RNA–Protein interactions for RNA: ENST00000340480.8

HIPK1-201, Transcript of homeodomain interacting protein kinase 1, humanhuman

TSL 1 (best) BASIC

Gene HIPK1, Length 6,997 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK1-201ENST00000340480 GSE1Q14687 1217 aa9.21□□□□□ -0.94
HIPK1-201ENST00000340480 CNKSR2Q8WXI2 1034 aa9.21□□□□□ -0.94
HIPK1-201ENST00000340480 NUCB1Q02818 461 aa9.2□□□□□ -0.94
HIPK1-201ENST00000340480 TULP4Q9NRJ4 1543 aa9.2□□□□□ -0.94
HIPK1-201ENST00000340480 ALDH1L1O75891 902 aa9.2□□□□□ -0.94
HIPK1-201ENST00000340480 ZC3H6P61129 1189 aaKnown RBP9.2□□□□□ -0.94
HIPK1-201ENST00000340480 PTPRMP28827 1452 aa9.2□□□□□ -0.94
HIPK1-201ENST00000340480 PIK3C2BO00750 1634 aa9.2□□□□□ -0.94
HIPK1-201ENST00000340480 AEBP1Q8IUX7 1158 aa9.2□□□□□ -0.94
HIPK1-201ENST00000340480 AMOTL1Q8IY63 956 aa9.2□□□□□ -0.94
HIPK1-201ENST00000340480 PLEKHF1Q96S99 279 aa9.2□□□□□ -0.94
HIPK1-201ENST00000340480 ZRANB1Q9UGI0 708 aa9.2□□□□□ -0.94
HIPK1-201ENST00000340480 PTCH1Q13635 1447 aa9.2□□□□□ -0.94
HIPK1-201ENST00000340480 PSMA5P28066 241 aa9.2□□□□□ -0.94
HIPK1-201ENST00000340480 MTHFSDQ2M296 383 aaKnown RBP9.2□□□□□ -0.94
HIPK1-201ENST00000340480 PCDHB15Q9Y5E8 787 aa9.2□□□□□ -0.94
HIPK1-201ENST00000340480 PNPLA6Q8IY17 1366 aa9.2□□□□□ -0.94
HIPK1-201ENST00000340480 SRGAP3O43295 1099 aa9.19□□□□□ -0.94
HIPK1-201ENST00000340480 FMNL2Q96PY5 1086 aa9.19□□□□□ -0.94
HIPK1-201ENST00000340480 TEX13AQ9BXU3 409 aaPredicted RBP9.19□□□□□ -0.94
HIPK1-201ENST00000340480 TCEAL9Q9UHQ7 104 aa9.19□□□□□ -0.94
HIPK1-201ENST00000340480 IGHDP01880 384 aa9.19□□□□□ -0.94
HIPK1-201ENST00000340480 TPM4P67936 248 aa9.19□□□□□ -0.94
HIPK1-201ENST00000340480 VPS53Q5VIR6 699 aa9.19□□□□□ -0.94
HIPK1-201ENST00000340480 KIF6Q6ZMV9 814 aa9.19□□□□□ -0.94
HIPK1-201ENST00000340480 GCP02774 474 aa9.19□□□□□ -0.94
HIPK1-201ENST00000340480 AIMP1Q12904 312 aaKnown RBP9.19□□□□□ -0.94
HIPK1-201ENST00000340480 NPHP4O75161 1426 aaPredicted RBP9.19□□□□□ -0.94
HIPK1-201ENST00000340480 PREX1Q8TCU6 1659 aa9.19□□□□□ -0.94
HIPK1-201ENST00000340480 FAM83GA6ND36 823 aa9.19□□□□□ -0.94
HIPK1-201ENST00000340480 C8orf58Q8NAV2 365 aa9.19□□□□□ -0.94
HIPK1-201ENST00000340480 RASSF8Q8NHQ8 419 aa9.19□□□□□ -0.94
HIPK1-201ENST00000340480 GLRX3O76003 335 aaKnown RBP9.18□□□□□ -0.94
HIPK1-201ENST00000340480 NFKBIBQ15653 356 aa9.18□□□□□ -0.94
HIPK1-201ENST00000340480 MX1P20591 662 aa9.18□□□□□ -0.94
HIPK1-201ENST00000340480 SLC4A3P48751 1232 aa9.17□□□□□ -0.94
HIPK1-201ENST00000340480 MYO3AQ8NEV4 1616 aa9.17□□□□□ -0.94
HIPK1-201ENST00000340480 XPCQ01831 940 aaPredicted RBP9.17□□□□□ -0.94
HIPK1-201ENST00000340480 USP31Q70CQ4 1352 aa9.17□□□□□ -0.94
HIPK1-201ENST00000340480 CPLX2Q6PUV4 134 aaKnown RBP9.17□□□□□ -0.94
HIPK1-201ENST00000340480 DCTPP1Q9H773 170 aa9.17□□□□□ -0.94
HIPK1-201ENST00000340480 K7ELQ4 463 aaPredicted RBP9.17□□□□□ -0.94
HIPK1-201ENST00000340480 RLBP1P12271 317 aa9.17□□□□□ -0.94
HIPK1-201ENST00000340480 TBC1D32Q96NH3 1257 aa9.17□□□□□ -0.94
HIPK1-201ENST00000340480 CPSF1Q10570 1443 aaKnown RBP9.17□□□□□ -0.94
HIPK1-201ENST00000340480 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.17□□□□□ -0.94
HIPK1-201ENST00000340480 PRR36Q9H6K5 1346 aa9.16□□□□□ -0.94
HIPK1-201ENST00000340480 CLTCQ00610 1675 aaKnown RBP9.16□□□□□ -0.94
HIPK1-201ENST00000340480 SF3B2Q13435 895 aaKnown RBP9.16□□□□□ -0.94
HIPK1-201ENST00000340480 IGSF1Q8N6C5 1336 aa9.16□□□□□ -0.94
HIPK1-201ENST00000340480 NCKAP5LQ9HCH0 1330 aa9.16□□□□□ -0.94
HIPK1-201ENST00000340480 PPLO60437 1756 aa9.16□□□□□ -0.94
HIPK1-201ENST00000340480 FBLN1P23142 703 aa9.16□□□□□ -0.94
HIPK1-201ENST00000340480 SNRPA1P09661 255 aaKnown RBP9.16□□□□□ -0.94
HIPK1-201ENST00000340480 HSP90AB3PQ58FF7 597 aa9.16□□□□□ -0.94
HIPK1-201ENST00000340480 FSD1Q9BTV5 496 aa9.16□□□□□ -0.94
HIPK1-201ENST00000340480 STARD3NLO95772 234 aa9.16□□□□□ -0.94
HIPK1-201ENST00000340480 PDCP20941 246 aa9.15□□□□□ -0.94
HIPK1-201ENST00000340480 USHBP1Q8N6Y0 703 aa9.15□□□□□ -0.94
HIPK1-201ENST00000340480 MIS18AQ9NYP9 233 aa9.15□□□□□ -0.94
HIPK1-201ENST00000340480 MPRIPQ6WCQ1 1025 aa9.15□□□□□ -0.94
HIPK1-201ENST00000340480 DRC7Q8IY82 874 aa9.15□□□□□ -0.94
HIPK1-201ENST00000340480 DDX49Q9Y6V7 483 aaKnown RBP9.15□□□□□ -0.94
HIPK1-201ENST00000340480 ABCC4O15439 1325 aa9.15□□□□□ -0.94
HIPK1-201ENST00000340480 KLHL34Q8N239 644 aa9.15□□□□□ -0.94
HIPK1-201ENST00000340480 USP32Q8NFA0 1604 aa9.15□□□□□ -0.94
HIPK1-201ENST00000340480 ANKRD1Q15327 319 aa9.15□□□□□ -0.94
HIPK1-201ENST00000340480 MBD3O95983 291 aa9.15□□□□□ -0.95
HIPK1-201ENST00000340480 STRN4Q9NRL3 753 aa9.15□□□□□ -0.95
HIPK1-201ENST00000340480 ZBTB7BO15156 539 aaPredicted RBP9.15□□□□□ -0.95
HIPK1-201ENST00000340480 TTC22Q5TAA0 569 aa9.15□□□□□ -0.95
HIPK1-201ENST00000340480 DCAF5Q96JK2 942 aa9.15□□□□□ -0.95
HIPK1-201ENST00000340480 ATP8B2P98198 1209 aa9.14□□□□□ -0.95
HIPK1-201ENST00000340480 C8orf34Q49A92 452 aa9.14□□□□□ -0.95
HIPK1-201ENST00000340480 ADGRL3Q9HAR2 1447 aa9.14□□□□□ -0.95
HIPK1-201ENST00000340480 TMEM131LA2VDJ0 1609 aa9.14□□□□□ -0.95
HIPK1-201ENST00000340480 ZNF853P0CG23 659 aa9.14□□□□□ -0.95
HIPK1-201ENST00000340480 KRT32Q14532 448 aa9.14□□□□□ -0.95
HIPK1-201ENST00000340480 RICTORQ6R327 1708 aa9.14□□□□□ -0.95
HIPK1-201ENST00000340480 KSR2Q6VAB6 950 aa9.14□□□□□ -0.95
HIPK1-201ENST00000340480 TSPYL6Q8N831 410 aa9.14□□□□□ -0.95
HIPK1-201ENST00000340480 LINS1Q8NG48 757 aa9.14□□□□□ -0.95
HIPK1-201ENST00000340480 SMC3Q9UQE7 1217 aa9.14□□□□□ -0.95
HIPK1-201ENST00000340480 CDC42BPGQ6DT37 1551 aa9.14□□□□□ -0.95
HIPK1-201ENST00000340480 DIP2AQ14689 1571 aa9.14□□□□□ -0.95
HIPK1-201ENST00000340480 EXOC6BQ9Y2D4 811 aa9.14□□□□□ -0.95
HIPK1-201ENST00000340480 LRRFIP2Q9Y608 721 aaKnown RBP9.14□□□□□ -0.95
HIPK1-201ENST00000340480 ZSCAN31Q96LW9 406 aaPredicted RBP9.13□□□□□ -0.95
HIPK1-201ENST00000340480 TMOD3Q9NYL9 352 aa9.13□□□□□ -0.95
HIPK1-201ENST00000340480 TOMM22Q9NS69 142 aa9.13□□□□□ -0.95
HIPK1-201ENST00000340480 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.13□□□□□ -0.952e-6■□□□□ 8.6
HIPK1-201ENST00000340480 NEK4P51957 841 aa9.13□□□□□ -0.95
HIPK1-201ENST00000340480 F6X3S4 739 aa9.13□□□□□ -0.95
HIPK1-201ENST00000340480 TRDNQ13061 729 aa9.13□□□□□ -0.95
HIPK1-201ENST00000340480 AOX1Q06278 1338 aa9.12□□□□□ -0.95
HIPK1-201ENST00000340480 ZSCAN25Q6NSZ9 544 aa9.12□□□□□ -0.95
HIPK1-201ENST00000340480 FAM184AQ8NB25 1140 aa9.12□□□□□ -0.95
HIPK1-201ENST00000340480 SYTL4Q96C24 671 aaPredicted RBP9.12□□□□□ -0.95
HIPK1-201ENST00000340480 PTPRUQ92729 1446 aa9.12□□□□□ -0.95
HIPK1-201ENST00000340480 CCDC158Q5M9N0 1113 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms