RNA–Protein interactions for RNA: ENST00000341372.7

TPM3-207, Transcript of tropomyosin 3, humanhuman

TSL 5 BASIC

Gene TPM3, Length 2,007 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-207ENST00000341372 TNS1Q9HBL0 1735 aaKnown RBP13.98□□□□□ -0.17
TPM3-207ENST00000341372 TMCO4Q5TGY1 634 aa13.97□□□□□ -0.17
TPM3-207ENST00000341372 CCDC125Q86Z20 511 aa13.97□□□□□ -0.17
TPM3-207ENST00000341372 NLRP2Q9NX02 1062 aa13.97□□□□□ -0.17
TPM3-207ENST00000341372 POLKQ9UBT6 870 aa13.97□□□□□ -0.17
TPM3-207ENST00000341372 BCL9O00512 1426 aa13.97□□□□□ -0.17
TPM3-207ENST00000341372 HSP90AB2PQ58FF8 381 aa13.97□□□□□ -0.17
TPM3-207ENST00000341372 DDRGK1Q96HY6 314 aa13.96□□□□□ -0.17
TPM3-207ENST00000341372 OVOS2A0A0G2JMS6 1433 aa13.95□□□□□ -0.18
TPM3-207ENST00000341372 PELP1Q8IZL8 1130 aaKnown RBP13.95□□□□□ -0.18
TPM3-207ENST00000341372 SBF2Q86WG5 1849 aa13.95□□□□□ -0.18
TPM3-207ENST00000341372 SHANK3Q9BYB0 1731 aa13.95□□□□□ -0.18
TPM3-207ENST00000341372 PDE3BQ13370 1112 aa13.95□□□□□ -0.18
TPM3-207ENST00000341372 DDB1Q16531 1140 aa13.95□□□□□ -0.18
TPM3-207ENST00000341372 MORC1Q86VD1 984 aa13.95□□□□□ -0.18
TPM3-207ENST00000341372 LTV1Q96GA3 475 aaPredicted RBP13.95□□□□□ -0.18
TPM3-207ENST00000341372 RNF39Q9H2S5 420 aa13.95□□□□□ -0.18
TPM3-207ENST00000341372 IL2RBP14784 551 aa13.94□□□□□ -0.18
TPM3-207ENST00000341372 RBM25P49756 843 aaKnown RBP13.94□□□□□ -0.18
TPM3-207ENST00000341372 MFAP1P55081 439 aaKnown RBP13.94□□□□□ -0.18
TPM3-207ENST00000341372 FAM196AQ6ZSG2 479 aa13.94□□□□□ -0.18
TPM3-207ENST00000341372 LARP6Q9BRS8 491 aaKnown RBP13.94□□□□□ -0.18
TPM3-207ENST00000341372 CREBZFQ9NS37 354 aa13.94□□□□□ -0.18
TPM3-207ENST00000341372 MEGF6O75095 1541 aa13.93□□□□□ -0.18
TPM3-207ENST00000341372 FAM182BQ5T319 152 aa13.93□□□□□ -0.18
TPM3-207ENST00000341372 NBPF6Q5VWK0 638 aa13.93□□□□□ -0.18
TPM3-207ENST00000341372 NBPF4Q96M43 638 aa13.93□□□□□ -0.18
TPM3-207ENST00000341372 TNNT2P45379 298 aaPredicted RBP13.92□□□□□ -0.18
TPM3-207ENST00000341372 PKD1L3Q7Z443 1732 aa13.91□□□□□ -0.18
TPM3-207ENST00000341372 GZF1Q9H116 711 aaPredicted RBP13.91□□□□□ -0.18
TPM3-207ENST00000341372 MARCH10Q8NA82 808 aaPredicted RBP13.91□□□□□ -0.18
TPM3-207ENST00000341372 EXOC5O00471 708 aa13.9□□□□□ -0.18
TPM3-207ENST00000341372 PPM1GO15355 546 aaPredicted RBP13.9□□□□□ -0.18
TPM3-207ENST00000341372 PLEKHG2Q9H7P9 1386 aa13.9□□□□□ -0.18
TPM3-207ENST00000341372 EIF4A2Q14240 407 aaKnown RBP13.9□□□□□ -0.18
TPM3-207ENST00000341372 NHSQ6T4R5 1651 aa13.89□□□□□ -0.19
TPM3-207ENST00000341372 RGPD3A6NKT7 1758 aaPredicted RBP13.89□□□□□ -0.19
TPM3-207ENST00000341372 RGPD4Q7Z3J3 1758 aa13.89□□□□□ -0.19
TPM3-207ENST00000341372 CC2D1BQ5T0F9 858 aaKnown RBP13.89□□□□□ -0.19
TPM3-207ENST00000341372 RETREG2Q8NC44 543 aa13.88□□□□□ -0.19
TPM3-207ENST00000341372 FBXO22Q8NEZ5 403 aa13.88□□□□□ -0.19
TPM3-207ENST00000341372 IGSF1Q8N6C5 1336 aa13.88□□□□□ -0.19
TPM3-207ENST00000341372 PDAP1Q13442 181 aaKnown RBP13.88□□□□□ -0.19
TPM3-207ENST00000341372 MFSD10Q14728 455 aa13.88□□□□□ -0.19
TPM3-207ENST00000341372 USHBP1Q8N6Y0 703 aa13.88□□□□□ -0.19
TPM3-207ENST00000341372 COL3A1P02461 1466 aaPredicted RBP13.87□□□□□ -0.19
TPM3-207ENST00000341372 DSG3P32926 999 aa13.87□□□□□ -0.19
TPM3-207ENST00000341372 MCM6Q14566 821 aa13.87□□□□□ -0.19
TPM3-207ENST00000341372 EYA1Q99502 592 aa13.87□□□□□ -0.19
TPM3-207ENST00000341372 RREB1Q92766 1687 aa13.87□□□□□ -0.19
TPM3-207ENST00000341372 SF3B2Q13435 895 aaKnown RBP13.86□□□□□ -0.19
TPM3-207ENST00000341372 GPR37O15354 613 aa13.86□□□□□ -0.19
TPM3-207ENST00000341372 TRIM37O94972 964 aa13.86□□□□□ -0.19
TPM3-207ENST00000341372 IRF5Q13568 498 aa13.86□□□□□ -0.19
TPM3-207ENST00000341372 PARP9Q8IXQ6 854 aa13.86□□□□□ -0.19
TPM3-207ENST00000341372 BAG6P46379 1132 aa13.85□□□□□ -0.19
TPM3-207ENST00000341372 DEFB132Q7Z7B7 95 aa13.85□□□□□ -0.19
TPM3-207ENST00000341372 RAPGEF4Q8WZA2 1011 aa13.85□□□□□ -0.19
TPM3-207ENST00000341372 PARD3Q8TEW0 1356 aa13.85□□□□□ -0.19
TPM3-207ENST00000341372 TATP17735 454 aaPredicted RBP13.85□□□□□ -0.19
TPM3-207ENST00000341372 MTHFSP49914 203 aa13.85□□□□□ -0.19
TPM3-207ENST00000341372 KDRP35968 1356 aa13.84□□□□□ -0.19
TPM3-207ENST00000341372 DOT1LQ8TEK3 1739 aa13.84□□□□□ -0.19
TPM3-207ENST00000341372 IL13P35225 146 aa13.84□□□□□ -0.19
TPM3-207ENST00000341372 CAMK2BQ13554 666 aa13.84□□□□□ -0.19
TPM3-207ENST00000341372 ZNF467Q7Z7K2 595 aaPredicted RBP13.84□□□□□ -0.19
TPM3-207ENST00000341372 ZCRB1Q8TBF4 217 aaKnown RBP13.84□□□□□ -0.19
TPM3-207ENST00000341372 GOPCQ9HD26 462 aa13.83□□□□□ -0.2
TPM3-207ENST00000341372 SERPINA10Q9UK55 444 aa13.83□□□□□ -0.2
TPM3-207ENST00000341372 NUP188Q5SRE5 1749 aa13.82□□□□□ -0.2
TPM3-207ENST00000341372 BTAF1O14981 1849 aa13.82□□□□□ -0.2
TPM3-207ENST00000341372 CCDC97Q96F63 343 aaPredicted RBP13.82□□□□□ -0.2
TPM3-207ENST00000341372 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.82□□□□□ -0.24e-7■■■□□ 17.2
TPM3-207ENST00000341372 PCDH11XQ9BZA7 1347 aa13.82□□□□□ -0.2
TPM3-207ENST00000341372 PCDH11YQ9BZA8 1340 aa13.82□□□□□ -0.2
TPM3-207ENST00000341372 CAMKK2Q96RR4 588 aa13.81□□□□□ -0.2
TPM3-207ENST00000341372 TOGARAM1Q9Y4F4 1720 aa13.81□□□□□ -0.2
TPM3-207ENST00000341372 PCDHB8Q9UN66 801 aa13.81□□□□□ -0.2
TPM3-207ENST00000341372 PCDHB13Q9Y5F0 798 aa13.81□□□□□ -0.2
TPM3-207ENST00000341372 APBA3O96018 575 aa13.8□□□□□ -0.2
TPM3-207ENST00000341372 EN1Q05925 392 aaPredicted RBP13.8□□□□□ -0.2
TPM3-207ENST00000341372 PTF1AQ7RTS3 328 aa13.8□□□□□ -0.2
TPM3-207ENST00000341372 DDX27Q96GQ7 796 aaKnown RBP13.8□□□□□ -0.2
TPM3-207ENST00000341372 POM121Q96HA1 1249 aa13.8□□□□□ -0.2
TPM3-207ENST00000341372 PLSCR1O15162 318 aa13.8□□□□□ -0.2
TPM3-207ENST00000341372 PDE4AP27815 886 aa13.8□□□□□ -0.2
TPM3-207ENST00000341372 PPP2R1AP30153 589 aa13.8□□□□□ -0.2
TPM3-207ENST00000341372 DDX54Q8TDD1 881 aaKnown RBP13.8□□□□□ -0.2
TPM3-207ENST00000341372 CYP27B1O15528 508 aa13.79□□□□□ -0.2
TPM3-207ENST00000341372 CRISPLD2Q9H0B8 497 aa13.79□□□□□ -0.2
TPM3-207ENST00000341372 CCDC102AQ96A19 550 aa13.78□□□□□ -0.2
TPM3-207ENST00000341372 SPG7Q9UQ90 795 aa13.78□□□□□ -0.2
TPM3-207ENST00000341372 KAT6BQ8WYB5 2073 aa13.78□□□□□ -0.2
TPM3-207ENST00000341372 KCNQ2O43526 872 aa13.78□□□□□ -0.2
TPM3-207ENST00000341372 DIAPH1O60610 1272 aaKnown RBP13.78□□□□□ -0.2
TPM3-207ENST00000341372 DDX10Q13206 875 aaKnown RBP13.78□□□□□ -0.2
TPM3-207ENST00000341372 EZH2Q15910 746 aaKnown RBP13.78□□□□□ -0.2
TPM3-207ENST00000341372 AMHR2Q16671 573 aa13.78□□□□□ -0.2
TPM3-207ENST00000341372 CNGB1Q14028 1251 aaPredicted RBP13.77□□□□□ -0.21
TPM3-207ENST00000341372 ITGB4P16144 1822 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms