RNA–Protein interactions for RNA: ENST00000345436.8

CKLF-202, Transcript of chemokine like factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKLF, Length 571 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKLF-202ENST00000345436 AKAP4Q5JQC9 854 aa23.99■■□□□ 1.43
CKLF-202ENST00000345436 PHF14O94880 888 aa23.98■■□□□ 1.43
CKLF-202ENST00000345436 TOGARAM1Q9Y4F4 1720 aa23.98■■□□□ 1.43
CKLF-202ENST00000345436 GNPATO15228 680 aa23.97■■□□□ 1.43
CKLF-202ENST00000345436 C5P01031 1676 aa23.97■■□□□ 1.43
CKLF-202ENST00000345436 MSL1Q68DK7 614 aa23.97■■□□□ 1.43
CKLF-202ENST00000345436 LINC00116Q8NCU8 138 aa23.97■■□□□ 1.43
CKLF-202ENST00000345436 CNGB1Q14028 1251 aaPredicted RBP23.96■■□□□ 1.43
CKLF-202ENST00000345436 CFAP53Q96M91 514 aa23.96■■□□□ 1.43
CKLF-202ENST00000345436 NFATC2IPQ8NCF5 419 aa23.95■■□□□ 1.42
CKLF-202ENST00000345436 RTCBQ9Y3I0 505 aaKnown RBP23.95■■□□□ 1.42
CKLF-202ENST00000345436 HMOX1P09601 288 aa23.94■■□□□ 1.42
CKLF-202ENST00000345436 ITPK1Q13572 414 aa23.94■■□□□ 1.42
CKLF-202ENST00000345436 TRAPPC3LQ5T215 181 aa23.94■■□□□ 1.42
CKLF-202ENST00000345436 RC3H1Q5TC82 1133 aaKnown RBP23.94■■□□□ 1.42
CKLF-202ENST00000345436 CD2APQ9Y5K6 639 aa23.94■■□□□ 1.42
CKLF-202ENST00000345436 C4BP0C0L5 1744 aa23.93■■□□□ 1.42
CKLF-202ENST00000345436 PELP1Q8IZL8 1130 aaKnown RBP23.93■■□□□ 1.42
CKLF-202ENST00000345436 U2SURPO15042 1029 aaKnown RBP23.92■■□□□ 1.42
CKLF-202ENST00000345436 ADRA2BP18089 450 aa23.92■■□□□ 1.42
CKLF-202ENST00000345436 KDM6AO15550 1401 aaPredicted RBP23.91■■□□□ 1.42
CKLF-202ENST00000345436 TUBGCP6Q96RT7 1819 aa23.9■■□□□ 1.42
CKLF-202ENST00000345436 GRIN3BO60391 1043 aa23.9■■□□□ 1.42
CKLF-202ENST00000345436 PTCD1O75127 700 aaKnown RBP23.9■■□□□ 1.42
CKLF-202ENST00000345436 NUDCQ9Y266 331 aa23.9■■□□□ 1.42
CKLF-202ENST00000345436 TAF1LQ8IZX4 1826 aa23.89■■□□□ 1.42
CKLF-202ENST00000345436 CNTNAP4Q9C0A0 1308 aa23.88■■□□□ 1.41
CKLF-202ENST00000345436 COL24A1Q17RW2 1714 aa23.88■■□□□ 1.41
CKLF-202ENST00000345436 RFC4P35249 363 aa23.88■■□□□ 1.41
CKLF-202ENST00000345436 NLGN1Q8N2Q7 840 aa23.88■■□□□ 1.41
CKLF-202ENST00000345436 SLC52A2Q9HAB3 445 aa23.88■■□□□ 1.41
CKLF-202ENST00000345436 RPS6KA4O75676 772 aa23.87■■□□□ 1.41
CKLF-202ENST00000345436 GAS2L2Q8NHY3 880 aa23.87■■□□□ 1.41
CKLF-202ENST00000345436 RNMTO43148 476 aaKnown RBP23.86■■□□□ 1.41
CKLF-202ENST00000345436 MTHFSDQ2M296 383 aaKnown RBP23.86■■□□□ 1.41
CKLF-202ENST00000345436 NLGN2Q8NFZ4 835 aa23.86■■□□□ 1.41
CKLF-202ENST00000345436 SLC4A9Q96Q91 983 aa23.85■■□□□ 1.41
CKLF-202ENST00000345436 AMIGO3Q86WK7 504 aa23.84■■□□□ 1.41
CKLF-202ENST00000345436 LGR6Q9HBX8 967 aa23.84■■□□□ 1.41
CKLF-202ENST00000345436 SMIM5Q71RC9 77 aa23.83■■□□□ 1.41
CKLF-202ENST00000345436 ARHGEF1Q92888 912 aaKnown RBP23.82■■□□□ 1.4
CKLF-202ENST00000345436 ZNF831Q5JPB2 1677 aa23.81■■□□□ 1.4
CKLF-202ENST00000345436 GNAT3A8MTJ3 354 aa23.81■■□□□ 1.4
CKLF-202ENST00000345436 MMP10P09238 476 aa23.8■■□□□ 1.4
CKLF-202ENST00000345436 CRKLP46109 303 aaKnown RBP23.8■■□□□ 1.4
CKLF-202ENST00000345436 TEFQ10587 303 aa23.8■■□□□ 1.4
CKLF-202ENST00000345436 UBR3Q6ZT12 1888 aa23.8■■□□□ 1.4
CKLF-202ENST00000345436 TTC5Q8N0Z6 440 aa23.8■■□□□ 1.4
CKLF-202ENST00000345436 PPP2R1AP30153 589 aa23.78■■□□□ 1.4
CKLF-202ENST00000345436 VSIG10Q8N0Z9 540 aa23.78■■□□□ 1.4
CKLF-202ENST00000345436 PARP3Q9Y6F1 533 aa23.78■■□□□ 1.4
CKLF-202ENST00000345436 NEFMP07197 916 aa23.76■■□□□ 1.39
CKLF-202ENST00000345436 U2AF1L5P0DN76 240 aaPredicted RBP23.76■■□□□ 1.39
CKLF-202ENST00000345436 U2AF1Q01081 240 aaKnown RBP eCLIP23.76■■□□□ 1.39
CKLF-202ENST00000345436 ZNF784Q8NCA9 323 aaPredicted RBP23.76■■□□□ 1.39
CKLF-202ENST00000345436 CCDC87Q9NVE4 849 aa23.76■■□□□ 1.39
CKLF-202ENST00000345436 ZPR1O75312 459 aa23.75■■□□□ 1.39
CKLF-202ENST00000345436 SLC39A6Q13433 755 aa23.75■■□□□ 1.39
CKLF-202ENST00000345436 FCHSD2O94868 740 aa23.74■■□□□ 1.39
CKLF-202ENST00000345436 STARD3NLO95772 234 aa23.74■■□□□ 1.39
CKLF-202ENST00000345436 GYS1P13807 737 aa23.74■■□□□ 1.39
CKLF-202ENST00000345436 PRKAR2BP31323 418 aa23.74■■□□□ 1.39
CKLF-202ENST00000345436 TGFB2P61812 414 aa23.74■■□□□ 1.39
CKLF-202ENST00000345436 DNAJC10Q8IXB1 793 aa23.74■■□□□ 1.39
CKLF-202ENST00000345436 TEX13AQ9BXU3 409 aaPredicted RBP23.74■■□□□ 1.39
CKLF-202ENST00000345436 COL3A1P02461 1466 aaPredicted RBP23.74■■□□□ 1.39
CKLF-202ENST00000345436 SCN11AQ9UI33 1791 aa23.73■■□□□ 1.39
CKLF-202ENST00000345436 YBX3P16989 372 aaKnown RBP eCLIP23.73■■□□□ 1.391e-7■■■■□ 20.5
CKLF-202ENST00000345436 RTF1Q92541 710 aaKnown RBP23.73■■□□□ 1.39
CKLF-202ENST00000345436 INTS5Q6P9B9 1019 aaKnown RBP23.72■■□□□ 1.39
CKLF-202ENST00000345436 CHD4Q14839 1912 aa23.71■■□□□ 1.39
CKLF-202ENST00000345436 MRC1P22897 1456 aa23.71■■□□□ 1.39
CKLF-202ENST00000345436 CYP19A1P11511 503 aaPredicted RBP23.71■■□□□ 1.39
CKLF-202ENST00000345436 NPM2Q86SE8 214 aaKnown RBP23.71■■□□□ 1.39
CKLF-202ENST00000345436 RSPH6AQ9H0K4 717 aa23.71■■□□□ 1.39
CKLF-202ENST00000345436 IL17REQ8NFR9 667 aa23.7■■□□□ 1.38
CKLF-202ENST00000345436 USP42Q9H9J4 1324 aaKnown RBP23.69■■□□□ 1.38
CKLF-202ENST00000345436 PNNQ9H307 717 aaKnown RBP23.69■■□□□ 1.38
CKLF-202ENST00000345436 ZNF790Q6PG37 636 aa23.68■■□□□ 1.38
CKLF-202ENST00000345436 A0A087WZG4 1122 aa23.67■■□□□ 1.38
CKLF-202ENST00000345436 PHACTR3Q96KR7 559 aa23.67■■□□□ 1.38
CKLF-202ENST00000345436 FMNL2Q96PY5 1086 aa23.67■■□□□ 1.38
CKLF-202ENST00000345436 COL5A3P25940 1745 aaPredicted RBP23.67■■□□□ 1.38
CKLF-202ENST00000345436 HTATSF1O43719 755 aaKnown RBP23.66■■□□□ 1.38
CKLF-202ENST00000345436 SOS1Q07889 1333 aaPredicted RBP23.65■■□□□ 1.38
CKLF-202ENST00000345436 BTBD11A6QL63 1104 aa23.65■■□□□ 1.38
CKLF-202ENST00000345436 SRP68Q9UHB9 627 aaKnown RBP23.65■■□□□ 1.38
CKLF-202ENST00000345436 NARFQ9UHQ1 456 aa23.65■■□□□ 1.38
CKLF-202ENST00000345436 FKBP8Q14318 412 aa23.64■■□□□ 1.37
CKLF-202ENST00000345436 USPL1Q5W0Q7 1092 aa23.64■■□□□ 1.37
CKLF-202ENST00000345436 CANXP27824 592 aaKnown RBP23.63■■□□□ 1.37
CKLF-202ENST00000345436 ZNF496Q96IT1 587 aaPredicted RBP23.63■■□□□ 1.37
CKLF-202ENST00000345436 ZBTB1Q9Y2K1 713 aa23.62■■□□□ 1.37
CKLF-202ENST00000345436 CEMIPQ8WUJ3 1361 aa23.62■■□□□ 1.37
CKLF-202ENST00000345436 HEG1Q9ULI3 1381 aa23.62■■□□□ 1.37
CKLF-202ENST00000345436 CICQ96RK0 1608 aaPredicted RBP23.62■■□□□ 1.37
CKLF-202ENST00000345436 UTRNP46939 3433 aa23.62■■□□□ 1.37
CKLF-202ENST00000345436 ADAMTS7Q9UKP4 1686 aa23.61■■□□□ 1.37
CKLF-202ENST00000345436 A0A0G2JLW4 131 aa23.61■■□□□ 1.37
CKLF-202ENST00000345436 RALBP1Q15311 655 aa23.61■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms