RNA–Protein interactions for RNA: ENST00000345008.6

LYPD1-201, Transcript of LY6/PLAUR domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LYPD1, Length 1,033 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYPD1-201ENST00000345008 ATP6V1AP38606 617 aa26.62■■□□□ 1.85
LYPD1-201ENST00000345008 ATG3Q9NT62 314 aa26.62■■□□□ 1.85
LYPD1-201ENST00000345008 LINC00116Q8NCU8 138 aa26.61■■□□□ 1.85
LYPD1-201ENST00000345008 KDM6AO15550 1401 aaPredicted RBP26.6■■□□□ 1.85
LYPD1-201ENST00000345008 PHF14O94880 888 aa26.6■■□□□ 1.85
LYPD1-201ENST00000345008 CHD4Q14839 1912 aa26.59■■□□□ 1.85
LYPD1-201ENST00000345008 CABP4P57796 275 aa26.59■■□□□ 1.85
LYPD1-201ENST00000345008 SSFA2P28290 1259 aa26.58■■□□□ 1.85
LYPD1-201ENST00000345008 ITPK1Q13572 414 aa26.58■■□□□ 1.85
LYPD1-201ENST00000345008 NPC1L1Q9UHC9 1359 aa26.58■■□□□ 1.84
LYPD1-201ENST00000345008 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP26.57■■□□□ 1.84
LYPD1-201ENST00000345008 GPR162Q16538 588 aa26.57■■□□□ 1.84
LYPD1-201ENST00000345008 AMIGO3Q86WK7 504 aa26.57■■□□□ 1.84
LYPD1-201ENST00000345008 RBM42Q9BTD8 480 aaKnown RBP26.57■■□□□ 1.84
LYPD1-201ENST00000345008 CNGB1Q14028 1251 aaPredicted RBP26.56■■□□□ 1.84
LYPD1-201ENST00000345008 ZNF831Q5JPB2 1677 aa26.55■■□□□ 1.84
LYPD1-201ENST00000345008 GNPATO15228 680 aa26.55■■□□□ 1.84
LYPD1-201ENST00000345008 SCN11AQ9UI33 1791 aa26.55■■□□□ 1.84
LYPD1-201ENST00000345008 DIAPH1O60610 1272 aaKnown RBP26.54■■□□□ 1.84
LYPD1-201ENST00000345008 SMIM5Q71RC9 77 aa26.54■■□□□ 1.84
LYPD1-201ENST00000345008 NLGN2Q8NFZ4 835 aa26.54■■□□□ 1.84
LYPD1-201ENST00000345008 HMOX1P09601 288 aa26.53■■□□□ 1.84
LYPD1-201ENST00000345008 PELP1Q8IZL8 1130 aaKnown RBP26.53■■□□□ 1.84
LYPD1-201ENST00000345008 GOLGB1Q14789 3259 aaKnown RBP26.52■■□□□ 1.84
LYPD1-201ENST00000345008 AKAP4Q5JQC9 854 aa26.51■■□□□ 1.83
LYPD1-201ENST00000345008 COL5A3P25940 1745 aaPredicted RBP26.51■■□□□ 1.83
LYPD1-201ENST00000345008 NFATC2IPQ8NCF5 419 aa26.5■■□□□ 1.83
LYPD1-201ENST00000345008 SLC4A9Q96Q91 983 aa26.5■■□□□ 1.83
LYPD1-201ENST00000345008 VIRMAQ69YN4 1812 aaKnown RBP26.49■■□□□ 1.83
LYPD1-201ENST00000345008 RTCBQ9Y3I0 505 aaKnown RBP26.48■■□□□ 1.83
LYPD1-201ENST00000345008 PTCD1O75127 700 aaKnown RBP26.47■■□□□ 1.83
LYPD1-201ENST00000345008 CD2APQ9Y5K6 639 aa26.47■■□□□ 1.83
LYPD1-201ENST00000345008 RC3H1Q5TC82 1133 aaKnown RBP26.46■■□□□ 1.83
LYPD1-201ENST00000345008 COL3A1P02461 1466 aaPredicted RBP26.46■■□□□ 1.83
LYPD1-201ENST00000345008 CNTNAP4Q9C0A0 1308 aa26.45■■□□□ 1.83
LYPD1-201ENST00000345008 MYH14Q7Z406 1995 aaKnown RBP26.45■■□□□ 1.82
LYPD1-201ENST00000345008 U2SURPO15042 1029 aaKnown RBP26.44■■□□□ 1.82
LYPD1-201ENST00000345008 TRAPPC3LQ5T215 181 aa26.44■■□□□ 1.82
LYPD1-201ENST00000345008 SLC52A2Q9HAB3 445 aa26.43■■□□□ 1.82
LYPD1-201ENST00000345008 RNMTO43148 476 aaKnown RBP26.42■■□□□ 1.82
LYPD1-201ENST00000345008 ADRA2BP18089 450 aa26.42■■□□□ 1.82
LYPD1-201ENST00000345008 MTHFSDQ2M296 383 aaKnown RBP26.42■■□□□ 1.82
LYPD1-201ENST00000345008 LGR6Q9HBX8 967 aa26.42■■□□□ 1.82
LYPD1-201ENST00000345008 RPS6KA4O75676 772 aa26.41■■□□□ 1.82
LYPD1-201ENST00000345008 MRC1P22897 1456 aa26.41■■□□□ 1.82
LYPD1-201ENST00000345008 CICQ96RK0 1608 aaPredicted RBP26.4■■□□□ 1.82
LYPD1-201ENST00000345008 TJP1Q07157 1748 aa26.4■■□□□ 1.82
LYPD1-201ENST00000345008 ZNF784Q8NCA9 323 aaPredicted RBP26.4■■□□□ 1.82
LYPD1-201ENST00000345008 CFAP53Q96M91 514 aa26.4■■□□□ 1.82
LYPD1-201ENST00000345008 GRIN3BO60391 1043 aa26.39■■□□□ 1.82
LYPD1-201ENST00000345008 YBX3P16989 372 aaKnown RBP eCLIP26.39■■□□□ 1.82
LYPD1-201ENST00000345008 ARHGEF1Q92888 912 aaKnown RBP26.39■■□□□ 1.82
LYPD1-201ENST00000345008 ADAMTS7Q9UKP4 1686 aa26.38■■□□□ 1.81
LYPD1-201ENST00000345008 RFC4P35249 363 aa26.38■■□□□ 1.81
LYPD1-201ENST00000345008 CRKLP46109 303 aaKnown RBP26.38■■□□□ 1.81
LYPD1-201ENST00000345008 C4AP0C0L4 1744 aa26.38■■□□□ 1.81
LYPD1-201ENST00000345008 MMP10P09238 476 aa26.37■■□□□ 1.81
LYPD1-201ENST00000345008 NLGN1Q8N2Q7 840 aa26.37■■□□□ 1.81
LYPD1-201ENST00000345008 SLC39A6Q13433 755 aa26.34■■□□□ 1.81
LYPD1-201ENST00000345008 GAS2L2Q8NHY3 880 aa26.34■■□□□ 1.81
LYPD1-201ENST00000345008 GYS1P13807 737 aa26.32■■□□□ 1.8
LYPD1-201ENST00000345008 DNAJC10Q8IXB1 793 aa26.32■■□□□ 1.8
LYPD1-201ENST00000345008 NUDCQ9Y266 331 aa26.32■■□□□ 1.8
LYPD1-201ENST00000345008 KIF13BQ9NQT8 1826 aa26.3■■□□□ 1.8
LYPD1-201ENST00000345008 KCPQ6ZWJ8 1503 aa26.3■■□□□ 1.8
LYPD1-201ENST00000345008 GNAT3A8MTJ3 354 aa26.3■■□□□ 1.8
LYPD1-201ENST00000345008 PPP2R1AP30153 589 aa26.3■■□□□ 1.8
LYPD1-201ENST00000345008 INTS5Q6P9B9 1019 aaKnown RBP26.29■■□□□ 1.8
LYPD1-201ENST00000345008 CCDC87Q9NVE4 849 aa26.29■■□□□ 1.8
LYPD1-201ENST00000345008 UBR2Q8IWV8 1755 aa26.28■■□□□ 1.8
LYPD1-201ENST00000345008 PRKAR2BP31323 418 aa26.28■■□□□ 1.8
LYPD1-201ENST00000345008 TEFQ10587 303 aa26.28■■□□□ 1.8
LYPD1-201ENST00000345008 PARP3Q9Y6F1 533 aa26.28■■□□□ 1.8
LYPD1-201ENST00000345008 TTC5Q8N0Z6 440 aa26.27■■□□□ 1.8
LYPD1-201ENST00000345008 SRP68Q9UHB9 627 aaKnown RBP26.27■■□□□ 1.8
LYPD1-201ENST00000345008 WWC3Q9ULE0 1092 aa26.27■■□□□ 1.8
LYPD1-201ENST00000345008 USP42Q9H9J4 1324 aaKnown RBP26.27■■□□□ 1.8
LYPD1-201ENST00000345008 CYP19A1P11511 503 aaPredicted RBP26.26■■□□□ 1.79
LYPD1-201ENST00000345008 VSIG10Q8N0Z9 540 aa26.26■■□□□ 1.79
LYPD1-201ENST00000345008 RSPH6AQ9H0K4 717 aa26.26■■□□□ 1.79
LYPD1-201ENST00000345008 C10orf71Q711Q0 1435 aa26.25■■□□□ 1.79
LYPD1-201ENST00000345008 U2AF1L5P0DN76 240 aaPredicted RBP26.25■■□□□ 1.79
LYPD1-201ENST00000345008 U2AF1Q01081 240 aaKnown RBP eCLIP26.25■■□□□ 1.79
LYPD1-201ENST00000345008 IL17REQ8NFR9 667 aa26.25■■□□□ 1.79
LYPD1-201ENST00000345008 SIPA1L3O60292 1781 aaPredicted RBP26.25■■□□□ 1.79
LYPD1-201ENST00000345008 N4BP2Q86UW6 1770 aaPredicted RBP26.24■■□□□ 1.79
LYPD1-201ENST00000345008 PXDNLA1KZ92 1463 aa26.23■■□□□ 1.79
LYPD1-201ENST00000345008 SOS1Q07889 1333 aaPredicted RBP26.23■■□□□ 1.79
LYPD1-201ENST00000345008 TGFB2P61812 414 aa26.23■■□□□ 1.79
LYPD1-201ENST00000345008 PHACTR3Q96KR7 559 aa26.23■■□□□ 1.79
LYPD1-201ENST00000345008 KIAA1551Q9HCM1 1747 aa26.22■■□□□ 1.79
LYPD1-201ENST00000345008 ZPR1O75312 459 aa26.22■■□□□ 1.79
LYPD1-201ENST00000345008 FKBP8Q14318 412 aa26.22■■□□□ 1.79
LYPD1-201ENST00000345008 ZBTB1Q9Y2K1 713 aa26.21■■□□□ 1.79
LYPD1-201ENST00000345008 ZNF790Q6PG37 636 aa26.2■■□□□ 1.78
LYPD1-201ENST00000345008 COL15A1P39059 1388 aa26.2■■□□□ 1.78
LYPD1-201ENST00000345008 CEMIPQ8WUJ3 1361 aa26.2■■□□□ 1.78
LYPD1-201ENST00000345008 FCHSD2O94868 740 aa26.19■■□□□ 1.78
LYPD1-201ENST00000345008 A0A0G2JLW4 131 aa26.18■■□□□ 1.78
LYPD1-201ENST00000345008 STARD3NLO95772 234 aa26.18■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms