RNA–Protein interactions for RNA: ENST00000339397.4

SRFBP1-201, Transcript of serum response factor binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRFBP1, Length 2,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1-201ENST00000339397 IPO9Q96P70 1041 aaKnown RBP9.34□□□□□ -0.92
SRFBP1-201ENST00000339397 SLC4A3P48751 1232 aa9.33□□□□□ -0.92
SRFBP1-201ENST00000339397 FKBP5Q13451 457 aaPredicted RBP9.33□□□□□ -0.92
SRFBP1-201ENST00000339397 HDGFL1Q5TGJ6 251 aa9.33□□□□□ -0.92
SRFBP1-201ENST00000339397 ANKRD45Q5TZF3 282 aa9.33□□□□□ -0.92
SRFBP1-201ENST00000339397 KIF1AQ12756 1690 aa9.33□□□□□ -0.92
SRFBP1-201ENST00000339397 AMOTQ4VCS5 1084 aa9.33□□□□□ -0.92
SRFBP1-201ENST00000339397 STK31Q9BXU1 1019 aa9.33□□□□□ -0.92
SRFBP1-201ENST00000339397 APBB1O00213 710 aa9.32□□□□□ -0.92
SRFBP1-201ENST00000339397 CCDC30Q5VVM6 783 aa9.32□□□□□ -0.92
SRFBP1-201ENST00000339397 RAPGEF4Q8WZA2 1011 aa9.32□□□□□ -0.92
SRFBP1-201ENST00000339397 CHPF2Q9P2E5 772 aa9.32□□□□□ -0.92
SRFBP1-201ENST00000339397 PTPRCP08575 1304 aa9.32□□□□□ -0.92
SRFBP1-201ENST00000339397 SOS2Q07890 1332 aaPredicted RBP9.32□□□□□ -0.92
SRFBP1-201ENST00000339397 CYP27B1O15528 508 aa9.32□□□□□ -0.92
SRFBP1-201ENST00000339397 NUCB1Q02818 461 aa9.32□□□□□ -0.92
SRFBP1-201ENST00000339397 TPRNQ4KMQ1 711 aa9.32□□□□□ -0.92
SRFBP1-201ENST00000339397 NFATC2IPQ8NCF5 419 aa9.32□□□□□ -0.92
SRFBP1-201ENST00000339397 FBXO41Q8TF61 875 aa9.32□□□□□ -0.92
SRFBP1-201ENST00000339397 PRDM11Q9NQV5 511 aa9.32□□□□□ -0.92
SRFBP1-201ENST00000339397 PHRF1Q9P1Y6 1649 aaKnown RBP9.31□□□□□ -0.92
SRFBP1-201ENST00000339397 MEGF6O75095 1541 aa9.31□□□□□ -0.92
SRFBP1-201ENST00000339397 PROSER3Q2NL68 480 aa9.31□□□□□ -0.92
SRFBP1-201ENST00000339397 CHD1LQ86WJ1 897 aa9.31□□□□□ -0.92
SRFBP1-201ENST00000339397 C16orf71Q8IYS4 520 aaPredicted RBP9.31□□□□□ -0.92
SRFBP1-201ENST00000339397 NCAPD2Q15021 1401 aa9.31□□□□□ -0.92
SRFBP1-201ENST00000339397 HAP1P54257 671 aaPredicted RBP9.31□□□□□ -0.92
SRFBP1-201ENST00000339397 USP35Q9P2H5 1018 aa9.31□□□□□ -0.92
SRFBP1-201ENST00000339397 LRRC37A3O60309 1634 aa9.31□□□□□ -0.92
SRFBP1-201ENST00000339397 STRN4Q9NRL3 753 aa9.3□□□□□ -0.92
SRFBP1-201ENST00000339397 CEP85Q6P2H3 762 aa9.3□□□□□ -0.92
SRFBP1-201ENST00000339397 SMARCA5O60264 1052 aaPredicted RBP9.3□□□□□ -0.92
SRFBP1-201ENST00000339397 GIGYF1O75420 1035 aaPredicted RBP9.3□□□□□ -0.92
SRFBP1-201ENST00000339397 PHKG2P15735 406 aa9.3□□□□□ -0.92
SRFBP1-201ENST00000339397 PIP4K2AP48426 406 aaPredicted RBP9.3□□□□□ -0.92
SRFBP1-201ENST00000339397 OTUD7AQ8TE49 926 aaPredicted RBP9.3□□□□□ -0.92
SRFBP1-201ENST00000339397 NOP58Q9Y2X3 529 aaKnown RBP9.3□□□□□ -0.92
SRFBP1-201ENST00000339397 COL18A1P39060 1754 aa9.29□□□□□ -0.92
SRFBP1-201ENST00000339397 TATP17735 454 aaPredicted RBP9.29□□□□□ -0.92
SRFBP1-201ENST00000339397 TOM1L2Q6ZVM7 507 aa9.29□□□□□ -0.92
SRFBP1-201ENST00000339397 LARP1Q6PKG0 1096 aaKnown RBP9.29□□□□□ -0.92
SRFBP1-201ENST00000339397 BABAM1Q9NWV8 329 aa9.29□□□□□ -0.92
SRFBP1-201ENST00000339397 ZBTB47Q9UFB7 747 aaPredicted RBP9.29□□□□□ -0.92
SRFBP1-201ENST00000339397 KDM6AO15550 1401 aaPredicted RBP9.29□□□□□ -0.92
SRFBP1-201ENST00000339397 ATP10DQ9P241 1426 aa9.29□□□□□ -0.92
SRFBP1-201ENST00000339397 CAMTA1Q9Y6Y1 1673 aa9.28□□□□□ -0.92
SRFBP1-201ENST00000339397 PI4KAP2A4QPH2 592 aa9.28□□□□□ -0.92
SRFBP1-201ENST00000339397 NPM3O75607 178 aaKnown RBP9.28□□□□□ -0.92
SRFBP1-201ENST00000339397 ANKRD44Q8N8A2 993 aa9.28□□□□□ -0.92
SRFBP1-201ENST00000339397 PI4KAP1Q8N8J0 262 aa9.28□□□□□ -0.92
SRFBP1-201ENST00000339397 USP44Q9H0E7 712 aa9.28□□□□□ -0.92
SRFBP1-201ENST00000339397 PNMA6EA0A0J9YXQ4 647 aa9.27□□□□□ -0.92
SRFBP1-201ENST00000339397 ZNF790Q6PG37 636 aa9.27□□□□□ -0.92
SRFBP1-201ENST00000339397 DCTPP1Q9H773 170 aa9.27□□□□□ -0.92
SRFBP1-201ENST00000339397 CPDO75976 1380 aa9.27□□□□□ -0.93
SRFBP1-201ENST00000339397 GCC1Q96CN9 775 aa9.27□□□□□ -0.93
SRFBP1-201ENST00000339397 ZNF496Q96IT1 587 aaPredicted RBP9.27□□□□□ -0.93
SRFBP1-201ENST00000339397 ANP32EQ9BTT0 268 aa9.27□□□□□ -0.93
SRFBP1-201ENST00000339397 SLC52A2Q9HAB3 445 aa9.27□□□□□ -0.93
SRFBP1-201ENST00000339397 NBPF7P0C2Y1 421 aaPredicted RBP9.26□□□□□ -0.93
SRFBP1-201ENST00000339397 CCT4P50991 539 aaKnown RBP9.26□□□□□ -0.93
SRFBP1-201ENST00000339397 AIMP1Q12904 312 aaKnown RBP9.26□□□□□ -0.93
SRFBP1-201ENST00000339397 IFNL2Q8IZJ0 200 aa9.26□□□□□ -0.93
SRFBP1-201ENST00000339397 DDX54Q8TDD1 881 aaKnown RBP9.26□□□□□ -0.93
SRFBP1-201ENST00000339397 CHMP4BQ9H444 224 aaKnown RBP9.26□□□□□ -0.93
SRFBP1-201ENST00000339397 SPG7Q9UQ90 795 aa9.26□□□□□ -0.93
SRFBP1-201ENST00000339397 LRRFIP2Q9Y608 721 aaKnown RBP9.26□□□□□ -0.93
SRFBP1-201ENST00000339397 EXOC6BQ9Y2D4 811 aa9.26□□□□□ -0.93
SRFBP1-201ENST00000339397 USP16Q9Y5T5 823 aa9.26□□□□□ -0.93
SRFBP1-201ENST00000339397 LMO7Q8WWI1 1683 aa9.26□□□□□ -0.93
SRFBP1-201ENST00000339397 FAM208AQ9UK61 1670 aaKnown RBP9.26□□□□□ -0.93
SRFBP1-201ENST00000339397 ERICH6Q7L0X2 663 aa9.26□□□□□ -0.93
SRFBP1-201ENST00000339397 WDR17Q8IZU2 1322 aa9.25□□□□□ -0.93
SRFBP1-201ENST00000339397 MYL6BP14649 208 aa9.25□□□□□ -0.93
SRFBP1-201ENST00000339397 EVA1CP58658 441 aa9.25□□□□□ -0.93
SRFBP1-201ENST00000339397 PDIA6Q15084 440 aa9.25□□□□□ -0.93
SRFBP1-201ENST00000339397 RPAP2Q8IXW5 612 aaPredicted RBP9.25□□□□□ -0.93
SRFBP1-201ENST00000339397 CRYBG1Q9Y4K1 1723 aa9.25□□□□□ -0.93
SRFBP1-201ENST00000339397 HEG1Q9ULI3 1381 aa9.25□□□□□ -0.93
SRFBP1-201ENST00000339397 GNAI2P04899 355 aa9.25□□□□□ -0.93
SRFBP1-201ENST00000339397 MFAP1P55081 439 aaKnown RBP9.25□□□□□ -0.93
SRFBP1-201ENST00000339397 CWF19L2Q2TBE0 894 aaKnown RBP9.25□□□□□ -0.93
SRFBP1-201ENST00000339397 TSHZ3Q63HK5 1081 aa9.25□□□□□ -0.93
SRFBP1-201ENST00000339397 PLEKHM2Q8IWE5 1019 aa9.25□□□□□ -0.93
SRFBP1-201ENST00000339397 BEND3Q5T5X7 828 aa9.24□□□□□ -0.93
SRFBP1-201ENST00000339397 BTG4Q9NY30 223 aa9.24□□□□□ -0.93
SRFBP1-201ENST00000339397 MAP3K2Q9Y2U5 619 aa9.24□□□□□ -0.93
SRFBP1-201ENST00000339397 ADCY9O60503 1353 aa9.24□□□□□ -0.93
SRFBP1-201ENST00000339397 VIRMAQ69YN4 1812 aaKnown RBP9.24□□□□□ -0.93
SRFBP1-201ENST00000339397 GSPT1P15170 499 aaKnown RBP9.24□□□□□ -0.93
SRFBP1-201ENST00000339397 DNAAF4Q8WXU2 420 aa9.24□□□□□ -0.93
SRFBP1-201ENST00000339397 DCAF5Q96JK2 942 aa9.24□□□□□ -0.93
SRFBP1-201ENST00000339397 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.24□□□□□ -0.931e-6■■■■□ 20.6
SRFBP1-201ENST00000339397 DBF4Q9UBU7 674 aaPredicted RBP9.24□□□□□ -0.93
SRFBP1-201ENST00000339397 KDM3BQ7LBC6 1761 aa9.23□□□□□ -0.93
SRFBP1-201ENST00000339397 COL5A2P05997 1499 aaPredicted RBP9.23□□□□□ -0.93
SRFBP1-201ENST00000339397 ZCRB1Q8TBF4 217 aaKnown RBP9.23□□□□□ -0.93
SRFBP1-201ENST00000339397 HOXB7P09629 217 aa9.23□□□□□ -0.93
SRFBP1-201ENST00000339397 CABP4P57796 275 aa9.23□□□□□ -0.93
SRFBP1-201ENST00000339397 NBR1Q14596 966 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms