RNA–Protein interactions for RNA: ENST00000342751.8

SDHC-201, Transcript of succinate dehydrogenase complex subunit C, humanhuman

TSL 1 (best) BASIC

Gene SDHC, Length 1,127 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHC-201ENST00000342751 DCAF5Q96JK2 942 aa27.55■■■□□ 2
SDHC-201ENST00000342751 KDM6AO15550 1401 aaPredicted RBP27.55■■■□□ 2
SDHC-201ENST00000342751 HMGB2P26583 209 aaKnown RBP27.54■■■□□ 2
SDHC-201ENST00000342751 ITPK1Q13572 414 aa27.54■■■□□ 2
SDHC-201ENST00000342751 CHD4Q14839 1912 aa27.53■■■□□ 2
SDHC-201ENST00000342751 PER1O15534 1290 aaPredicted RBP27.53■■■□□ 2
SDHC-201ENST00000342751 CABP4P57796 275 aa27.53■■■□□ 2
SDHC-201ENST00000342751 FLAD1Q8NFF5 587 aa27.53■■■□□ 2
SDHC-201ENST00000342751 RBM42Q9BTD8 480 aaKnown RBP27.53■■■□□ 2
SDHC-201ENST00000342751 ERVV-2B6SEH9 535 aa27.52■■■□□ 2
SDHC-201ENST00000342751 HMOX1P09601 288 aa27.52■■■□□ 2
SDHC-201ENST00000342751 NLGN2Q8NFZ4 835 aa27.52■■■□□ 2
SDHC-201ENST00000342751 UBR3Q6ZT12 1888 aa27.51■■□□□ 1.99
SDHC-201ENST00000342751 GNPATO15228 680 aa27.51■■□□□ 1.99
SDHC-201ENST00000342751 GPR162Q16538 588 aa27.51■■□□□ 1.99
SDHC-201ENST00000342751 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP27.5■■□□□ 1.99
SDHC-201ENST00000342751 KDRP35968 1356 aa27.49■■□□□ 1.99
SDHC-201ENST00000342751 UTRNP46939 3433 aa27.48■■□□□ 1.99
SDHC-201ENST00000342751 DIAPH1O60610 1272 aaKnown RBP27.46■■□□□ 1.99
SDHC-201ENST00000342751 SSFA2P28290 1259 aa27.45■■□□□ 1.98
SDHC-201ENST00000342751 SLC4A9Q96Q91 983 aa27.44■■□□□ 1.98
SDHC-201ENST00000342751 PTCD1O75127 700 aaKnown RBP27.43■■□□□ 1.98
SDHC-201ENST00000342751 ZNF784Q8NCA9 323 aaPredicted RBP27.43■■□□□ 1.98
SDHC-201ENST00000342751 NFATC2IPQ8NCF5 419 aa27.43■■□□□ 1.98
SDHC-201ENST00000342751 U2SURPO15042 1029 aaKnown RBP27.41■■□□□ 1.98
SDHC-201ENST00000342751 AKAP4Q5JQC9 854 aa27.4■■□□□ 1.98
SDHC-201ENST00000342751 SCN11AQ9UI33 1791 aa27.4■■□□□ 1.98
SDHC-201ENST00000342751 NPC1L1Q9UHC9 1359 aa27.39■■□□□ 1.98
SDHC-201ENST00000342751 RTCBQ9Y3I0 505 aaKnown RBP27.39■■□□□ 1.98
SDHC-201ENST00000342751 COL3A1P02461 1466 aaPredicted RBP27.38■■□□□ 1.97
SDHC-201ENST00000342751 COL5A3P25940 1745 aaPredicted RBP27.37■■□□□ 1.97
SDHC-201ENST00000342751 LGR6Q9HBX8 967 aa27.37■■□□□ 1.97
SDHC-201ENST00000342751 MTHFSDQ2M296 383 aaKnown RBP27.36■■□□□ 1.97
SDHC-201ENST00000342751 WWC3Q9ULE0 1092 aa27.36■■□□□ 1.97
SDHC-201ENST00000342751 TRAPPC3LQ5T215 181 aa27.35■■□□□ 1.97
SDHC-201ENST00000342751 ZNF831Q5JPB2 1677 aa27.34■■□□□ 1.97
SDHC-201ENST00000342751 RNMTO43148 476 aaKnown RBP27.34■■□□□ 1.97
SDHC-201ENST00000342751 YBX3P16989 372 aaKnown RBP eCLIP27.34■■□□□ 1.97
SDHC-201ENST00000342751 SLC52A2Q9HAB3 445 aa27.34■■□□□ 1.97
SDHC-201ENST00000342751 CD2APQ9Y5K6 639 aa27.34■■□□□ 1.97
SDHC-201ENST00000342751 CNTNAP4Q9C0A0 1308 aa27.34■■□□□ 1.97
SDHC-201ENST00000342751 VIRMAQ69YN4 1812 aaKnown RBP27.32■■□□□ 1.96
SDHC-201ENST00000342751 TJP1Q07157 1748 aa27.31■■□□□ 1.96
SDHC-201ENST00000342751 MMP10P09238 476 aa27.31■■□□□ 1.96
SDHC-201ENST00000342751 SLC39A6Q13433 755 aa27.31■■□□□ 1.96
SDHC-201ENST00000342751 ARHGEF1Q92888 912 aaKnown RBP27.31■■□□□ 1.96
SDHC-201ENST00000342751 RFC4P35249 363 aa27.3■■□□□ 1.96
SDHC-201ENST00000342751 CRKLP46109 303 aaKnown RBP27.3■■□□□ 1.96
SDHC-201ENST00000342751 RC3H1Q5TC82 1133 aaKnown RBP27.3■■□□□ 1.96
SDHC-201ENST00000342751 CFAP53Q96M91 514 aa27.3■■□□□ 1.96
SDHC-201ENST00000342751 GRIN3BO60391 1043 aa27.29■■□□□ 1.96
SDHC-201ENST00000342751 RPS6KA4O75676 772 aa27.29■■□□□ 1.96
SDHC-201ENST00000342751 MRC1P22897 1456 aa27.29■■□□□ 1.96
SDHC-201ENST00000342751 MYH14Q7Z406 1995 aaKnown RBP27.29■■□□□ 1.96
SDHC-201ENST00000342751 DNAJC10Q8IXB1 793 aa27.27■■□□□ 1.96
SDHC-201ENST00000342751 CICQ96RK0 1608 aaPredicted RBP27.27■■□□□ 1.96
SDHC-201ENST00000342751 ADRA2BP18089 450 aa27.26■■□□□ 1.95
SDHC-201ENST00000342751 GOLGB1Q14789 3259 aaKnown RBP27.26■■□□□ 1.95
SDHC-201ENST00000342751 C4AP0C0L4 1744 aa27.26■■□□□ 1.95
SDHC-201ENST00000342751 SRP68Q9UHB9 627 aaKnown RBP27.24■■□□□ 1.95
SDHC-201ENST00000342751 GYS1P13807 737 aa27.23■■□□□ 1.95
SDHC-201ENST00000342751 PPP2R1AP30153 589 aa27.23■■□□□ 1.95
SDHC-201ENST00000342751 NLGN1Q8N2Q7 840 aa27.23■■□□□ 1.95
SDHC-201ENST00000342751 GAS2L2Q8NHY3 880 aa27.23■■□□□ 1.95
SDHC-201ENST00000342751 KCPQ6ZWJ8 1503 aa27.22■■□□□ 1.95
SDHC-201ENST00000342751 PRKAR2BP31323 418 aa27.22■■□□□ 1.95
SDHC-201ENST00000342751 ADAMTS7Q9UKP4 1686 aa27.21■■□□□ 1.95
SDHC-201ENST00000342751 CCDC87Q9NVE4 849 aa27.21■■□□□ 1.95
SDHC-201ENST00000342751 GNAT3A8MTJ3 354 aa27.2■■□□□ 1.94
SDHC-201ENST00000342751 INTS5Q6P9B9 1019 aaKnown RBP27.2■■□□□ 1.94
SDHC-201ENST00000342751 NUDCQ9Y266 331 aa27.2■■□□□ 1.94
SDHC-201ENST00000342751 PARP3Q9Y6F1 533 aa27.2■■□□□ 1.94
SDHC-201ENST00000342751 U2AF1L5P0DN76 240 aaPredicted RBP27.19■■□□□ 1.94
SDHC-201ENST00000342751 U2AF1Q01081 240 aaKnown RBP eCLIP27.19■■□□□ 1.94
SDHC-201ENST00000342751 TEFQ10587 303 aa27.19■■□□□ 1.94
SDHC-201ENST00000342751 TTC5Q8N0Z6 440 aa27.19■■□□□ 1.94
SDHC-201ENST00000342751 PHACTR3Q96KR7 559 aa27.18■■□□□ 1.94
SDHC-201ENST00000342751 RSPH6AQ9H0K4 717 aa27.18■■□□□ 1.94
SDHC-201ENST00000342751 USP42Q9H9J4 1324 aaKnown RBP27.16■■□□□ 1.94
SDHC-201ENST00000342751 CYP19A1P11511 503 aaPredicted RBP27.16■■□□□ 1.94
SDHC-201ENST00000342751 FKBP8Q14318 412 aa27.16■■□□□ 1.94
SDHC-201ENST00000342751 IL17REQ8NFR9 667 aa27.16■■□□□ 1.94
SDHC-201ENST00000342751 PXDNLA1KZ92 1463 aa27.15■■□□□ 1.94
SDHC-201ENST00000342751 C10orf71Q711Q0 1435 aa27.15■■□□□ 1.94
SDHC-201ENST00000342751 N4BP2Q86UW6 1770 aaPredicted RBP27.14■■□□□ 1.94
SDHC-201ENST00000342751 C1QTNF8P60827 252 aa27.14■■□□□ 1.94
SDHC-201ENST00000342751 ZBTB1Q9Y2K1 713 aa27.14■■□□□ 1.94
SDHC-201ENST00000342751 SOS1Q07889 1333 aaPredicted RBP27.14■■□□□ 1.93
SDHC-201ENST00000342751 KIF13BQ9NQT8 1826 aa27.13■■□□□ 1.93
SDHC-201ENST00000342751 UBR2Q8IWV8 1755 aa27.13■■□□□ 1.93
SDHC-201ENST00000342751 A0A0G2JLW4 131 aa27.13■■□□□ 1.93
SDHC-201ENST00000342751 ZPR1O75312 459 aa27.13■■□□□ 1.93
SDHC-201ENST00000342751 GIGYF1O75420 1035 aaPredicted RBP27.13■■□□□ 1.93
SDHC-201ENST00000342751 CANXP27824 592 aaKnown RBP27.12■■□□□ 1.93
SDHC-201ENST00000342751 USPL1Q5W0Q7 1092 aa27.12■■□□□ 1.93
SDHC-201ENST00000342751 COL15A1P39059 1388 aa27.11■■□□□ 1.93
SDHC-201ENST00000342751 DDR1Q08345 913 aa27.11■■□□□ 1.93
SDHC-201ENST00000342751 KIAA1551Q9HCM1 1747 aa27.1■■□□□ 1.93
SDHC-201ENST00000342751 ZNF496Q96IT1 587 aaPredicted RBP27.1■■□□□ 1.93
SDHC-201ENST00000342751 BCS1LQ9Y276 419 aa27.1■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms