RNA–Protein interactions for RNA: ENST00000346495.6

TSPAN3-202, Transcript of tetraspanin 3, humanhuman

TSL 2 BASIC

Gene TSPAN3, Length 1,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-202ENST00000346495 DDX19BQ9UMR2 479 aa27.35■■□□□ 1.97
TSPAN3-202ENST00000346495 CYP27B1O15528 508 aa27.34■■□□□ 1.97
TSPAN3-202ENST00000346495 ZCRB1Q8TBF4 217 aaKnown RBP27.34■■□□□ 1.97
TSPAN3-202ENST00000346495 DCAF5Q96JK2 942 aa27.34■■□□□ 1.97
TSPAN3-202ENST00000346495 PLCH1Q4KWH8 1693 aa27.34■■□□□ 1.97
TSPAN3-202ENST00000346495 EIF4A1P60842 406 aaKnown RBP27.34■■□□□ 1.97
TSPAN3-202ENST00000346495 TMEM57Q8N5G2 664 aa27.34■■□□□ 1.97
TSPAN3-202ENST00000346495 CACNA1FO60840 1977 aa27.33■■□□□ 1.97
TSPAN3-202ENST00000346495 PCDH11XQ9BZA7 1347 aa27.33■■□□□ 1.97
TSPAN3-202ENST00000346495 PCDH11YQ9BZA8 1340 aa27.33■■□□□ 1.97
TSPAN3-202ENST00000346495 CCDC30Q5VVM6 783 aa27.33■■□□□ 1.97
TSPAN3-202ENST00000346495 ITPRIPQ8IWB1 547 aa27.33■■□□□ 1.97
TSPAN3-202ENST00000346495 CHMP4AQ9BY43 222 aa27.32■■□□□ 1.96
TSPAN3-202ENST00000346495 MRC1P22897 1456 aa27.32■■□□□ 1.96
TSPAN3-202ENST00000346495 PTPRCP08575 1304 aa27.32■■□□□ 1.96
TSPAN3-202ENST00000346495 HOXB7P09629 217 aa27.31■■□□□ 1.96
TSPAN3-202ENST00000346495 CENPQQ7L2Z9 268 aaPredicted RBP27.31■■□□□ 1.96
TSPAN3-202ENST00000346495 CERKQ8TCT0 537 aa27.31■■□□□ 1.96
TSPAN3-202ENST00000346495 STK31Q9BXU1 1019 aa27.31■■□□□ 1.96
TSPAN3-202ENST00000346495 SLC52A2Q9HAB3 445 aa27.31■■□□□ 1.96
TSPAN3-202ENST00000346495 ABCC4O15439 1325 aa27.31■■□□□ 1.96
TSPAN3-202ENST00000346495 KDM2BQ8NHM5 1336 aa27.3■■□□□ 1.96
TSPAN3-202ENST00000346495 SHANK3Q9BYB0 1731 aa27.3■■□□□ 1.96
TSPAN3-202ENST00000346495 SLC4A2P04920 1241 aa27.3■■□□□ 1.96
TSPAN3-202ENST00000346495 ADAMTS2O95450 1211 aa27.28■■□□□ 1.96
TSPAN3-202ENST00000346495 CHMP4BQ9H444 224 aaKnown RBP27.28■■□□□ 1.96
TSPAN3-202ENST00000346495 NRAPQ86VF7 1730 aa27.27■■□□□ 1.96
TSPAN3-202ENST00000346495 KCNQ3O43525 872 aa27.27■■□□□ 1.96
TSPAN3-202ENST00000346495 NWD2Q9ULI1 1742 aa27.25■■□□□ 1.95
TSPAN3-202ENST00000346495 NUTM2BA6NNL0 878 aaPredicted RBP27.25■■□□□ 1.95
TSPAN3-202ENST00000346495 NUTM2EB1AL46 878 aaPredicted RBP27.25■■□□□ 1.95
TSPAN3-202ENST00000346495 HDGFL1Q5TGJ6 251 aa27.25■■□□□ 1.95
TSPAN3-202ENST00000346495 NUTM2AQ8IVF1 878 aaPredicted RBP27.25■■□□□ 1.95
TSPAN3-202ENST00000346495 USP35Q9P2H5 1018 aa27.25■■□□□ 1.95
TSPAN3-202ENST00000346495 JCADQ9P266 1359 aa27.25■■□□□ 1.95
TSPAN3-202ENST00000346495 NKX1-1Q15270 411 aaPredicted RBP27.24■■□□□ 1.95
TSPAN3-202ENST00000346495 HEG1Q9ULI3 1381 aa27.24■■□□□ 1.95
TSPAN3-202ENST00000346495 RGS12O14924 1447 aa27.24■■□□□ 1.95
TSPAN3-202ENST00000346495 WNK3Q9BYP7 1800 aa27.24■■□□□ 1.95
TSPAN3-202ENST00000346495 NFATC2IPQ8NCF5 419 aa27.23■■□□□ 1.95
TSPAN3-202ENST00000346495 DISP2A7MBM2 1401 aa27.23■■□□□ 1.95
TSPAN3-202ENST00000346495 CABP4P57796 275 aa27.22■■□□□ 1.95
TSPAN3-202ENST00000346495 ZNF790Q6PG37 636 aa27.21■■□□□ 1.95
TSPAN3-202ENST00000346495 ZBTB40Q9NUA8 1239 aa27.21■■□□□ 1.95
TSPAN3-202ENST00000346495 PCDHB15Q9Y5E8 787 aa27.21■■□□□ 1.95
TSPAN3-202ENST00000346495 INTS3Q68E01 1043 aaKnown RBP27.2■■□□□ 1.95
TSPAN3-202ENST00000346495 G2E3Q7L622 706 aa27.2■■□□□ 1.95
TSPAN3-202ENST00000346495 NECTIN2Q92692 538 aa27.2■■□□□ 1.95
TSPAN3-202ENST00000346495 ERVV-2B6SEH9 535 aa27.19■■□□□ 1.94
TSPAN3-202ENST00000346495 GIGYF1O75420 1035 aaPredicted RBP27.19■■□□□ 1.94
TSPAN3-202ENST00000346495 DDX54Q8TDD1 881 aaKnown RBP27.19■■□□□ 1.94
TSPAN3-202ENST00000346495 ZBTB7BO15156 539 aaPredicted RBP27.18■■□□□ 1.94
TSPAN3-202ENST00000346495 IGHDP01880 384 aa27.18■■□□□ 1.94
TSPAN3-202ENST00000346495 EIF2S2P20042 333 aaKnown RBP27.18■■□□□ 1.94
TSPAN3-202ENST00000346495 FLIIQ13045 1269 aa27.18■■□□□ 1.94
TSPAN3-202ENST00000346495 SLIT2O94813 1529 aa27.18■■□□□ 1.94
TSPAN3-202ENST00000346495 RWDD1Q9H446 243 aaPredicted RBP27.17■■□□□ 1.94
TSPAN3-202ENST00000346495 SLC39A6Q13433 755 aa27.16■■□□□ 1.94
TSPAN3-202ENST00000346495 THRAP3Q9Y2W1 955 aaKnown RBP27.16■■□□□ 1.94
TSPAN3-202ENST00000346495 TTC5Q8N0Z6 440 aa27.16■■□□□ 1.94
TSPAN3-202ENST00000346495 CDCA7Q9BWT1 371 aaPredicted RBP27.16■■□□□ 1.94
TSPAN3-202ENST00000346495 SPATA31A1Q5TZJ5 1347 aa27.15■■□□□ 1.94
TSPAN3-202ENST00000346495 FKBP5Q13451 457 aaPredicted RBP27.13■■□□□ 1.93
TSPAN3-202ENST00000346495 SPATA31A6Q5VVP1 1343 aa27.13■■□□□ 1.93
TSPAN3-202ENST00000346495 C5P01031 1676 aa27.13■■□□□ 1.93
TSPAN3-202ENST00000346495 CHPF2Q9P2E5 772 aa27.12■■□□□ 1.93
TSPAN3-202ENST00000346495 DBF4Q9UBU7 674 aaPredicted RBP27.12■■□□□ 1.93
TSPAN3-202ENST00000346495 TOGARAM1Q9Y4F4 1720 aa27.12■■□□□ 1.93
TSPAN3-202ENST00000346495 CCT4P50991 539 aaKnown RBP27.12■■□□□ 1.93
TSPAN3-202ENST00000346495 N4BP2Q86UW6 1770 aaPredicted RBP27.11■■□□□ 1.93
TSPAN3-202ENST00000346495 PAPPAQ13219 1627 aa27.11■■□□□ 1.93
TSPAN3-202ENST00000346495 EXOC5O00471 708 aa27.11■■□□□ 1.93
TSPAN3-202ENST00000346495 HDAC1Q13547 482 aaPredicted RBP27.11■■□□□ 1.93
TSPAN3-202ENST00000346495 FMNL2Q96PY5 1086 aa27.11■■□□□ 1.93
TSPAN3-202ENST00000346495 SPATA31A5Q5VU36 1347 aa27.1■■□□□ 1.93
TSPAN3-202ENST00000346495 SPATA31A7Q8IWB4 1347 aa27.1■■□□□ 1.93
TSPAN3-202ENST00000346495 PXDNLA1KZ92 1463 aa27.1■■□□□ 1.93
TSPAN3-202ENST00000346495 ZNF496Q96IT1 587 aaPredicted RBP27.1■■□□□ 1.93
TSPAN3-202ENST00000346495 TSHZ2Q9NRE2 1034 aa27.1■■□□□ 1.93
TSPAN3-202ENST00000346495 TNS2Q63HR2 1409 aa27.1■■□□□ 1.93
TSPAN3-202ENST00000346495 UBR2Q8IWV8 1755 aa27.09■■□□□ 1.93
TSPAN3-202ENST00000346495 F6X3S4 739 aa27.08■■□□□ 1.93
TSPAN3-202ENST00000346495 LRP6O75581 1613 aa27.08■■□□□ 1.93
TSPAN3-202ENST00000346495 SNRPA1P09661 255 aaKnown RBP27.08■■□□□ 1.93
TSPAN3-202ENST00000346495 SLC4A10Q6U841 1118 aa27.08■■□□□ 1.93
TSPAN3-202ENST00000346495 PHAXQ9H814 394 aaKnown RBP27.08■■□□□ 1.93
TSPAN3-202ENST00000346495 LAMB4A4D0S4 1761 aa27.07■■□□□ 1.92
TSPAN3-202ENST00000346495 PRAMEF22A3QJZ6 481 aa27.07■■□□□ 1.92
TSPAN3-202ENST00000346495 UNC5CLQ8IV45 518 aa27.07■■□□□ 1.92
TSPAN3-202ENST00000346495 BARGINQ6ZT62 677 aa27.05■■□□□ 1.92
TSPAN3-202ENST00000346495 NGLY1Q96IV0 654 aa27.05■■□□□ 1.92
TSPAN3-202ENST00000346495 HYPKQ9NX55 129 aa27.05■■□□□ 1.92
TSPAN3-202ENST00000346495 C8orf37Q96NL8 207 aa27.05■■□□□ 1.92
TSPAN3-202ENST00000346495 DDX21Q9NR30 783 aaKnown RBP eCLIP27.05■■□□□ 1.92
TSPAN3-202ENST00000346495 TMOD3Q9NYL9 352 aa27.05■■□□□ 1.92
TSPAN3-202ENST00000346495 CCDC9Q9Y3X0 531 aaKnown RBP27.05■■□□□ 1.92
TSPAN3-202ENST00000346495 GLI3P10071 1580 aa27.05■■□□□ 1.92
TSPAN3-202ENST00000346495 ITGB4P16144 1822 aa27.04■■□□□ 1.92
TSPAN3-202ENST00000346495 KCPQ6ZWJ8 1503 aa27.02■■□□□ 1.92
TSPAN3-202ENST00000346495 FNBP4Q8N3X1 1017 aaPredicted RBP27.01■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms