RNA–Protein interactions for RNA: ENST00000344425.7

KCNQ2-201, Transcript of potassium voltage-gated channel subfamily Q member 2, humanhuman

TSL 1 (best) BASIC

Gene KCNQ2, Length 1,426 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ2-201ENST00000344425 IGSF1Q8N6C5 1336 aa27.52■■■□□ 2
KCNQ2-201ENST00000344425 HSP90AB1P08238 724 aaKnown RBP27.51■■□□□ 1.99
KCNQ2-201ENST00000344425 ERVV-2B6SEH9 535 aa27.5■■□□□ 1.99
KCNQ2-201ENST00000344425 PLEKHO1Q53GL0 409 aaPredicted RBP27.5■■□□□ 1.99
KCNQ2-201ENST00000344425 PANK3Q9H999 370 aa27.5■■□□□ 1.99
KCNQ2-201ENST00000344425 ATP10DQ9P241 1426 aa27.49■■□□□ 1.99
KCNQ2-201ENST00000344425 DCAF5Q96JK2 942 aa27.49■■□□□ 1.99
KCNQ2-201ENST00000344425 GPBP1L1Q9HC44 474 aaPredicted RBP27.47■■□□□ 1.99
KCNQ2-201ENST00000344425 RTCBQ9Y3I0 505 aaKnown RBP27.47■■□□□ 1.99
KCNQ2-201ENST00000344425 HSPA5P11021 654 aaKnown RBP27.46■■□□□ 1.99
KCNQ2-201ENST00000344425 AMOTQ4VCS5 1084 aa27.46■■□□□ 1.99
KCNQ2-201ENST00000344425 TRAPPC3LQ5T215 181 aa27.46■■□□□ 1.99
KCNQ2-201ENST00000344425 RBM42Q9BTD8 480 aaKnown RBP27.46■■□□□ 1.99
KCNQ2-201ENST00000344425 MMP10P09238 476 aa27.44■■□□□ 1.98
KCNQ2-201ENST00000344425 WWC3Q9ULE0 1092 aa27.44■■□□□ 1.98
KCNQ2-201ENST00000344425 KDRP35968 1356 aa27.44■■□□□ 1.98
KCNQ2-201ENST00000344425 RC3H1Q5TC82 1133 aaKnown RBP27.43■■□□□ 1.98
KCNQ2-201ENST00000344425 ZNF530Q6P9A1 599 aaPredicted RBP27.43■■□□□ 1.98
KCNQ2-201ENST00000344425 NLGN1Q8N2Q7 840 aa27.43■■□□□ 1.98
KCNQ2-201ENST00000344425 CABP4P57796 275 aa27.42■■□□□ 1.98
KCNQ2-201ENST00000344425 MORC1Q86VD1 984 aa27.42■■□□□ 1.98
KCNQ2-201ENST00000344425 ADRA2BP18089 450 aa27.41■■□□□ 1.98
KCNQ2-201ENST00000344425 ADCY9O60503 1353 aa27.41■■□□□ 1.98
KCNQ2-201ENST00000344425 SLC4A9Q96Q91 983 aa27.41■■□□□ 1.98
KCNQ2-201ENST00000344425 C1orf141Q5JVX7 400 aa27.4■■□□□ 1.98
KCNQ2-201ENST00000344425 MTHFSP49914 203 aa27.39■■□□□ 1.97
KCNQ2-201ENST00000344425 CNTNAP4Q9C0A0 1308 aa27.39■■□□□ 1.97
KCNQ2-201ENST00000344425 RFC4P35249 363 aa27.38■■□□□ 1.97
KCNQ2-201ENST00000344425 TGFB2P61812 414 aa27.38■■□□□ 1.97
KCNQ2-201ENST00000344425 ZNF526Q8TF50 670 aaPredicted RBP27.38■■□□□ 1.97
KCNQ2-201ENST00000344425 ARHGEF1Q92888 912 aaKnown RBP27.38■■□□□ 1.97
KCNQ2-201ENST00000344425 ZNF831Q5JPB2 1677 aa27.37■■□□□ 1.97
KCNQ2-201ENST00000344425 RPS6KA4O75676 772 aa27.37■■□□□ 1.97
KCNQ2-201ENST00000344425 KDM6AO15550 1401 aaPredicted RBP27.36■■□□□ 1.97
KCNQ2-201ENST00000344425 KNSTRNQ9Y448 316 aa27.36■■□□□ 1.97
KCNQ2-201ENST00000344425 AEBP1Q8IUX7 1158 aa27.34■■□□□ 1.97
KCNQ2-201ENST00000344425 CCDC87Q9NVE4 849 aa27.34■■□□□ 1.97
KCNQ2-201ENST00000344425 GYS1P13807 737 aa27.33■■□□□ 1.97
KCNQ2-201ENST00000344425 SULT6B1Q6IMI4 303 aa27.33■■□□□ 1.97
KCNQ2-201ENST00000344425 PTCD1O75127 700 aaKnown RBP27.33■■□□□ 1.96
KCNQ2-201ENST00000344425 NFATC2IPQ8NCF5 419 aa27.33■■□□□ 1.96
KCNQ2-201ENST00000344425 PARP3Q9Y6F1 533 aa27.33■■□□□ 1.96
KCNQ2-201ENST00000344425 PXDNLA1KZ92 1463 aa27.32■■□□□ 1.96
KCNQ2-201ENST00000344425 CICQ96RK0 1608 aaPredicted RBP27.31■■□□□ 1.96
KCNQ2-201ENST00000344425 A0A0G2JLW4 131 aa27.31■■□□□ 1.96
KCNQ2-201ENST00000344425 BCS1LQ9Y276 419 aa27.31■■□□□ 1.96
KCNQ2-201ENST00000344425 COL5A3P25940 1745 aaPredicted RBP27.29■■□□□ 1.96
KCNQ2-201ENST00000344425 C10orf71Q711Q0 1435 aa27.29■■□□□ 1.96
KCNQ2-201ENST00000344425 IL13P35225 146 aa27.29■■□□□ 1.96
KCNQ2-201ENST00000344425 CCER1Q8TC90 406 aaPredicted RBP27.28■■□□□ 1.96
KCNQ2-201ENST00000344425 KIF13BQ9NQT8 1826 aa27.28■■□□□ 1.96
KCNQ2-201ENST00000344425 CEP350Q5VT06 3117 aa27.28■■□□□ 1.96
KCNQ2-201ENST00000344425 CRKLP46109 303 aaKnown RBP27.27■■□□□ 1.96
KCNQ2-201ENST00000344425 HSPA6P17066 643 aa27.26■■□□□ 1.95
KCNQ2-201ENST00000344425 DPEP1P16444 411 aa27.25■■□□□ 1.95
KCNQ2-201ENST00000344425 AKAP4Q5JQC9 854 aa27.25■■□□□ 1.95
KCNQ2-201ENST00000344425 C4AP0C0L4 1744 aa27.25■■□□□ 1.95
KCNQ2-201ENST00000344425 FCHSD2O94868 740 aa27.24■■□□□ 1.95
KCNQ2-201ENST00000344425 ARHGAP27Q6ZUM4 889 aa27.24■■□□□ 1.95
KCNQ2-201ENST00000344425 KIF3CO14782 793 aa27.23■■□□□ 1.95
KCNQ2-201ENST00000344425 N4BP2Q86UW6 1770 aaPredicted RBP27.22■■□□□ 1.95
KCNQ2-201ENST00000344425 MYH14Q7Z406 1995 aaKnown RBP27.22■■□□□ 1.95
KCNQ2-201ENST00000344425 KIAA1551Q9HCM1 1747 aa27.22■■□□□ 1.95
KCNQ2-201ENST00000344425 AMER1Q5JTC6 1135 aaPredicted RBP27.22■■□□□ 1.95
KCNQ2-201ENST00000344425 USP42Q9H9J4 1324 aaKnown RBP27.22■■□□□ 1.95
KCNQ2-201ENST00000344425 SLC52A2Q9HAB3 445 aa27.21■■□□□ 1.95
KCNQ2-201ENST00000344425 SRP68Q9UHB9 627 aaKnown RBP27.21■■□□□ 1.95
KCNQ2-201ENST00000344425 FKBP8Q14318 412 aa27.19■■□□□ 1.94
KCNQ2-201ENST00000344425 PIM2Q9P1W9 311 aa27.19■■□□□ 1.94
KCNQ2-201ENST00000344425 INTS5Q6P9B9 1019 aaKnown RBP27.18■■□□□ 1.94
KCNQ2-201ENST00000344425 KCNA3P22001 575 aa27.17■■□□□ 1.94
KCNQ2-201ENST00000344425 ZPR1O75312 459 aa27.16■■□□□ 1.94
KCNQ2-201ENST00000344425 DNAJC10Q8IXB1 793 aa27.16■■□□□ 1.94
KCNQ2-201ENST00000344425 LGR6Q9HBX8 967 aa27.16■■□□□ 1.94
KCNQ2-201ENST00000344425 SCN11AQ9UI33 1791 aa27.16■■□□□ 1.94
KCNQ2-201ENST00000344425 RNMTO43148 476 aaKnown RBP27.16■■□□□ 1.94
KCNQ2-201ENST00000344425 HMOX1P09601 288 aa27.15■■□□□ 1.94
KCNQ2-201ENST00000344425 DDR1Q08345 913 aa27.15■■□□□ 1.94
KCNQ2-201ENST00000344425 DALRD3Q5D0E6 543 aaKnown RBP27.15■■□□□ 1.94
KCNQ2-201ENST00000344425 TJP1Q07157 1748 aa27.14■■□□□ 1.94
KCNQ2-201ENST00000344425 KIF7Q2M1P5 1343 aa27.14■■□□□ 1.93
KCNQ2-201ENST00000344425 TOMM70O94826 608 aa27.14■■□□□ 1.93
KCNQ2-201ENST00000344425 TM4SF1P30408 202 aa27.13■■□□□ 1.93
KCNQ2-201ENST00000344425 DIAPH1O60610 1272 aaKnown RBP27.12■■□□□ 1.93
KCNQ2-201ENST00000344425 USPL1Q5W0Q7 1092 aa27.12■■□□□ 1.93
KCNQ2-201ENST00000344425 SOS1Q07889 1333 aaPredicted RBP27.11■■□□□ 1.93
KCNQ2-201ENST00000344425 POLRMTO00411 1230 aaKnown RBP27.11■■□□□ 1.93
KCNQ2-201ENST00000344425 CYP19A1P11511 503 aaPredicted RBP27.11■■□□□ 1.93
KCNQ2-201ENST00000344425 SLC39A6Q13433 755 aa27.11■■□□□ 1.93
KCNQ2-201ENST00000344425 C9orf131Q5VYM1 1079 aa27.11■■□□□ 1.93
KCNQ2-201ENST00000344425 MTHFSDQ2M296 383 aaKnown RBP27.1■■□□□ 1.93
KCNQ2-201ENST00000344425 BRCA1P38398 1863 aaKnown RBP27.1■■□□□ 1.93
KCNQ2-201ENST00000344425 MRC1P22897 1456 aa27.09■■□□□ 1.93
KCNQ2-201ENST00000344425 IFFO2Q5TF58 517 aa27.09■■□□□ 1.93
KCNQ2-201ENST00000344425 PER1O15534 1290 aaPredicted RBP27.08■■□□□ 1.93
KCNQ2-201ENST00000344425 APLP1P51693 650 aa27.08■■□□□ 1.93
KCNQ2-201ENST00000344425 VSIG10Q8N0Z9 540 aa27.08■■□□□ 1.93
KCNQ2-201ENST00000344425 NARFQ9UHQ1 456 aa27.08■■□□□ 1.93
KCNQ2-201ENST00000344425 CHRNA5P30532 468 aa27.07■■□□□ 1.92
KCNQ2-201ENST00000344425 CC2D1BQ5T0F9 858 aaKnown RBP27.07■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms