RNA–Protein interactions for RNA: ENST00000344085.9

ZNF880-201, Transcript of zinc finger protein 880, humanhuman

TSL 1 (best) BASIC

Gene ZNF880, Length 496 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF880-201ENST00000344085 CCDC87Q9NVE4 849 aa12.99□□□□□ -0.33
ZNF880-201ENST00000344085 ASAP1Q9ULH1 1129 aa12.99□□□□□ -0.33
ZNF880-201ENST00000344085 RTCBQ9Y3I0 505 aaKnown RBP12.99□□□□□ -0.33
ZNF880-201ENST00000344085 EMILIN1Q9Y6C2 1016 aa12.99□□□□□ -0.33
ZNF880-201ENST00000344085 NCAPD2Q15021 1401 aa12.98□□□□□ -0.33
ZNF880-201ENST00000344085 C10orf71Q711Q0 1435 aa12.98□□□□□ -0.33
ZNF880-201ENST00000344085 PLEKHG2Q9H7P9 1386 aa12.98□□□□□ -0.33
ZNF880-201ENST00000344085 FCHSD2O94868 740 aa12.98□□□□□ -0.33
ZNF880-201ENST00000344085 CDCA8Q53HL2 280 aa12.98□□□□□ -0.33
ZNF880-201ENST00000344085 TRAPPC3LQ5T215 181 aa12.98□□□□□ -0.33
ZNF880-201ENST00000344085 IFNL2Q8IZJ0 200 aa12.98□□□□□ -0.33
ZNF880-201ENST00000344085 DNAJC5GQ8N7S2 189 aa12.98□□□□□ -0.33
ZNF880-201ENST00000344085 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.98□□□□□ -0.33
ZNF880-201ENST00000344085 KIF13BQ9NQT8 1826 aa12.97□□□□□ -0.33
ZNF880-201ENST00000344085 RBM46Q8TBY0 533 aaKnown RBP12.97□□□□□ -0.33
ZNF880-201ENST00000344085 N4BP2Q86UW6 1770 aaPredicted RBP12.97□□□□□ -0.33
ZNF880-201ENST00000344085 WDR90Q96KV7 1748 aa12.96□□□□□ -0.33
ZNF880-201ENST00000344085 KIAA1551Q9HCM1 1747 aa12.96□□□□□ -0.33
ZNF880-201ENST00000344085 PHKG2P15735 406 aa12.96□□□□□ -0.33
ZNF880-201ENST00000344085 DPEP1P16444 411 aa12.96□□□□□ -0.33
ZNF880-201ENST00000344085 ADRA2BP18089 450 aa12.96□□□□□ -0.33
ZNF880-201ENST00000344085 ATG3Q9NT62 314 aa12.96□□□□□ -0.33
ZNF880-201ENST00000344085 PARP3Q9Y6F1 533 aa12.96□□□□□ -0.33
ZNF880-201ENST00000344085 KDM2BQ8NHM5 1336 aa12.95□□□□□ -0.34
ZNF880-201ENST00000344085 RFC4P35249 363 aa12.95□□□□□ -0.34
ZNF880-201ENST00000344085 C9orf131Q5VYM1 1079 aa12.95□□□□□ -0.34
ZNF880-201ENST00000344085 KLRG1Q96E93 195 aa12.95□□□□□ -0.34
ZNF880-201ENST00000344085 RBM42Q9BTD8 480 aaKnown RBP12.95□□□□□ -0.34
ZNF880-201ENST00000344085 KDRP35968 1356 aa12.94□□□□□ -0.34
ZNF880-201ENST00000344085 C4AP0C0L4 1744 aa12.94□□□□□ -0.34
ZNF880-201ENST00000344085 FSTL1Q12841 308 aa12.94□□□□□ -0.34
ZNF880-201ENST00000344085 EYA1Q99502 592 aa12.94□□□□□ -0.34
ZNF880-201ENST00000344085 WASHC2AQ641Q2 1341 aa12.93□□□□□ -0.34
ZNF880-201ENST00000344085 GYS1P13807 737 aa12.93□□□□□ -0.34
ZNF880-201ENST00000344085 RC3H1Q5TC82 1133 aaKnown RBP12.93□□□□□ -0.34
ZNF880-201ENST00000344085 ARHGEF1Q92888 912 aaKnown RBP12.93□□□□□ -0.34
ZNF880-201ENST00000344085 PIM2Q9P1W9 311 aa12.93□□□□□ -0.34
ZNF880-201ENST00000344085 ANKRD26Q9UPS8 1709 aa12.93□□□□□ -0.34
ZNF880-201ENST00000344085 CNTNAP4Q9C0A0 1308 aa12.92□□□□□ -0.34
ZNF880-201ENST00000344085 RNF181Q9P0P0 153 aa12.92□□□□□ -0.34
ZNF880-201ENST00000344085 ERVV-2B6SEH9 535 aa12.91□□□□□ -0.34
ZNF880-201ENST00000344085 RPS6KA4O75676 772 aa12.91□□□□□ -0.34
ZNF880-201ENST00000344085 CAPN15O75808 1086 aa12.91□□□□□ -0.34
ZNF880-201ENST00000344085 HSP90AB1P08238 724 aaKnown RBP12.91□□□□□ -0.34
ZNF880-201ENST00000344085 HTRA3P83110 453 aa12.91□□□□□ -0.34
ZNF880-201ENST00000344085 DALRD3Q5D0E6 543 aaKnown RBP12.91□□□□□ -0.34
ZNF880-201ENST00000344085 COL13A1Q5TAT6 717 aaPredicted RBP12.91□□□□□ -0.34
ZNF880-201ENST00000344085 JMYQ8N9B5 988 aa12.91□□□□□ -0.34
ZNF880-201ENST00000344085 CARD14Q9BXL6 1004 aa12.91□□□□□ -0.34
ZNF880-201ENST00000344085 ZNF831Q5JPB2 1677 aa12.91□□□□□ -0.34
ZNF880-201ENST00000344085 KCPQ6ZWJ8 1503 aa12.91□□□□□ -0.34
ZNF880-201ENST00000344085 TNS4Q8IZW8 715 aa12.9□□□□□ -0.34
ZNF880-201ENST00000344085 DCAF5Q96JK2 942 aa12.9□□□□□ -0.34
ZNF880-201ENST00000344085 SLC4A9Q96Q91 983 aa12.9□□□□□ -0.34
ZNF880-201ENST00000344085 BRCA1P38398 1863 aaKnown RBP12.9□□□□□ -0.34
ZNF880-201ENST00000344085 COL5A3P25940 1745 aaPredicted RBP12.89□□□□□ -0.35
ZNF880-201ENST00000344085 KCNA3P22001 575 aa12.89□□□□□ -0.35
ZNF880-201ENST00000344085 CABP4P57796 275 aa12.89□□□□□ -0.35
ZNF880-201ENST00000344085 SMC1BQ8NDV3 1235 aa12.89□□□□□ -0.35
ZNF880-201ENST00000344085 ARFGEF1Q9Y6D6 1849 aa12.89□□□□□ -0.35
ZNF880-201ENST00000344085 EIF4A2Q14240 407 aaKnown RBP12.88□□□□□ -0.35
ZNF880-201ENST00000344085 RRAGCQ9HB90 399 aa12.88□□□□□ -0.35
ZNF880-201ENST00000344085 POLKQ9UBT6 870 aa12.88□□□□□ -0.35
ZNF880-201ENST00000344085 TNRC6CQ9HCJ0 1690 aaKnown RBP12.88□□□□□ -0.35
ZNF880-201ENST00000344085 PTCD1O75127 700 aaKnown RBP12.87□□□□□ -0.35
ZNF880-201ENST00000344085 PLEKHO1Q53GL0 409 aaPredicted RBP12.87□□□□□ -0.35
ZNF880-201ENST00000344085 TNNT2P45379 298 aaPredicted RBP12.86□□□□□ -0.35
ZNF880-201ENST00000344085 CRKLP46109 303 aaKnown RBP12.86□□□□□ -0.35
ZNF880-201ENST00000344085 FKBP8Q14318 412 aa12.86□□□□□ -0.35
ZNF880-201ENST00000344085 ZNF530Q6P9A1 599 aaPredicted RBP12.86□□□□□ -0.35
ZNF880-201ENST00000344085 SRP68Q9UHB9 627 aaKnown RBP12.86□□□□□ -0.35
ZNF880-201ENST00000344085 USP42Q9H9J4 1324 aaKnown RBP12.86□□□□□ -0.35
ZNF880-201ENST00000344085 ZC3H4Q9UPT8 1303 aaKnown RBP12.86□□□□□ -0.35
ZNF880-201ENST00000344085 CHRNA5P30532 468 aa12.85□□□□□ -0.35
ZNF880-201ENST00000344085 DDR1Q08345 913 aa12.85□□□□□ -0.35
ZNF880-201ENST00000344085 AMOTQ4VCS5 1084 aa12.85□□□□□ -0.35
ZNF880-201ENST00000344085 C1orf141Q5JVX7 400 aa12.85□□□□□ -0.35
ZNF880-201ENST00000344085 KDM6AO15550 1401 aaPredicted RBP12.85□□□□□ -0.35
ZNF880-201ENST00000344085 MTHFSP49914 203 aa12.84□□□□□ -0.35
ZNF880-201ENST00000344085 PRELPP51888 382 aa12.84□□□□□ -0.35
ZNF880-201ENST00000344085 ZPR1O75312 459 aa12.83□□□□□ -0.36
ZNF880-201ENST00000344085 POLRMTO00411 1230 aaKnown RBP12.82□□□□□ -0.36
ZNF880-201ENST00000344085 HSPA1AP0DMV8 641 aaKnown RBP12.82□□□□□ -0.36
ZNF880-201ENST00000344085 HSPA1BP0DMV9 641 aaKnown RBP12.82□□□□□ -0.36
ZNF880-201ENST00000344085 VEGFAP15692 232 aaPredicted RBP12.82□□□□□ -0.36
ZNF880-201ENST00000344085 LMNB1P20700 586 aa12.82□□□□□ -0.36
ZNF880-201ENST00000344085 RASSF7Q02833 373 aa12.82□□□□□ -0.36
ZNF880-201ENST00000344085 POLR3GLQ9BT43 218 aa12.82□□□□□ -0.36
ZNF880-201ENST00000344085 MYH14Q7Z406 1995 aaKnown RBP12.81□□□□□ -0.36
ZNF880-201ENST00000344085 NFATC2IPQ8NCF5 419 aa12.81□□□□□ -0.36
ZNF880-201ENST00000344085 TJP1Q07157 1748 aa12.8□□□□□ -0.36
ZNF880-201ENST00000344085 GLTPD2A6NH11 291 aa12.8□□□□□ -0.36
ZNF880-201ENST00000344085 TM4SF1P30408 202 aa12.8□□□□□ -0.36
ZNF880-201ENST00000344085 USPL1Q5W0Q7 1092 aa12.79□□□□□ -0.36
ZNF880-201ENST00000344085 INTS5Q6P9B9 1019 aaKnown RBP12.79□□□□□ -0.36
ZNF880-201ENST00000344085 SBF1O95248 1867 aa12.78□□□□□ -0.36
ZNF880-201ENST00000344085 TTLL6Q8N841 843 aa12.78□□□□□ -0.36
ZNF880-201ENST00000344085 PCNTO95613 3336 aa12.78□□□□□ -0.36
ZNF880-201ENST00000344085 TIAM2Q8IVF5 1701 aa12.77□□□□□ -0.36
ZNF880-201ENST00000344085 AEBP1Q8IUX7 1158 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms