RNA–Protein interactions for RNA: ENST00000342294.4

TRA2B-202, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best) BASIC

Gene TRA2B, Length 288 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-202ENST00000342294 A0A0G2JLW4 131 aa23.63■■□□□ 1.37
TRA2B-202ENST00000342294 ATG3Q9NT62 314 aa23.63■■□□□ 1.37
TRA2B-202ENST00000342294 C10orf71Q711Q0 1435 aa23.62■■□□□ 1.37
TRA2B-202ENST00000342294 TMF1P82094 1093 aa23.62■■□□□ 1.37
TRA2B-202ENST00000342294 NLGN1Q8N2Q7 840 aa23.62■■□□□ 1.37
TRA2B-202ENST00000342294 CARD14Q9BXL6 1004 aa23.61■■□□□ 1.37
TRA2B-202ENST00000342294 PHKG2P15735 406 aa23.6■■□□□ 1.37
TRA2B-202ENST00000342294 ARHGAP27Q6ZUM4 889 aa23.6■■□□□ 1.37
TRA2B-202ENST00000342294 EYA1Q99502 592 aa23.6■■□□□ 1.37
TRA2B-202ENST00000342294 WASHC2AQ641Q2 1341 aa23.59■■□□□ 1.37
TRA2B-202ENST00000342294 DPEP1P16444 411 aa23.59■■□□□ 1.37
TRA2B-202ENST00000342294 TRAPPC3LQ5T215 181 aa23.59■■□□□ 1.37
TRA2B-202ENST00000342294 IFNL2Q8IZJ0 200 aa23.59■■□□□ 1.37
TRA2B-202ENST00000342294 RBM46Q8TBY0 533 aaKnown RBP23.59■■□□□ 1.37
TRA2B-202ENST00000342294 SLC4A9Q96Q91 983 aa23.59■■□□□ 1.37
TRA2B-202ENST00000342294 KDRP35968 1356 aa23.59■■□□□ 1.37
TRA2B-202ENST00000342294 RTCBQ9Y3I0 505 aaKnown RBP23.58■■□□□ 1.37
TRA2B-202ENST00000342294 N4BP2Q86UW6 1770 aaPredicted RBP23.57■■□□□ 1.36
TRA2B-202ENST00000342294 KIF20BQ96Q89 1820 aa23.57■■□□□ 1.36
TRA2B-202ENST00000342294 KCNA3P22001 575 aa23.57■■□□□ 1.36
TRA2B-202ENST00000342294 FCHSD2O94868 740 aa23.56■■□□□ 1.36
TRA2B-202ENST00000342294 GYS1P13807 737 aa23.56■■□□□ 1.36
TRA2B-202ENST00000342294 ADRA2BP18089 450 aa23.56■■□□□ 1.36
TRA2B-202ENST00000342294 RC3H1Q5TC82 1133 aaKnown RBP23.56■■□□□ 1.36
TRA2B-202ENST00000342294 ARHGEF1Q92888 912 aaKnown RBP23.56■■□□□ 1.36
TRA2B-202ENST00000342294 CCDC87Q9NVE4 849 aa23.56■■□□□ 1.36
TRA2B-202ENST00000342294 PPM1GO15355 546 aaPredicted RBP23.55■■□□□ 1.36
TRA2B-202ENST00000342294 JMYQ8N9B5 988 aa23.55■■□□□ 1.36
TRA2B-202ENST00000342294 C9orf131Q5VYM1 1079 aa23.54■■□□□ 1.36
TRA2B-202ENST00000342294 KLRG1Q96E93 195 aa23.54■■□□□ 1.36
TRA2B-202ENST00000342294 CNTNAP4Q9C0A0 1308 aa23.53■■□□□ 1.36
TRA2B-202ENST00000342294 RPS6KA4O75676 772 aa23.52■■□□□ 1.36
TRA2B-202ENST00000342294 HTRA3P83110 453 aa23.52■■□□□ 1.36
TRA2B-202ENST00000342294 FSTL1Q12841 308 aa23.52■■□□□ 1.36
TRA2B-202ENST00000342294 CDCA8Q53HL2 280 aa23.52■■□□□ 1.36
TRA2B-202ENST00000342294 COL13A1Q5TAT6 717 aaPredicted RBP23.52■■□□□ 1.36
TRA2B-202ENST00000342294 C4AP0C0L4 1744 aa23.52■■□□□ 1.36
TRA2B-202ENST00000342294 WDR90Q96KV7 1748 aa23.52■■□□□ 1.36
TRA2B-202ENST00000342294 ANKRD26Q9UPS8 1709 aa23.52■■□□□ 1.36
TRA2B-202ENST00000342294 PLEKHG2Q9H7P9 1386 aa23.52■■□□□ 1.36
TRA2B-202ENST00000342294 PARP3Q9Y6F1 533 aa23.51■■□□□ 1.35
TRA2B-202ENST00000342294 ZNF831Q5JPB2 1677 aa23.51■■□□□ 1.35
TRA2B-202ENST00000342294 ERVV-2B6SEH9 535 aa23.5■■□□□ 1.35
TRA2B-202ENST00000342294 POLKQ9UBT6 870 aa23.5■■□□□ 1.35
TRA2B-202ENST00000342294 BRCA1P38398 1863 aaKnown RBP23.49■■□□□ 1.35
TRA2B-202ENST00000342294 RFC4P35249 363 aa23.49■■□□□ 1.35
TRA2B-202ENST00000342294 C16orf71Q8IYS4 520 aaPredicted RBP23.49■■□□□ 1.35
TRA2B-202ENST00000342294 DCAF5Q96JK2 942 aa23.49■■□□□ 1.35
TRA2B-202ENST00000342294 RBM42Q9BTD8 480 aaKnown RBP23.49■■□□□ 1.35
TRA2B-202ENST00000342294 PIM2Q9P1W9 311 aa23.48■■□□□ 1.35
TRA2B-202ENST00000342294 EIF4A2Q14240 407 aaKnown RBP23.46■■□□□ 1.35
TRA2B-202ENST00000342294 KCPQ6ZWJ8 1503 aa23.46■■□□□ 1.35
TRA2B-202ENST00000342294 KDM2BQ8NHM5 1336 aa23.46■■□□□ 1.35
TRA2B-202ENST00000342294 ARFGEF1Q9Y6D6 1849 aa23.45■■□□□ 1.34
TRA2B-202ENST00000342294 COL5A3P25940 1745 aaPredicted RBP23.45■■□□□ 1.34
TRA2B-202ENST00000342294 DALRD3Q5D0E6 543 aaKnown RBP23.44■■□□□ 1.34
TRA2B-202ENST00000342294 RNF181Q9P0P0 153 aa23.44■■□□□ 1.34
TRA2B-202ENST00000342294 HSP90AB1P08238 724 aaKnown RBP23.43■■□□□ 1.34
TRA2B-202ENST00000342294 RRAGCQ9HB90 399 aa23.43■■□□□ 1.34
TRA2B-202ENST00000342294 MYH14Q7Z406 1995 aaKnown RBP23.42■■□□□ 1.34
TRA2B-202ENST00000342294 DDR1Q08345 913 aa23.42■■□□□ 1.34
TRA2B-202ENST00000342294 KDM6AO15550 1401 aaPredicted RBP23.42■■□□□ 1.34
TRA2B-202ENST00000342294 FKBP8Q14318 412 aa23.41■■□□□ 1.34
TRA2B-202ENST00000342294 SRP68Q9UHB9 627 aaKnown RBP23.41■■□□□ 1.34
TRA2B-202ENST00000342294 USP42Q9H9J4 1324 aaKnown RBP23.4■■□□□ 1.34
TRA2B-202ENST00000342294 CRKLP46109 303 aaKnown RBP23.4■■□□□ 1.34
TRA2B-202ENST00000342294 CHRNA5P30532 468 aa23.39■■□□□ 1.33
TRA2B-202ENST00000342294 CABP4P57796 275 aa23.39■■□□□ 1.33
TRA2B-202ENST00000342294 PLEKHO1Q53GL0 409 aaPredicted RBP23.38■■□□□ 1.33
TRA2B-202ENST00000342294 SMC1BQ8NDV3 1235 aa23.38■■□□□ 1.33
TRA2B-202ENST00000342294 PTCD1O75127 700 aaKnown RBP23.37■■□□□ 1.33
TRA2B-202ENST00000342294 TM4SF1P30408 202 aa23.37■■□□□ 1.33
TRA2B-202ENST00000342294 TNS4Q8IZW8 715 aa23.37■■□□□ 1.33
TRA2B-202ENST00000342294 POLRMTO00411 1230 aaKnown RBP23.36■■□□□ 1.33
TRA2B-202ENST00000342294 PRELPP51888 382 aa23.36■■□□□ 1.33
TRA2B-202ENST00000342294 ZNF530Q6P9A1 599 aaPredicted RBP23.36■■□□□ 1.33
TRA2B-202ENST00000342294 CAPN15O75808 1086 aa23.35■■□□□ 1.33
TRA2B-202ENST00000342294 AMOTQ4VCS5 1084 aa23.35■■□□□ 1.33
TRA2B-202ENST00000342294 TNRC6CQ9HCJ0 1690 aaKnown RBP23.35■■□□□ 1.33
TRA2B-202ENST00000342294 ZC3H4Q9UPT8 1303 aaKnown RBP23.34■■□□□ 1.33
TRA2B-202ENST00000342294 INTS5Q6P9B9 1019 aaKnown RBP23.34■■□□□ 1.33
TRA2B-202ENST00000342294 SBF1O95248 1867 aa23.33■■□□□ 1.33
TRA2B-202ENST00000342294 TNNT2P45379 298 aaPredicted RBP23.33■■□□□ 1.33
TRA2B-202ENST00000342294 MTHFSP49914 203 aa23.33■■□□□ 1.33
TRA2B-202ENST00000342294 NFATC2IPQ8NCF5 419 aa23.33■■□□□ 1.33
TRA2B-202ENST00000342294 RASSF7Q02833 373 aa23.31■■□□□ 1.32
TRA2B-202ENST00000342294 ADAMTS7Q9UKP4 1686 aa23.31■■□□□ 1.32
TRA2B-202ENST00000342294 GLTPD2A6NH11 291 aa23.29■■□□□ 1.32
TRA2B-202ENST00000342294 VEGFAP15692 232 aaPredicted RBP23.29■■□□□ 1.32
TRA2B-202ENST00000342294 TJP1Q07157 1748 aa23.28■■□□□ 1.32
TRA2B-202ENST00000342294 LMNB1P20700 586 aa23.28■■□□□ 1.32
TRA2B-202ENST00000342294 C1orf141Q5JVX7 400 aa23.28■■□□□ 1.32
TRA2B-202ENST00000342294 USPL1Q5W0Q7 1092 aa23.28■■□□□ 1.32
TRA2B-202ENST00000342294 AEBP1Q8IUX7 1158 aa23.28■■□□□ 1.32
TRA2B-202ENST00000342294 HSPA1AP0DMV8 641 aaKnown RBP23.27■■□□□ 1.32
TRA2B-202ENST00000342294 HSPA1BP0DMV9 641 aaKnown RBP23.27■■□□□ 1.32
TRA2B-202ENST00000342294 ZPR1O75312 459 aa23.26■■□□□ 1.31
TRA2B-202ENST00000342294 SOS1Q07889 1333 aaPredicted RBP23.26■■□□□ 1.31
TRA2B-202ENST00000342294 NFIXQ14938 502 aa23.25■■□□□ 1.31
TRA2B-202ENST00000342294 DNAJC10Q8IXB1 793 aa23.25■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms