RNA–Protein interactions for RNA: ENST00000345662.5

SPAST-202, Transcript of spastin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SPAST, Length 5,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-202ENST00000345662 POTEB2H3BUK9 544 aa20.41■□□□□ 0.86
SPAST-202ENST00000345662 CTNNA3Q9UI47 895 aa20.41■□□□□ 0.86
SPAST-202ENST00000345662 ZRSR2Q15696 482 aaKnown RBP20.41■□□□□ 0.86
SPAST-202ENST00000345662 TTC39AQ5SRH9 613 aa20.41■□□□□ 0.86
SPAST-202ENST00000345662 BBXQ8WY36 941 aaPredicted RBP20.41■□□□□ 0.86
SPAST-202ENST00000345662 CCDC43Q96MW1 224 aaKnown RBP20.41■□□□□ 0.86
SPAST-202ENST00000345662 ZFYVE27Q5T4F4 411 aa20.41■□□□□ 0.86
SPAST-202ENST00000345662 NOL7Q9UMY1 257 aaKnown RBP20.4■□□□□ 0.86
SPAST-202ENST00000345662 STX1AQ16623 288 aa20.4■□□□□ 0.86
SPAST-202ENST00000345662 STK11IPQ8N1F8 1099 aa20.4■□□□□ 0.86
SPAST-202ENST00000345662 CCDC69A6NI79 296 aa20.4■□□□□ 0.86
SPAST-202ENST00000345662 LMAN1P49257 510 aa20.4■□□□□ 0.86
SPAST-202ENST00000345662 TROQ12816 1431 aaPredicted RBP20.39■□□□□ 0.86
SPAST-202ENST00000345662 CDK19Q9BWU1 502 aa20.39■□□□□ 0.86
SPAST-202ENST00000345662 PLEKHO1Q53GL0 409 aaPredicted RBP20.39■□□□□ 0.85
SPAST-202ENST00000345662 SMAP1Q8IYB5 467 aaPredicted RBP20.39■□□□□ 0.85
SPAST-202ENST00000345662 RPRD2Q5VT52 1461 aaKnown RBP20.39■□□□□ 0.85
SPAST-202ENST00000345662 RAB3GAP1Q15042 981 aa20.39■□□□□ 0.85
SPAST-202ENST00000345662 HECW1Q76N89 1606 aa20.39■□□□□ 0.85
SPAST-202ENST00000345662 PRIM1P49642 420 aaKnown RBP20.38■□□□□ 0.85
SPAST-202ENST00000345662 AFAP1Q8N556 730 aa20.38■□□□□ 0.85
SPAST-202ENST00000345662 NUCB1Q02818 461 aa20.38■□□□□ 0.85
SPAST-202ENST00000345662 GOLGA6L9A6NEM1 432 aa20.38■□□□□ 0.85
SPAST-202ENST00000345662 THUMPD2Q9BTF0 503 aaKnown RBP20.38■□□□□ 0.85
SPAST-202ENST00000345662 PCDHB15Q9Y5E8 787 aa20.38■□□□□ 0.85
SPAST-202ENST00000345662 EIF5P55010 431 aaKnown RBP20.38■□□□□ 0.85
SPAST-202ENST00000345662 TTC22Q5TAA0 569 aa20.38■□□□□ 0.85
SPAST-202ENST00000345662 TMC6Q7Z403 805 aa20.38■□□□□ 0.85
SPAST-202ENST00000345662 TAX1BP1Q86VP1 789 aa20.38■□□□□ 0.85
SPAST-202ENST00000345662 GJB2P29033 226 aa20.37■□□□□ 0.85
SPAST-202ENST00000345662 SMC5Q8IY18 1101 aa20.37■□□□□ 0.85
SPAST-202ENST00000345662 SMARCC1Q92922 1105 aaPredicted RBP20.37■□□□□ 0.85
SPAST-202ENST00000345662 ATAD2Q6PL18 1390 aa20.37■□□□□ 0.85
SPAST-202ENST00000345662 NUTM2GQ5VZR2 741 aa20.37■□□□□ 0.85
SPAST-202ENST00000345662 INCENPQ9NQS7 918 aa20.37■□□□□ 0.85
SPAST-202ENST00000345662 GIMAP6Q6P9H5 292 aa20.37■□□□□ 0.85
SPAST-202ENST00000345662 TMX3Q96JJ7 454 aa20.37■□□□□ 0.85
SPAST-202ENST00000345662 TANGO6Q9C0B7 1094 aa20.37■□□□□ 0.85
SPAST-202ENST00000345662 AQRO60306 1485 aaKnown RBP eCLIP20.36■□□□□ 0.85
SPAST-202ENST00000345662 IMMTQ16891 758 aaKnown RBP20.36■□□□□ 0.85
SPAST-202ENST00000345662 CCDC150Q8NCX0 1101 aa20.36■□□□□ 0.85
SPAST-202ENST00000345662 ZNF692Q9BU19 519 aaPredicted RBP20.36■□□□□ 0.85
SPAST-202ENST00000345662 MTMR7Q9Y216 660 aa20.36■□□□□ 0.85
SPAST-202ENST00000345662 MICALCLQ6ZW33 695 aa20.36■□□□□ 0.85
SPAST-202ENST00000345662 WASF1Q92558 559 aa20.36■□□□□ 0.85
SPAST-202ENST00000345662 PRG4Q92954 1404 aaPredicted RBP20.35■□□□□ 0.85
SPAST-202ENST00000345662 TTC12Q9H892 705 aaPredicted RBP20.35■□□□□ 0.85
SPAST-202ENST00000345662 TRHP20396 242 aaPredicted RBP20.35■□□□□ 0.85
SPAST-202ENST00000345662 EVA1CP58658 441 aa20.35■□□□□ 0.85
SPAST-202ENST00000345662 GPATCH11Q8N954 259 aa20.35■□□□□ 0.85
SPAST-202ENST00000345662 ENOX2Q16206 610 aaKnown RBP20.35■□□□□ 0.85
SPAST-202ENST00000345662 NACAP1Q9BZK3 213 aa20.35■□□□□ 0.85
SPAST-202ENST00000345662 TFIP11Q9UBB9 837 aaKnown RBP20.35■□□□□ 0.85
SPAST-202ENST00000345662 NEFHP12036 1026 aa20.35■□□□□ 0.85
SPAST-202ENST00000345662 DHX37Q8IY37 1157 aaKnown RBP20.35■□□□□ 0.85
SPAST-202ENST00000345662 FSIP1Q8NA03 581 aa20.34■□□□□ 0.85
SPAST-202ENST00000345662 RBM25P49756 843 aaKnown RBP20.34■□□□□ 0.85
SPAST-202ENST00000345662 SYCP1Q15431 976 aa20.34■□□□□ 0.85
SPAST-202ENST00000345662 CCDC186Q7Z3E2 898 aa20.34■□□□□ 0.85
SPAST-202ENST00000345662 TAF4BQ92750 862 aa20.34■□□□□ 0.85
SPAST-202ENST00000345662 FAM200AQ8TCP9 573 aa20.34■□□□□ 0.85
SPAST-202ENST00000345662 SLC3A2P08195 630 aaKnown RBP20.34■□□□□ 0.85
SPAST-202ENST00000345662 ZSCAN25Q6NSZ9 544 aa20.34■□□□□ 0.85
SPAST-202ENST00000345662 CEP131Q9UPN4 1083 aa20.34■□□□□ 0.85
SPAST-202ENST00000345662 MAPKBP1O60336 1514 aa20.33■□□□□ 0.85
SPAST-202ENST00000345662 ZSCAN22P10073 491 aaPredicted RBP20.33■□□□□ 0.85
SPAST-202ENST00000345662 DDX54Q8TDD1 881 aaKnown RBP20.33■□□□□ 0.85
SPAST-202ENST00000345662 RBM33Q96EV2 1170 aaKnown RBP20.33■□□□□ 0.85
SPAST-202ENST00000345662 NLRP2Q9NX02 1062 aa20.33■□□□□ 0.85
SPAST-202ENST00000345662 KRT18P05783 430 aaKnown RBP20.33■□□□□ 0.84
SPAST-202ENST00000345662 NUP133Q8WUM0 1156 aa20.33■□□□□ 0.84
SPAST-202ENST00000345662 ZNF397Q8NF99 534 aaPredicted RBP20.32■□□□□ 0.84
SPAST-202ENST00000345662 U3KPZ7 1027 aaPredicted RBP20.32■□□□□ 0.84
SPAST-202ENST00000345662 SYNJ2O15056 1496 aa20.32■□□□□ 0.84
SPAST-202ENST00000345662 SPA17Q15506 151 aa20.32■□□□□ 0.84
SPAST-202ENST00000345662 USP48Q86UV5 1035 aa20.31■□□□□ 0.84
SPAST-202ENST00000345662 FEZ1Q99689 392 aa20.31■□□□□ 0.84
SPAST-202ENST00000345662 PCF11O94913 1555 aaKnown RBP20.31■□□□□ 0.84
SPAST-202ENST00000345662 SKILP12757 684 aa20.31■□□□□ 0.84
SPAST-202ENST00000345662 C8orf76Q96K31 380 aa20.31■□□□□ 0.84
SPAST-202ENST00000345662 LARP6Q9BRS8 491 aaKnown RBP20.31■□□□□ 0.84
SPAST-202ENST00000345662 PTPN23Q9H3S7 1636 aa20.31■□□□□ 0.84
SPAST-202ENST00000345662 SEPT7Q16181 437 aaKnown RBP20.31■□□□□ 0.84
SPAST-202ENST00000345662 GRIN2BQ13224 1484 aa20.31■□□□□ 0.84
SPAST-202ENST00000345662 HMGB1P09429 215 aaKnown RBP20.31■□□□□ 0.84
SPAST-202ENST00000345662 FKBP4Q02790 459 aaKnown RBP eCLIP20.31■□□□□ 0.84
SPAST-202ENST00000345662 RAI14Q9P0K7 980 aa20.31■□□□□ 0.84
SPAST-202ENST00000345662 IPO4Q8TEX9 1081 aaKnown RBP20.3■□□□□ 0.84
SPAST-202ENST00000345662 IVLP07476 585 aa20.3■□□□□ 0.84
SPAST-202ENST00000345662 RNF187Q5TA31 235 aaPredicted RBP20.3■□□□□ 0.84
SPAST-202ENST00000345662 ARFGAP3Q9NP61 516 aa20.3■□□□□ 0.84
SPAST-202ENST00000345662 GTF2A1P52655 376 aaPredicted RBP20.29■□□□□ 0.84
SPAST-202ENST00000345662 GNG11P61952 73 aa20.29■□□□□ 0.84
SPAST-202ENST00000345662 RRS1Q15050 365 aaKnown RBP20.29■□□□□ 0.84
SPAST-202ENST00000345662 TMX1Q9H3N1 280 aa20.29■□□□□ 0.84
SPAST-202ENST00000345662 SLU7O95391 586 aaKnown RBP20.29■□□□□ 0.84
SPAST-202ENST00000345662 ABTB2Q8N961 1025 aa20.29■□□□□ 0.84
SPAST-202ENST00000345662 CCDC57Q2TAC2 916 aa20.29■□□□□ 0.84
SPAST-202ENST00000345662 CTR9Q6PD62 1173 aa20.29■□□□□ 0.84
SPAST-202ENST00000345662 OGFRQ9NZT2 677 aa20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms