RNA–Protein interactions for RNA: ENST00000340611.8

BRAT1-201, Transcript of BRCA1 associated ATM activator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAT1, Length 2,915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-201ENST00000340611 TWISTNBQ3B726 338 aaPredicted RBP18.99■□□□□ 0.63
BRAT1-201ENST00000340611 COG6Q9Y2V7 657 aa18.99■□□□□ 0.63
BRAT1-201ENST00000340611 COL5A2P05997 1499 aaPredicted RBP18.98■□□□□ 0.63
BRAT1-201ENST00000340611 KCNQ3O43525 872 aa18.98■□□□□ 0.63
BRAT1-201ENST00000340611 AHDC1Q5TGY3 1603 aaPredicted RBP18.97■□□□□ 0.63
BRAT1-201ENST00000340611 FAM208AQ9UK61 1670 aaKnown RBP18.97■□□□□ 0.63
BRAT1-201ENST00000340611 WDR17Q8IZU2 1322 aa18.97■□□□□ 0.63
BRAT1-201ENST00000340611 C1orf141Q5JVX7 400 aa18.97■□□□□ 0.63
BRAT1-201ENST00000340611 TATP17735 454 aaPredicted RBP18.97■□□□□ 0.63
BRAT1-201ENST00000340611 NOB1Q9ULX3 412 aaKnown RBP18.97■□□□□ 0.63
BRAT1-201ENST00000340611 COL16A1Q07092 1604 aaPredicted RBP18.96■□□□□ 0.63
BRAT1-201ENST00000340611 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.96■□□□□ 0.63
BRAT1-201ENST00000340611 LMO7Q8WWI1 1683 aa18.96■□□□□ 0.63
BRAT1-201ENST00000340611 NCAPD2Q15021 1401 aa18.95■□□□□ 0.62
BRAT1-201ENST00000340611 PANK2Q9BZ23 570 aa18.95■□□□□ 0.62
BRAT1-201ENST00000340611 PRDM4Q9UKN5 801 aa18.95■□□□□ 0.62
BRAT1-201ENST00000340611 AKAP4Q5JQC9 854 aa18.94■□□□□ 0.62
BRAT1-201ENST00000340611 CERKQ8TCT0 537 aa18.94■□□□□ 0.62
BRAT1-201ENST00000340611 ARID3AQ99856 593 aa18.94■□□□□ 0.62
BRAT1-201ENST00000340611 CYP27B1O15528 508 aa18.94■□□□□ 0.62
BRAT1-201ENST00000340611 CLCN1P35523 988 aa18.93■□□□□ 0.62
BRAT1-201ENST00000340611 AMOTQ4VCS5 1084 aa18.93■□□□□ 0.62
BRAT1-201ENST00000340611 VIRMAQ69YN4 1812 aaKnown RBP18.93■□□□□ 0.62
BRAT1-201ENST00000340611 RNMTO43148 476 aaKnown RBP18.92■□□□□ 0.62
BRAT1-201ENST00000340611 DDX54Q8TDD1 881 aaKnown RBP18.92■□□□□ 0.62
BRAT1-201ENST00000340611 KAT6BQ8WYB5 2073 aa18.92■□□□□ 0.62
BRAT1-201ENST00000340611 TRIM27P14373 513 aa18.92■□□□□ 0.62
BRAT1-201ENST00000340611 TEFQ10587 303 aa18.92■□□□□ 0.62
BRAT1-201ENST00000340611 TAF7Q15545 349 aaPredicted RBP18.92■□□□□ 0.62
BRAT1-201ENST00000340611 GZF1Q9H116 711 aaPredicted RBP18.92■□□□□ 0.62
BRAT1-201ENST00000340611 L1TD1Q5T7N2 865 aaKnown RBP18.91■□□□□ 0.62
BRAT1-201ENST00000340611 SLC39A6Q13433 755 aa18.9■□□□□ 0.62
BRAT1-201ENST00000340611 HTATSF1O43719 755 aaKnown RBP18.9■□□□□ 0.62
BRAT1-201ENST00000340611 PHKG2P15735 406 aa18.9■□□□□ 0.62
BRAT1-201ENST00000340611 CEMIPQ8WUJ3 1361 aa18.89■□□□□ 0.61
BRAT1-201ENST00000340611 ZKSCAN2Q63HK3 967 aa18.89■□□□□ 0.61
BRAT1-201ENST00000340611 PDIA4P13667 645 aaKnown RBP18.89■□□□□ 0.61
BRAT1-201ENST00000340611 MRPL50Q8N5N7 158 aaKnown RBP18.89■□□□□ 0.61
BRAT1-201ENST00000340611 PRAMEF22A3QJZ6 481 aa18.88■□□□□ 0.61
BRAT1-201ENST00000340611 BTBD11A6QL63 1104 aa18.88■□□□□ 0.61
BRAT1-201ENST00000340611 XRCC6P12956 609 aaKnown RBP eCLIP18.88■□□□□ 0.61
BRAT1-201ENST00000340611 NFATC2IPQ8NCF5 419 aa18.88■□□□□ 0.61
BRAT1-201ENST00000340611 SPG7Q9UQ90 795 aa18.88■□□□□ 0.61
BRAT1-201ENST00000340611 LRRC37A3O60309 1634 aa18.88■□□□□ 0.61
BRAT1-201ENST00000340611 FTSJ3Q8IY81 847 aaKnown RBP18.88■□□□□ 0.61
BRAT1-201ENST00000340611 SLKQ9H2G2 1235 aaPredicted RBP18.88■□□□□ 0.61
BRAT1-201ENST00000340611 CT47B1P0C2W7 299 aaPredicted RBP18.87■□□□□ 0.61
BRAT1-201ENST00000340611 CARD10Q9BWT7 1032 aa18.87■□□□□ 0.61
BRAT1-201ENST00000340611 KDM6AO15550 1401 aaPredicted RBP18.87■□□□□ 0.61
BRAT1-201ENST00000340611 IL2RBP14784 551 aa18.87■□□□□ 0.61
BRAT1-201ENST00000340611 EIF2S2P20042 333 aaKnown RBP18.87■□□□□ 0.61
BRAT1-201ENST00000340611 ATF7IPQ6VMQ6 1270 aa18.86■□□□□ 0.61
BRAT1-201ENST00000340611 G2E3Q7L622 706 aa18.86■□□□□ 0.61
BRAT1-201ENST00000340611 C8orf37Q96NL8 207 aa18.86■□□□□ 0.61
BRAT1-201ENST00000340611 DZIP1LQ8IYY4 767 aaKnown RBP18.86■□□□□ 0.61
BRAT1-201ENST00000340611 IFNL2Q8IZJ0 200 aa18.86■□□□□ 0.61
BRAT1-201ENST00000340611 ZCRB1Q8TBF4 217 aaKnown RBP18.86■□□□□ 0.61
BRAT1-201ENST00000340611 CCDC9Q9Y3X0 531 aaKnown RBP18.86■□□□□ 0.61
BRAT1-201ENST00000340611 IGHDP01880 384 aa18.85■□□□□ 0.61
BRAT1-201ENST00000340611 HSPA1LP34931 641 aa18.85■□□□□ 0.61
BRAT1-201ENST00000340611 TMEM57Q8N5G2 664 aa18.85■□□□□ 0.61
BRAT1-201ENST00000340611 PDCL3Q9H2J4 239 aa18.85■□□□□ 0.61
BRAT1-201ENST00000340611 COL22A1Q8NFW1 1626 aaPredicted RBP18.85■□□□□ 0.61
BRAT1-201ENST00000340611 SEC24BO95487 1268 aa18.85■□□□□ 0.61
BRAT1-201ENST00000340611 ANXA1P04083 346 aa18.85■□□□□ 0.61
BRAT1-201ENST00000340611 SLC4A2P04920 1241 aa18.85■□□□□ 0.61
BRAT1-201ENST00000340611 PDE3AQ14432 1141 aa18.85■□□□□ 0.61
BRAT1-201ENST00000340611 ITPRIPQ8IWB1 547 aa18.85■□□□□ 0.61
BRAT1-201ENST00000340611 ALDH1L2Q3SY69 923 aa18.84■□□□□ 0.61
BRAT1-201ENST00000340611 ABCC6O95255 1503 aa18.84■□□□□ 0.61
BRAT1-201ENST00000340611 OVOS2A0A0G2JMS6 1433 aa18.83■□□□□ 0.61
BRAT1-201ENST00000340611 ZHX1Q9UKY1 873 aaPredicted RBP18.83■□□□□ 0.61
BRAT1-201ENST00000340611 EIF4A1P60842 406 aaKnown RBP18.82■□□□□ 0.6
BRAT1-201ENST00000340611 COL14A1Q05707 1796 aaKnown RBP18.82■□□□□ 0.6
BRAT1-201ENST00000340611 GOLGA6L3A6NEY3 463 aa18.81■□□□□ 0.6
BRAT1-201ENST00000340611 BBXQ8WY36 941 aaPredicted RBP18.81■□□□□ 0.6
BRAT1-201ENST00000340611 KIF16BQ96L93 1317 aa18.81■□□□□ 0.6
BRAT1-201ENST00000340611 F6X3S4 739 aa18.8■□□□□ 0.6
BRAT1-201ENST00000340611 NGLY1Q96IV0 654 aa18.8■□□□□ 0.6
BRAT1-201ENST00000340611 SLC52A2Q9HAB3 445 aa18.8■□□□□ 0.6
BRAT1-201ENST00000340611 PLCH1Q4KWH8 1693 aa18.8■□□□□ 0.6
BRAT1-201ENST00000340611 MVPQ14764 893 aaKnown RBP18.8■□□□□ 0.6
BRAT1-201ENST00000340611 SCN11AQ9UI33 1791 aa18.79■□□□□ 0.6
BRAT1-201ENST00000340611 PIP4K2AP48426 406 aaPredicted RBP18.79■□□□□ 0.6
BRAT1-201ENST00000340611 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.79■□□□□ 0.6
BRAT1-201ENST00000340611 PKD1L3Q7Z443 1732 aa18.79■□□□□ 0.6
BRAT1-201ENST00000340611 HDGFL1Q5TGJ6 251 aa18.79■□□□□ 0.6
BRAT1-201ENST00000340611 A0A0G2JS52 829 aa18.78■□□□□ 0.6
BRAT1-201ENST00000340611 ZNF428Q96B54 188 aa18.78■□□□□ 0.6
BRAT1-201ENST00000340611 PCDHB15Q9Y5E8 787 aa18.78■□□□□ 0.6
BRAT1-201ENST00000340611 CABP4P57796 275 aa18.78■□□□□ 0.6
BRAT1-201ENST00000340611 DCAF5Q96JK2 942 aa18.78■□□□□ 0.6
BRAT1-201ENST00000340611 C1orf115Q9H7X2 142 aa18.78■□□□□ 0.6
BRAT1-201ENST00000340611 PHAXQ9H814 394 aaKnown RBP18.78■□□□□ 0.6
BRAT1-201ENST00000340611 PCDH11XQ9BZA7 1347 aa18.77■□□□□ 0.6
BRAT1-201ENST00000340611 PCDH11YQ9BZA8 1340 aa18.77■□□□□ 0.6
BRAT1-201ENST00000340611 IPO8O15397 1037 aaKnown RBP18.77■□□□□ 0.6
BRAT1-201ENST00000340611 KDM3BQ7LBC6 1761 aa18.77■□□□□ 0.6
BRAT1-201ENST00000340611 PARP4Q9UKK3 1724 aaKnown RBP18.77■□□□□ 0.6
BRAT1-201ENST00000340611 PRDM10Q9NQV6 1147 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms