RNA–Protein interactions for RNA: ENST00000342887.1

CFAP54-201, Transcript of cilia and flagella associated protein 54, humanhuman

TSL 2

Gene CFAP54, Length 3,686 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54-201ENST00000342887 LRP10Q7Z4F1 713 aa10.25□□□□□ -0.77
CFAP54-201ENST00000342887 COL5A3P25940 1745 aaPredicted RBP10.25□□□□□ -0.77
CFAP54-201ENST00000342887 CD2BP2O95400 341 aaKnown RBP10.25□□□□□ -0.77
CFAP54-201ENST00000342887 HOXB7P09629 217 aa10.25□□□□□ -0.77
CFAP54-201ENST00000342887 RAB3GAP1Q15042 981 aa10.25□□□□□ -0.77
CFAP54-201ENST00000342887 CIZ1Q9ULV3 898 aaPredicted RBP10.25□□□□□ -0.77
CFAP54-201ENST00000342887 C1orf167Q5SNV9 1468 aa10.24□□□□□ -0.77
CFAP54-201ENST00000342887 RRS1Q15050 365 aaKnown RBP10.24□□□□□ -0.77
CFAP54-201ENST00000342887 MTHFSDQ2M296 383 aaKnown RBP10.24□□□□□ -0.77
CFAP54-201ENST00000342887 TNS2Q63HR2 1409 aa10.24□□□□□ -0.77
CFAP54-201ENST00000342887 TTC22Q5TAA0 569 aa10.24□□□□□ -0.77
CFAP54-201ENST00000342887 KCNB2Q92953 911 aa10.24□□□□□ -0.77
CFAP54-201ENST00000342887 API5Q9BZZ5 524 aaKnown RBP10.24□□□□□ -0.77
CFAP54-201ENST00000342887 KDM6AO15550 1401 aaPredicted RBP10.24□□□□□ -0.77
CFAP54-201ENST00000342887 MYH3P11055 1940 aa10.23□□□□□ -0.77
CFAP54-201ENST00000342887 HSP90AB2PQ58FF8 381 aa10.23□□□□□ -0.77
CFAP54-201ENST00000342887 EYA1Q99502 592 aa10.23□□□□□ -0.77
CFAP54-201ENST00000342887 AMOTL2Q9Y2J4 779 aa10.23□□□□□ -0.77
CFAP54-201ENST00000342887 SAFB2Q14151 953 aaKnown RBP eCLIP10.23□□□□□ -0.77
CFAP54-201ENST00000342887 RPAP2Q8IXW5 612 aaPredicted RBP10.23□□□□□ -0.77
CFAP54-201ENST00000342887 THUMPD2Q9BTF0 503 aaKnown RBP10.23□□□□□ -0.77
CFAP54-201ENST00000342887 C4AP0C0L4 1744 aa10.23□□□□□ -0.77
CFAP54-201ENST00000342887 C4BP0C0L5 1744 aa10.23□□□□□ -0.77
CFAP54-201ENST00000342887 FRAT2O75474 233 aaPredicted RBP10.23□□□□□ -0.77
CFAP54-201ENST00000342887 MTX1Q13505 466 aa10.23□□□□□ -0.77
CFAP54-201ENST00000342887 CHMP4BQ9H444 224 aaKnown RBP10.22□□□□□ -0.77
CFAP54-201ENST00000342887 TBC1D9Q6ZT07 1266 aa10.22□□□□□ -0.77
CFAP54-201ENST00000342887 C22orf23Q9BZE7 217 aa10.22□□□□□ -0.77
CFAP54-201ENST00000342887 ADCY9O60503 1353 aa10.22□□□□□ -0.77
CFAP54-201ENST00000342887 FRAT1Q92837 279 aaPredicted RBP10.21□□□□□ -0.77
CFAP54-201ENST00000342887 USP26Q9BXU7 913 aa10.21□□□□□ -0.77
CFAP54-201ENST00000342887 DLEC1Q9Y238 1755 aa10.21□□□□□ -0.77
CFAP54-201ENST00000342887 CPDO75976 1380 aa10.21□□□□□ -0.78
CFAP54-201ENST00000342887 NEFMP07197 916 aa10.2□□□□□ -0.78
CFAP54-201ENST00000342887 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.2□□□□□ -0.78
CFAP54-201ENST00000342887 IL17REQ8NFR9 667 aa10.2□□□□□ -0.78
CFAP54-201ENST00000342887 HMOX1P09601 288 aa10.2□□□□□ -0.78
CFAP54-201ENST00000342887 RGS3P49796 1198 aa10.2□□□□□ -0.78
CFAP54-201ENST00000342887 KLHL34Q8N239 644 aa10.2□□□□□ -0.78
CFAP54-201ENST00000342887 AKAP11Q9UKA4 1901 aa10.2□□□□□ -0.78
CFAP54-201ENST00000342887 U2SURPO15042 1029 aaKnown RBP10.19□□□□□ -0.78
CFAP54-201ENST00000342887 VSIG10Q8N0Z9 540 aa10.19□□□□□ -0.78
CFAP54-201ENST00000342887 SLC4A3P48751 1232 aa10.19□□□□□ -0.78
CFAP54-201ENST00000342887 NEUROD2Q15784 382 aa10.19□□□□□ -0.78
CFAP54-201ENST00000342887 IP6K1Q92551 441 aa10.19□□□□□ -0.78
CFAP54-201ENST00000342887 TCHHQ07283 1943 aa10.18□□□□□ -0.78
CFAP54-201ENST00000342887 MEGF6O75095 1541 aa10.18□□□□□ -0.78
CFAP54-201ENST00000342887 KCNA6P17658 529 aa10.18□□□□□ -0.78
CFAP54-201ENST00000342887 ITPRIPQ8IWB1 547 aa10.18□□□□□ -0.78
CFAP54-201ENST00000342887 SSH3Q8TE77 659 aa10.18□□□□□ -0.78
CFAP54-201ENST00000342887 CUL4AQ13619 759 aa10.17□□□□□ -0.78
CFAP54-201ENST00000342887 KRT24Q2M2I5 525 aa10.17□□□□□ -0.78
CFAP54-201ENST00000342887 SULT6B1Q6IMI4 303 aa10.17□□□□□ -0.78
CFAP54-201ENST00000342887 THEMISQ8N1K5 641 aaPredicted RBP10.17□□□□□ -0.78
CFAP54-201ENST00000342887 ISY1Q9ULR0 285 aaKnown RBP10.17□□□□□ -0.78
CFAP54-201ENST00000342887 TIAM2Q8IVF5 1701 aa10.17□□□□□ -0.78
CFAP54-201ENST00000342887 MCM4P33991 863 aa10.17□□□□□ -0.78
CFAP54-201ENST00000342887 G2E3Q7L622 706 aa10.16□□□□□ -0.78
CFAP54-201ENST00000342887 FTSJ3Q8IY81 847 aaKnown RBP10.16□□□□□ -0.78
CFAP54-201ENST00000342887 ZDHHC9Q9Y397 364 aa10.16□□□□□ -0.78
CFAP54-201ENST00000342887 DCTN1Q14203 1278 aa10.16□□□□□ -0.78
CFAP54-201ENST00000342887 FOXO3O43524 673 aa10.15□□□□□ -0.78
CFAP54-201ENST00000342887 LAS1LQ9Y4W2 734 aaKnown RBP10.15□□□□□ -0.78
CFAP54-201ENST00000342887 AHDC1Q5TGY3 1603 aaPredicted RBP10.15□□□□□ -0.78
CFAP54-201ENST00000342887 ARHGEF25Q86VW2 580 aa10.15□□□□□ -0.78
CFAP54-201ENST00000342887 COL14A1Q05707 1796 aaKnown RBP10.15□□□□□ -0.78
CFAP54-201ENST00000342887 COL24A1Q17RW2 1714 aa10.15□□□□□ -0.78
CFAP54-201ENST00000342887 HAP1P54257 671 aaPredicted RBP10.15□□□□□ -0.78
CFAP54-201ENST00000342887 GAS2L2Q8NHY3 880 aa10.15□□□□□ -0.78
CFAP54-201ENST00000342887 CCT4P50991 539 aaKnown RBP10.14□□□□□ -0.79
CFAP54-201ENST00000342887 PDIA6Q15084 440 aa10.14□□□□□ -0.79
CFAP54-201ENST00000342887 PI4K2BQ8TCG2 481 aa10.14□□□□□ -0.79
CFAP54-201ENST00000342887 MEIS3Q99687 375 aa10.14□□□□□ -0.79
CFAP54-201ENST00000342887 CHMP5Q9NZZ3 219 aa10.14□□□□□ -0.79
CFAP54-201ENST00000342887 RPAP1Q9BWH6 1393 aaPredicted RBP10.14□□□□□ -0.79
CFAP54-201ENST00000342887 EIF4A1P60842 406 aaKnown RBP10.14□□□□□ -0.79
CFAP54-201ENST00000342887 RTL5Q5HYW3 569 aaPredicted RBP10.14□□□□□ -0.79
CFAP54-201ENST00000342887 ATP8B2P98198 1209 aa10.14□□□□□ -0.79
CFAP54-201ENST00000342887 MCM10Q7L590 875 aa10.14□□□□□ -0.79
CFAP54-201ENST00000342887 USP44Q9H0E7 712 aa10.14□□□□□ -0.79
CFAP54-201ENST00000342887 SLIT2O94813 1529 aa10.13□□□□□ -0.79
CFAP54-201ENST00000342887 CDC45O75419 566 aa10.13□□□□□ -0.79
CFAP54-201ENST00000342887 NUP98P52948 1817 aa10.13□□□□□ -0.79
CFAP54-201ENST00000342887 RFX7Q2KHR2 1363 aa10.13□□□□□ -0.79
CFAP54-201ENST00000342887 BECN1Q14457 450 aa10.13□□□□□ -0.79
CFAP54-201ENST00000342887 OTUD7AQ8TE49 926 aaPredicted RBP10.13□□□□□ -0.79
CFAP54-201ENST00000342887 CHD4Q14839 1912 aa10.13□□□□□ -0.79
CFAP54-201ENST00000342887 SDSP20132 328 aa10.12□□□□□ -0.79
CFAP54-201ENST00000342887 CEBPAP49715 358 aaPredicted RBP10.12□□□□□ -0.79
CFAP54-201ENST00000342887 BEND3Q5T5X7 828 aa10.12□□□□□ -0.79
CFAP54-201ENST00000342887 DISP2A7MBM2 1401 aa10.12□□□□□ -0.79
CFAP54-201ENST00000342887 A0A0U1RQG5 324 aaPredicted RBP10.12□□□□□ -0.79
CFAP54-201ENST00000342887 TNS3Q68CZ2 1445 aa10.12□□□□□ -0.79
CFAP54-201ENST00000342887 GNAT3A8MTJ3 354 aa10.11□□□□□ -0.79
CFAP54-201ENST00000342887 NPM2Q86SE8 214 aaKnown RBP10.11□□□□□ -0.79
CFAP54-201ENST00000342887 PDE1AP54750 535 aa10.11□□□□□ -0.79
CFAP54-201ENST00000342887 ANAPC15P60006 121 aa10.11□□□□□ -0.79
CFAP54-201ENST00000342887 KAZALD1Q96I82 304 aa10.11□□□□□ -0.79
CFAP54-201ENST00000342887 TTC14Q96N46 770 aa10.11□□□□□ -0.79
CFAP54-201ENST00000342887 SCN7AQ01118 1682 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms