RNA–Protein interactions for RNA: ENST00000342075.8

PMS1-201, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2

Gene PMS1, Length 3,012 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-201ENST00000342075 RRP1P56182 461 aaKnown RBP17.96■□□□□ 0.47
PMS1-201ENST00000342075 BTBD11A6QL63 1104 aa17.96■□□□□ 0.47
PMS1-201ENST00000342075 NECTIN2Q92692 538 aa17.96■□□□□ 0.47
PMS1-201ENST00000342075 TWISTNBQ3B726 338 aaPredicted RBP17.96■□□□□ 0.46
PMS1-201ENST00000342075 FBXO41Q8TF61 875 aa17.96■□□□□ 0.46
PMS1-201ENST00000342075 DCAF5Q96JK2 942 aa17.96■□□□□ 0.46
PMS1-201ENST00000342075 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.95■□□□□ 0.46
PMS1-201ENST00000342075 EXOC5O00471 708 aa17.95■□□□□ 0.46
PMS1-201ENST00000342075 SSH1Q8WYL5 1049 aa17.95■□□□□ 0.46
PMS1-201ENST00000342075 SLC52A2Q9HAB3 445 aa17.95■□□□□ 0.46
PMS1-201ENST00000342075 KDM3BQ7LBC6 1761 aa17.95■□□□□ 0.46
PMS1-201ENST00000342075 PRAMEF22A3QJZ6 481 aa17.95■□□□□ 0.46
PMS1-201ENST00000342075 VAMP4O75379 141 aa17.95■□□□□ 0.46
PMS1-201ENST00000342075 DDB1Q16531 1140 aa17.95■□□□□ 0.46
PMS1-201ENST00000342075 TNS2Q63HR2 1409 aa17.94■□□□□ 0.46
PMS1-201ENST00000342075 RNF123Q5XPI4 1314 aa17.94■□□□□ 0.46
PMS1-201ENST00000342075 FRAT1Q92837 279 aaPredicted RBP17.94■□□□□ 0.46
PMS1-201ENST00000342075 MARCH10Q8NA82 808 aaPredicted RBP17.93■□□□□ 0.46
PMS1-201ENST00000342075 GJD4Q96KN9 370 aaPredicted RBP17.93■□□□□ 0.46
PMS1-201ENST00000342075 THRAP3Q9Y2W1 955 aaKnown RBP17.93■□□□□ 0.46
PMS1-201ENST00000342075 CABP4P57796 275 aa17.92■□□□□ 0.46
PMS1-201ENST00000342075 BARGINQ6ZT62 677 aa17.92■□□□□ 0.46
PMS1-201ENST00000342075 SMC4Q9NTJ3 1288 aa17.92■□□□□ 0.46
PMS1-201ENST00000342075 ACSBG1Q96GR2 724 aa17.91■□□□□ 0.46
PMS1-201ENST00000342075 QTRT2Q9H974 415 aaKnown RBP17.91■□□□□ 0.46
PMS1-201ENST00000342075 SYTL4Q96C24 671 aaPredicted RBP17.91■□□□□ 0.46
PMS1-201ENST00000342075 ATRNO75882 1429 aa17.9■□□□□ 0.46
PMS1-201ENST00000342075 EIF4A1P60842 406 aaKnown RBP17.9■□□□□ 0.46
PMS1-201ENST00000342075 NKX1-1Q15270 411 aaPredicted RBP17.9■□□□□ 0.46
PMS1-201ENST00000342075 ITGB4P16144 1822 aa17.9■□□□□ 0.46
PMS1-201ENST00000342075 MRC1P22897 1456 aa17.9■□□□□ 0.46
PMS1-201ENST00000342075 DOT1LQ8TEK3 1739 aa17.89■□□□□ 0.46
PMS1-201ENST00000342075 PLEKHG2Q9H7P9 1386 aa17.89■□□□□ 0.45
PMS1-201ENST00000342075 NEFLP07196 543 aa17.89■□□□□ 0.45
PMS1-201ENST00000342075 HSP90AB1P08238 724 aaKnown RBP17.89■□□□□ 0.45
PMS1-201ENST00000342075 CLUAP1Q96AJ1 413 aa17.89■□□□□ 0.45
PMS1-201ENST00000342075 TRPC5Q9UL62 973 aaPredicted RBP17.88■□□□□ 0.45
PMS1-201ENST00000342075 ZNF790Q6PG37 636 aa17.88■□□□□ 0.45
PMS1-201ENST00000342075 PTF1AQ7RTS3 328 aa17.88■□□□□ 0.45
PMS1-201ENST00000342075 EIF2S2P20042 333 aaKnown RBP17.87■□□□□ 0.45
PMS1-201ENST00000342075 PIGBQ92521 554 aa17.87■□□□□ 0.45
PMS1-201ENST00000342075 ZNF496Q96IT1 587 aaPredicted RBP17.87■□□□□ 0.45
PMS1-201ENST00000342075 THSD7AQ9UPZ6 1657 aa17.87■□□□□ 0.45
PMS1-201ENST00000342075 C5P01031 1676 aa17.86■□□□□ 0.45
PMS1-201ENST00000342075 PRIM1P49642 420 aaKnown RBP17.86■□□□□ 0.45
PMS1-201ENST00000342075 PANK1Q8TE04 598 aa17.86■□□□□ 0.45
PMS1-201ENST00000342075 CDCA7Q9BWT1 371 aaPredicted RBP17.86■□□□□ 0.45
PMS1-201ENST00000342075 NOB1Q9ULX3 412 aaKnown RBP17.86■□□□□ 0.45
PMS1-201ENST00000342075 KCNQ2O43526 872 aa17.86■□□□□ 0.45
PMS1-201ENST00000342075 ANXA1P04083 346 aa17.86■□□□□ 0.45
PMS1-201ENST00000342075 RLBP1P12271 317 aa17.86■□□□□ 0.45
PMS1-201ENST00000342075 CANXP27824 592 aaKnown RBP17.86■□□□□ 0.45
PMS1-201ENST00000342075 ASAP1Q9ULH1 1129 aa17.86■□□□□ 0.45
PMS1-201ENST00000342075 PTCD1O75127 700 aaKnown RBP17.85■□□□□ 0.45
PMS1-201ENST00000342075 PIP4K2AP48426 406 aaPredicted RBP17.85■□□□□ 0.45
PMS1-201ENST00000342075 EXOC6Q8TAG9 804 aa17.85■□□□□ 0.45
PMS1-201ENST00000342075 TMOD3Q9NYL9 352 aa17.85■□□□□ 0.45
PMS1-201ENST00000342075 ERVV-2B6SEH9 535 aa17.84■□□□□ 0.45
PMS1-201ENST00000342075 SEPT12Q8IYM1 358 aa17.84■□□□□ 0.45
PMS1-201ENST00000342075 MRPL50Q8N5N7 158 aaKnown RBP17.84■□□□□ 0.45
PMS1-201ENST00000342075 RGS17Q9UGC6 210 aaPredicted RBP17.84■□□□□ 0.45
PMS1-201ENST00000342075 G2E3Q7L622 706 aa17.84■□□□□ 0.45
PMS1-201ENST00000342075 CRBNQ96SW2 442 aa17.84■□□□□ 0.45
PMS1-201ENST00000342075 CT47B1P0C2W7 299 aaPredicted RBP17.83■□□□□ 0.45
PMS1-201ENST00000342075 GIGYF1O75420 1035 aaPredicted RBP17.82■□□□□ 0.44
PMS1-201ENST00000342075 BRWD3Q6RI45 1802 aa17.82■□□□□ 0.44
PMS1-201ENST00000342075 TTC5Q8N0Z6 440 aa17.82■□□□□ 0.44
PMS1-201ENST00000342075 BABAM1Q9NWV8 329 aa17.82■□□□□ 0.44
PMS1-201ENST00000342075 SLC4A2P04920 1241 aa17.82■□□□□ 0.44
PMS1-201ENST00000342075 TRIM27P14373 513 aa17.82■□□□□ 0.44
PMS1-201ENST00000342075 HDGFL1Q5TGJ6 251 aa17.82■□□□□ 0.44
PMS1-201ENST00000342075 PAPPAQ13219 1627 aa17.81■□□□□ 0.44
PMS1-201ENST00000342075 PROSER3Q2NL68 480 aa17.81■□□□□ 0.44
PMS1-201ENST00000342075 USP16Q9Y5T5 823 aa17.81■□□□□ 0.44
PMS1-201ENST00000342075 HEG1Q9ULI3 1381 aa17.81■□□□□ 0.44
PMS1-201ENST00000342075 KCPQ6ZWJ8 1503 aa17.81■□□□□ 0.44
PMS1-201ENST00000342075 BCL9O00512 1426 aa17.8■□□□□ 0.44
PMS1-201ENST00000342075 ALDH1L2Q3SY69 923 aa17.8■□□□□ 0.44
PMS1-201ENST00000342075 ATG3Q9NT62 314 aa17.8■□□□□ 0.44
PMS1-201ENST00000342075 CHPF2Q9P2E5 772 aa17.8■□□□□ 0.44
PMS1-201ENST00000342075 COG6Q9Y2V7 657 aa17.8■□□□□ 0.44
PMS1-201ENST00000342075 UBR2Q8IWV8 1755 aa17.8■□□□□ 0.44
PMS1-201ENST00000342075 PHAXQ9H814 394 aaKnown RBP17.79■□□□□ 0.44
PMS1-201ENST00000342075 POTEAQ6S8J7 498 aa17.78■□□□□ 0.44
PMS1-201ENST00000342075 ONECUT3O60422 494 aaPredicted RBP17.78■□□□□ 0.44
PMS1-201ENST00000342075 ZKSCAN2Q63HK3 967 aa17.78■□□□□ 0.44
PMS1-201ENST00000342075 RBM42Q9BTD8 480 aaKnown RBP17.78■□□□□ 0.44
PMS1-201ENST00000342075 SLC4A9Q96Q91 983 aa17.77■□□□□ 0.44
PMS1-201ENST00000342075 FMNL2Q96PY5 1086 aa17.77■□□□□ 0.44
PMS1-201ENST00000342075 KCNQ4P56696 695 aa17.77■□□□□ 0.43
PMS1-201ENST00000342075 ZNF772Q68DY9 489 aaPredicted RBP17.77■□□□□ 0.43
PMS1-201ENST00000342075 ATF7IPQ6VMQ6 1270 aa17.77■□□□□ 0.43
PMS1-201ENST00000342075 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.77■□□□□ 0.43
PMS1-201ENST00000342075 F6X3S4 739 aa17.76■□□□□ 0.43
PMS1-201ENST00000342075 CCDC30Q5VVM6 783 aa17.76■□□□□ 0.43
PMS1-201ENST00000342075 KIF16BQ96L93 1317 aa17.75■□□□□ 0.43
PMS1-201ENST00000342075 MYL6BP14649 208 aa17.75■□□□□ 0.43
PMS1-201ENST00000342075 ZNF428Q96B54 188 aa17.75■□□□□ 0.43
PMS1-201ENST00000342075 STK31Q9BXU1 1019 aa17.75■□□□□ 0.43
PMS1-201ENST00000342075 RGS12O14924 1447 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms