RNA–Protein interactions for RNA: ENST00000343420.6

CD55-202, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 5

Gene CD55, Length 978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-202ENST00000343420 CABP4P57796 275 aa22.86■■□□□ 1.25
CD55-202ENST00000343420 MAP3K5Q99683 1374 aa22.86■■□□□ 1.25
CD55-202ENST00000343420 SCN11AQ9UI33 1791 aa22.86■■□□□ 1.25
CD55-202ENST00000343420 HMOX1P09601 288 aa22.85■■□□□ 1.25
CD55-202ENST00000343420 ATP6V1AP38606 617 aa22.85■■□□□ 1.25
CD55-202ENST00000343420 ZNF831Q5JPB2 1677 aa22.84■■□□□ 1.25
CD55-202ENST00000343420 AKAP4Q5JQC9 854 aa22.84■■□□□ 1.25
CD55-202ENST00000343420 LINC00116Q8NCU8 138 aa22.84■■□□□ 1.25
CD55-202ENST00000343420 COL3A1P02461 1466 aaPredicted RBP22.84■■□□□ 1.25
CD55-202ENST00000343420 VIRMAQ69YN4 1812 aaKnown RBP22.83■■□□□ 1.25
CD55-202ENST00000343420 ITPK1Q13572 414 aa22.83■■□□□ 1.25
CD55-202ENST00000343420 SSFA2P28290 1259 aa22.8■■□□□ 1.24
CD55-202ENST00000343420 AMIGO3Q86WK7 504 aa22.8■■□□□ 1.24
CD55-202ENST00000343420 NFATC2IPQ8NCF5 419 aa22.8■■□□□ 1.24
CD55-202ENST00000343420 RBM42Q9BTD8 480 aaKnown RBP22.8■■□□□ 1.24
CD55-202ENST00000343420 UTRNP46939 3433 aa22.8■■□□□ 1.24
CD55-202ENST00000343420 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.79■■□□□ 1.24
CD55-202ENST00000343420 PHF14O94880 888 aa22.79■■□□□ 1.24
CD55-202ENST00000343420 MSL1Q68DK7 614 aa22.79■■□□□ 1.24
CD55-202ENST00000343420 COL5A3P25940 1745 aaPredicted RBP22.78■■□□□ 1.24
CD55-202ENST00000343420 SLC4A9Q96Q91 983 aa22.78■■□□□ 1.24
CD55-202ENST00000343420 U2SURPO15042 1029 aaKnown RBP22.77■■□□□ 1.24
CD55-202ENST00000343420 GNPATO15228 680 aa22.77■■□□□ 1.24
CD55-202ENST00000343420 MTHFSDQ2M296 383 aaKnown RBP22.77■■□□□ 1.24
CD55-202ENST00000343420 KLHL34Q8N239 644 aa22.77■■□□□ 1.24
CD55-202ENST00000343420 SMIM5Q71RC9 77 aa22.76■■□□□ 1.23
CD55-202ENST00000343420 CFAP53Q96M91 514 aa22.76■■□□□ 1.23
CD55-202ENST00000343420 RNMTO43148 476 aaKnown RBP22.75■■□□□ 1.23
CD55-202ENST00000343420 SLC52A2Q9HAB3 445 aa22.75■■□□□ 1.23
CD55-202ENST00000343420 LGR6Q9HBX8 967 aa22.75■■□□□ 1.23
CD55-202ENST00000343420 ADAMTS7Q9UKP4 1686 aa22.74■■□□□ 1.23
CD55-202ENST00000343420 MYH14Q7Z406 1995 aaKnown RBP22.74■■□□□ 1.23
CD55-202ENST00000343420 MRC1P22897 1456 aa22.74■■□□□ 1.23
CD55-202ENST00000343420 YY1P25490 414 aa22.74■■□□□ 1.23
CD55-202ENST00000343420 PPP2R1AP30153 589 aa22.74■■□□□ 1.23
CD55-202ENST00000343420 RC3H1Q5TC82 1133 aaKnown RBP22.74■■□□□ 1.23
CD55-202ENST00000343420 PTCD1O75127 700 aaKnown RBP22.73■■□□□ 1.23
CD55-202ENST00000343420 RTCBQ9Y3I0 505 aaKnown RBP22.72■■□□□ 1.23
CD55-202ENST00000343420 CNTNAP4Q9C0A0 1308 aa22.72■■□□□ 1.23
CD55-202ENST00000343420 CHD4Q14839 1912 aa22.72■■□□□ 1.23
CD55-202ENST00000343420 CICQ96RK0 1608 aaPredicted RBP22.71■■□□□ 1.23
CD55-202ENST00000343420 TRAPPC3LQ5T215 181 aa22.7■■□□□ 1.22
CD55-202ENST00000343420 NLGN2Q8NFZ4 835 aa22.7■■□□□ 1.22
CD55-202ENST00000343420 GAS2L2Q8NHY3 880 aa22.7■■□□□ 1.22
CD55-202ENST00000343420 NUDCQ9Y266 331 aa22.7■■□□□ 1.22
CD55-202ENST00000343420 TJP1Q07157 1748 aa22.7■■□□□ 1.22
CD55-202ENST00000343420 ADRA2BP18089 450 aa22.69■■□□□ 1.22
CD55-202ENST00000343420 RPS6KA4O75676 772 aa22.68■■□□□ 1.22
CD55-202ENST00000343420 GPR162Q16538 588 aa22.68■■□□□ 1.22
CD55-202ENST00000343420 CD2APQ9Y5K6 639 aa22.68■■□□□ 1.22
CD55-202ENST00000343420 GNAT3A8MTJ3 354 aa22.66■■□□□ 1.22
CD55-202ENST00000343420 RSPH6AQ9H0K4 717 aa22.66■■□□□ 1.22
CD55-202ENST00000343420 PRKAR2BP31323 418 aa22.65■■□□□ 1.22
CD55-202ENST00000343420 CRKLP46109 303 aaKnown RBP22.65■■□□□ 1.22
CD55-202ENST00000343420 SLC39A6Q13433 755 aa22.65■■□□□ 1.22
CD55-202ENST00000343420 ARHGEF1Q92888 912 aaKnown RBP22.65■■□□□ 1.22
CD55-202ENST00000343420 U2AF1L5P0DN76 240 aaPredicted RBP22.64■■□□□ 1.21
CD55-202ENST00000343420 U2AF1Q01081 240 aaKnown RBP eCLIP22.64■■□□□ 1.21
CD55-202ENST00000343420 C4AP0C0L4 1744 aa22.64■■□□□ 1.21
CD55-202ENST00000343420 UBR2Q8IWV8 1755 aa22.63■■□□□ 1.21
CD55-202ENST00000343420 KCPQ6ZWJ8 1503 aa22.63■■□□□ 1.21
CD55-202ENST00000343420 RFC4P35249 363 aa22.63■■□□□ 1.21
CD55-202ENST00000343420 PELP1Q8IZL8 1130 aaKnown RBP22.63■■□□□ 1.21
CD55-202ENST00000343420 IL17REQ8NFR9 667 aa22.63■■□□□ 1.21
CD55-202ENST00000343420 PHACTR3Q96KR7 559 aa22.63■■□□□ 1.21
CD55-202ENST00000343420 SIPA1L3O60292 1781 aaPredicted RBP22.63■■□□□ 1.21
CD55-202ENST00000343420 GOLGB1Q14789 3259 aaKnown RBP22.62■■□□□ 1.21
CD55-202ENST00000343420 DNAJC10Q8IXB1 793 aa22.62■■□□□ 1.21
CD55-202ENST00000343420 NLGN1Q8N2Q7 840 aa22.62■■□□□ 1.21
CD55-202ENST00000343420 FCHSD2O94868 740 aa22.61■■□□□ 1.21
CD55-202ENST00000343420 TEFQ10587 303 aa22.61■■□□□ 1.21
CD55-202ENST00000343420 MMP10P09238 476 aa22.6■■□□□ 1.21
CD55-202ENST00000343420 GYS1P13807 737 aa22.6■■□□□ 1.21
CD55-202ENST00000343420 INTS5Q6P9B9 1019 aaKnown RBP22.6■■□□□ 1.21
CD55-202ENST00000343420 VSIG10Q8N0Z9 540 aa22.6■■□□□ 1.21
CD55-202ENST00000343420 TTC5Q8N0Z6 440 aa22.59■■□□□ 1.21
CD55-202ENST00000343420 CCDC87Q9NVE4 849 aa22.59■■□□□ 1.21
CD55-202ENST00000343420 CEMIPQ8WUJ3 1361 aa22.59■■□□□ 1.21
CD55-202ENST00000343420 CYP19A1P11511 503 aaPredicted RBP22.58■■□□□ 1.21
CD55-202ENST00000343420 KIF13BQ9NQT8 1826 aa22.57■■□□□ 1.2
CD55-202ENST00000343420 GRIN3BO60391 1043 aa22.57■■□□□ 1.2
CD55-202ENST00000343420 YBX3P16989 372 aaKnown RBP eCLIP22.56■■□□□ 1.22e-8■■□□□ 11.5
CD55-202ENST00000343420 ZNF790Q6PG37 636 aa22.56■■□□□ 1.2
CD55-202ENST00000343420 USP42Q9H9J4 1324 aaKnown RBP22.56■■□□□ 1.2
CD55-202ENST00000343420 SOS1Q07889 1333 aaPredicted RBP22.55■■□□□ 1.2
CD55-202ENST00000343420 SRP68Q9UHB9 627 aaKnown RBP22.54■■□□□ 1.2
CD55-202ENST00000343420 RTF1Q92541 710 aaKnown RBP22.53■■□□□ 1.2
CD55-202ENST00000343420 ZNF496Q96IT1 587 aaPredicted RBP22.53■■□□□ 1.2
CD55-202ENST00000343420 PARP3Q9Y6F1 533 aa22.53■■□□□ 1.2
CD55-202ENST00000343420 STARD3NLO95772 234 aa22.52■■□□□ 1.2
CD55-202ENST00000343420 DDX10Q13206 875 aaKnown RBP22.52■■□□□ 1.2
CD55-202ENST00000343420 RALBP1Q15311 655 aa22.52■■□□□ 1.2
CD55-202ENST00000343420 ZBTB1Q9Y2K1 713 aa22.52■■□□□ 1.2
CD55-202ENST00000343420 HEG1Q9ULI3 1381 aa22.51■■□□□ 1.19
CD55-202ENST00000343420 BTBD11A6QL63 1104 aa22.51■■□□□ 1.19
CD55-202ENST00000343420 HTATSF1O43719 755 aaKnown RBP22.51■■□□□ 1.19
CD55-202ENST00000343420 ZPR1O75312 459 aa22.51■■□□□ 1.19
CD55-202ENST00000343420 FKBP8Q14318 412 aa22.51■■□□□ 1.19
CD55-202ENST00000343420 TEX13AQ9BXU3 409 aaPredicted RBP22.51■■□□□ 1.19
CD55-202ENST00000343420 COL15A1P39059 1388 aa22.5■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms