201ENST00000346569 PRAMEF22A3QJZ6 481 aa13.97□□□□□ -0.17
ECM1-201ENST00000346569 ZBTB7BO15156 539 aaPredicted RBP13.97□□□□□ -0.17
ECM1-201ENST00000346569 EIF2S2P20042 333 aaKnown RBP13.97□□□□□ -0.17
ECM1-201ENST00000346569 INTS3Q68E01 1043 aaKnown RBP13.97□□□□□ -0.17
ECM1-201ENST00000346569 NECTIN2Q92692 538 aa13.97□□□□□ -0.17
ECM1-201ENST00000346569 ZBTB40Q9NUA8 1239 aa13.97□□□□□ -0.17
ECM1-201ENST00000346569 RGS12O14924 1447 aa13.96□□□□□ -0.17
ECM1-201ENST00000346569 PCDHB15Q9Y5E8 787 aa13.96□□□□□ -0.18
ECM1-201ENST00000346569 RXRBP28702 533 aa13.95□□□□□ -0.18
ECM1-201ENST00000346569 FLIIQ13045 1269 aa13.95□□□□□ -0.18
ECM1-201ENST00000346569 DDB1Q16531 1140 aa13.95□□□□□ -0.18
ECM1-201ENST00000346569 ITPRIPQ8IWB1 547 aa13.95□□□□□ -0.18
ECM1-201ENST00000346569 FMNL2Q96PY5 1086 aa13.95□□□□□ -0.18
ECM1-201ENST00000346569 USP21Q9UK80 565 aa13.95□□□□□ -0.18
ECM1-201ENST00000346569 KDM2BQ8NHM5 1336 aa13.95□□□□□ -0.18
ECM1-201ENST00000346569 SNRPA1P09661 255 aaKnown RBP13.94□□□□□ -0.18
ECM1-201ENST00000346569 PDIA6Q15084 440 aa13.94□□□□□ -0.18
ECM1-201ENST00000346569 TTC5Q8N0Z6 440 aa13.94□□□□□ -0.18
ECM1-201ENST00000346569 MARCH10Q8NA82 808 aaPredicted RBP13.94□□□□□ -0.18
ECM1-201ENST00000346569 PIGBQ92521 554 aa13.94□□□□□ -0.18
ECM1-201ENST00000346569 PHAXQ9H814 394 aaKnown RBP13.94□□□□□ -0.18
ECM1-201ENST00000346569 CHPF2Q9P2E5 772 aa13.94□□□□□ -0.18
ECM1-201ENST00000346569 DBF4Q9UBU7 674 aaPredicted RBP13.94□□□□□ -0.18
ECM1-201ENST00000346569 CCDC9Q9Y3X0 531 aaKnown RBP13.94□□□□□ -0.18
ECM1-201ENST00000346569 USP16Q9Y5T5 823 aa13.94□□□□□ -0.18
ECM1-201ENST00000346569 TNS2Q63HR2 1409 aa13.94□□□□□ -0.18
ECM1-201ENST00000346569 CACNA1FO60840 1977 aa13.93□□□□□ -0.18
ECM1-201ENST00000346569 IGHDP01880 384 aa13.93□□□□□ -0.18
ECM1-201ENST00000346569 CHMP4BQ9H444 224 aaKnown RBP13.92□□□□□ -0.18
ECM1-201ENST00000346569 DDX21Q9NR30 783 aaKnown RBP eCLIP13.92□□□□□ -0.18
ECM1-201ENST00000346569 TMOD3Q9NYL9 352 aa13.92□□□□□ -0.18
ECM1-201ENST00000346569 ATRNO75882 1429 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms