RNA–Protein interactions for RNA: ENST00000345617.7

HDAC4-201, Transcript of histone deacetylase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC4, Length 8,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-201ENST00000345617 CCDC113Q9H0I3 377 aa22.45■■□□□ 1.18
HDAC4-201ENST00000345617 TCP11L2Q8N4U5 519 aa22.45■■□□□ 1.18
HDAC4-201ENST00000345617 ADAMTS8Q9UP79 889 aa22.45■■□□□ 1.18
HDAC4-201ENST00000345617 GOLIM4O00461 696 aa22.45■■□□□ 1.18
HDAC4-201ENST00000345617 NEBLO76041 1014 aa22.45■■□□□ 1.18
HDAC4-201ENST00000345617 ARFGAP3Q9NP61 516 aa22.45■■□□□ 1.18
HDAC4-201ENST00000345617 NUP88Q99567 741 aaPredicted RBP22.45■■□□□ 1.18
HDAC4-201ENST00000345617 FSD2A1L4K1 749 aa22.44■■□□□ 1.18
HDAC4-201ENST00000345617 C16orf45Q96MC5 204 aaPredicted RBP22.44■■□□□ 1.18
HDAC4-201ENST00000345617 TTC14Q96N46 770 aa22.44■■□□□ 1.18
HDAC4-201ENST00000345617 FERMT1Q9BQL6 677 aa22.43■■□□□ 1.18
HDAC4-201ENST00000345617 A6NNZ2 444 aa22.43■■□□□ 1.18
HDAC4-201ENST00000345617 TUBB8Q3ZCM7 444 aa22.43■■□□□ 1.18
HDAC4-201ENST00000345617 WDR66Q8TBY9 1149 aa22.43■■□□□ 1.18
HDAC4-201ENST00000345617 HS1BP3Q53T59 392 aa22.43■■□□□ 1.18
HDAC4-201ENST00000345617 IRX3P78415 501 aaPredicted RBP22.43■■□□□ 1.18
HDAC4-201ENST00000345617 WDR97A6NE52 1622 aa22.43■■□□□ 1.18
HDAC4-201ENST00000345617 SNW1Q13573 536 aaKnown RBP22.43■■□□□ 1.18
HDAC4-201ENST00000345617 SSR1P43307 286 aaKnown RBP22.42■■□□□ 1.18
HDAC4-201ENST00000345617 CACNA2D4Q7Z3S7 1137 aa22.42■■□□□ 1.18
HDAC4-201ENST00000345617 RAB11FIP3O75154 756 aa22.42■■□□□ 1.18
HDAC4-201ENST00000345617 MSL1Q68DK7 614 aa22.42■■□□□ 1.18
HDAC4-201ENST00000345617 CETN1Q12798 172 aa22.42■■□□□ 1.18
HDAC4-201ENST00000345617 TIAM1Q13009 1591 aa22.42■■□□□ 1.18
HDAC4-201ENST00000345617 CCDC178Q5BJE1 867 aa22.42■■□□□ 1.18
HDAC4-201ENST00000345617 NCOA2Q15596 1464 aa22.42■■□□□ 1.18
HDAC4-201ENST00000345617 SPECC1Q5M775 1068 aa22.41■■□□□ 1.18
HDAC4-201ENST00000345617 KANK3Q6NY19 840 aa22.41■■□□□ 1.18
HDAC4-201ENST00000345617 GOPCQ9HD26 462 aa22.41■■□□□ 1.18
HDAC4-201ENST00000345617 GRIPAP1Q4V328 841 aa22.41■■□□□ 1.18
HDAC4-201ENST00000345617 HSF2BPO75031 334 aa22.41■■□□□ 1.18
HDAC4-201ENST00000345617 LMAN1P49257 510 aa22.41■■□□□ 1.18
HDAC4-201ENST00000345617 FERP16591 822 aa22.41■■□□□ 1.18
HDAC4-201ENST00000345617 CCDC141Q6ZP82 1450 aa22.41■■□□□ 1.18
HDAC4-201ENST00000345617 HMOX1P09601 288 aa22.4■■□□□ 1.18
HDAC4-201ENST00000345617 GTF2F1P35269 517 aaKnown RBP eCLIP22.4■■□□□ 1.183e-6■■■■□ 21.4
HDAC4-201ENST00000345617 SEC63Q9UGP8 760 aaKnown RBP22.4■■□□□ 1.18
HDAC4-201ENST00000345617 SWAP70Q9UH65 585 aa22.4■■□□□ 1.18
HDAC4-201ENST00000345617 NUTM2DQ5VT03 806 aaPredicted RBP22.4■■□□□ 1.18
HDAC4-201ENST00000345617 RAI14Q9P0K7 980 aa22.4■■□□□ 1.18
HDAC4-201ENST00000345617 URI1O94763 535 aaPredicted RBP22.4■■□□□ 1.18
HDAC4-201ENST00000345617 TNIP1Q15025 636 aa22.39■■□□□ 1.18
HDAC4-201ENST00000345617 JAKMIP1Q96N16 626 aaKnown RBP22.39■■□□□ 1.18
HDAC4-201ENST00000345617 IPO4Q8TEX9 1081 aaKnown RBP22.39■■□□□ 1.17
HDAC4-201ENST00000345617 IKBKGQ9Y6K9 419 aa22.39■■□□□ 1.17
HDAC4-201ENST00000345617 GPRASP1Q5JY77 1395 aa22.39■■□□□ 1.17
HDAC4-201ENST00000345617 CEP135Q66GS9 1140 aa22.39■■□□□ 1.17
HDAC4-201ENST00000345617 ZHX3Q9H4I2 956 aa22.39■■□□□ 1.17
HDAC4-201ENST00000345617 CCDC172P0C7W6 258 aa22.38■■□□□ 1.17
HDAC4-201ENST00000345617 SH3BGRP55822 239 aaPredicted RBP22.38■■□□□ 1.17
HDAC4-201ENST00000345617 PPP2R1AP30153 589 aa22.38■■□□□ 1.17
HDAC4-201ENST00000345617 STK3Q13188 491 aa22.38■■□□□ 1.17
HDAC4-201ENST00000345617 CPSF2Q9P2I0 782 aaKnown RBP22.38■■□□□ 1.17
HDAC4-201ENST00000345617 SYTL4Q96C24 671 aaPredicted RBP22.37■■□□□ 1.17
HDAC4-201ENST00000345617 AIMP1Q12904 312 aaKnown RBP22.37■■□□□ 1.17
HDAC4-201ENST00000345617 DDX23Q9BUQ8 820 aaKnown RBP22.37■■□□□ 1.17
HDAC4-201ENST00000345617 MTHFSP49914 203 aa22.37■■□□□ 1.17
HDAC4-201ENST00000345617 PLEKHO1Q53GL0 409 aaPredicted RBP22.37■■□□□ 1.17
HDAC4-201ENST00000345617 CTAGE1Q96RT6 745 aa22.37■■□□□ 1.17
HDAC4-201ENST00000345617 CNNM1Q9NRU3 951 aa22.37■■□□□ 1.17
HDAC4-201ENST00000345617 UBE2HP62256 183 aa22.36■■□□□ 1.17
HDAC4-201ENST00000345617 ERBINQ96RT1 1412 aa22.36■■□□□ 1.17
HDAC4-201ENST00000345617 MAPK8IP2Q13387 824 aaPredicted RBP22.36■■□□□ 1.17
HDAC4-201ENST00000345617 CCDC155Q8N6L0 562 aa22.36■■□□□ 1.17
HDAC4-201ENST00000345617 PRDM10Q9NQV6 1147 aa22.36■■□□□ 1.17
HDAC4-201ENST00000345617 RASAL2Q9UJF2 1139 aa22.36■■□□□ 1.17
HDAC4-201ENST00000345617 OPA1O60313 960 aa22.36■■□□□ 1.17
HDAC4-201ENST00000345617 PIP4K2BP78356 416 aa22.35■■□□□ 1.17
HDAC4-201ENST00000345617 HLTFQ14527 1009 aaKnown RBP eCLIP22.35■■□□□ 1.17
HDAC4-201ENST00000345617 UBE4AQ14139 1066 aa22.35■■□□□ 1.17
HDAC4-201ENST00000345617 TRHP20396 242 aaPredicted RBP22.35■■□□□ 1.17
HDAC4-201ENST00000345617 LARP1Q6PKG0 1096 aaKnown RBP22.35■■□□□ 1.17
HDAC4-201ENST00000345617 RPAP2Q8IXW5 612 aaPredicted RBP22.35■■□□□ 1.17
HDAC4-201ENST00000345617 FAM135AQ9P2D6 1515 aa22.35■■□□□ 1.17
HDAC4-201ENST00000345617 PRPHP41219 470 aa22.34■■□□□ 1.17
HDAC4-201ENST00000345617 NUTM2FA1L443 756 aa22.34■■□□□ 1.17
HDAC4-201ENST00000345617 AACSQ86V21 672 aa22.34■■□□□ 1.17
HDAC4-201ENST00000345617 TDRD9Q8NDG6 1382 aaKnown RBP22.34■■□□□ 1.17
HDAC4-201ENST00000345617 CLCN1P35523 988 aa22.34■■□□□ 1.17
HDAC4-201ENST00000345617 DNAJC21Q5F1R6 531 aaKnown RBP22.34■■□□□ 1.17
HDAC4-201ENST00000345617 RSRC1Q96IZ7 334 aaKnown RBP22.34■■□□□ 1.17
HDAC4-201ENST00000345617 USH1CQ9Y6N9 552 aa22.34■■□□□ 1.17
HDAC4-201ENST00000345617 TMEM266Q2M3C6 531 aa22.33■■□□□ 1.17
HDAC4-201ENST00000345617 CAMK4Q16566 473 aa22.33■■□□□ 1.17
HDAC4-201ENST00000345617 ABCC11Q96J66 1382 aa22.33■■□□□ 1.17
HDAC4-201ENST00000345617 ADCY5O95622 1261 aa22.33■■□□□ 1.16
HDAC4-201ENST00000345617 TDO2P48775 406 aa22.33■■□□□ 1.16
HDAC4-201ENST00000345617 TTC12Q9H892 705 aaPredicted RBP22.33■■□□□ 1.16
HDAC4-201ENST00000345617 ITSN2Q9NZM3 1697 aa22.33■■□□□ 1.16
HDAC4-201ENST00000345617 KLHL40Q2TBA0 621 aa22.32■■□□□ 1.16
HDAC4-201ENST00000345617 TSNARE1Q96NA8 513 aa22.32■■□□□ 1.16
HDAC4-201ENST00000345617 HDGFL1Q5TGJ6 251 aa22.32■■□□□ 1.16
HDAC4-201ENST00000345617 PPP4R3AQ6IN85 833 aa22.32■■□□□ 1.16
HDAC4-201ENST00000345617 AMPD3Q01432 767 aa22.32■■□□□ 1.16
HDAC4-201ENST00000345617 GLRX3O76003 335 aaKnown RBP22.32■■□□□ 1.16
HDAC4-201ENST00000345617 KIF3CO14782 793 aa22.32■■□□□ 1.16
HDAC4-201ENST00000345617 XPCQ01831 940 aaPredicted RBP22.32■■□□□ 1.16
HDAC4-201ENST00000345617 CCDC94Q9BW85 323 aaPredicted RBP22.32■■□□□ 1.16
HDAC4-201ENST00000345617 GAPVD1Q14C86 1478 aa22.31■■□□□ 1.16
HDAC4-201ENST00000345617 NUP133Q8WUM0 1156 aa22.31■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms