RNA–Protein interactions for RNA: ENST00000338962.8

LRP1-202, Transcript of LDL receptor related protein 1, humanhuman

TSL 1 (best) BASIC

Gene LRP1, Length 2,169 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1-202ENST00000338962 PCDHB15Q9Y5E8 787 aa14.09□□□□□ -0.15
LRP1-202ENST00000338962 ELL2O00472 640 aaPredicted RBP14.09□□□□□ -0.15
LRP1-202ENST00000338962 MSH5O43196 834 aa14.09□□□□□ -0.15
LRP1-202ENST00000338962 RBM6P78332 1123 aaKnown RBP14.09□□□□□ -0.15
LRP1-202ENST00000338962 POTEAQ6S8J7 498 aa14.09□□□□□ -0.15
LRP1-202ENST00000338962 TSPYL6Q8N831 410 aa14.09□□□□□ -0.15
LRP1-202ENST00000338962 USP35Q9P2H5 1018 aa14.09□□□□□ -0.15
LRP1-202ENST00000338962 CCDC9Q9Y3X0 531 aaKnown RBP14.09□□□□□ -0.15
LRP1-202ENST00000338962 RGPD5Q99666 1765 aa14.09□□□□□ -0.15
LRP1-202ENST00000338962 CDCA7Q9BWT1 371 aaPredicted RBP14.08□□□□□ -0.16
LRP1-202ENST00000338962 PLEKHG2Q9H7P9 1386 aa14.08□□□□□ -0.16
LRP1-202ENST00000338962 MCM10Q7L590 875 aa14.07□□□□□ -0.16
LRP1-202ENST00000338962 USHBP1Q8N6Y0 703 aa14.07□□□□□ -0.16
LRP1-202ENST00000338962 RWDD1Q9H446 243 aaPredicted RBP14.07□□□□□ -0.16
LRP1-202ENST00000338962 TMEM57Q8N5G2 664 aa14.07□□□□□ -0.16
LRP1-202ENST00000338962 RTF1Q92541 710 aaKnown RBP14.07□□□□□ -0.16
LRP1-202ENST00000338962 IL2RBP14784 551 aa14.06□□□□□ -0.16
LRP1-202ENST00000338962 C8orf58Q8NAV2 365 aa14.06□□□□□ -0.16
LRP1-202ENST00000338962 GAS2L2Q8NHY3 880 aa14.06□□□□□ -0.16
LRP1-202ENST00000338962 DISP2A7MBM2 1401 aa14.06□□□□□ -0.16
LRP1-202ENST00000338962 FAM208AQ9UK61 1670 aaKnown RBP14.06□□□□□ -0.16
LRP1-202ENST00000338962 RXRBP28702 533 aa14.06□□□□□ -0.16
LRP1-202ENST00000338962 MTHFSDQ2M296 383 aaKnown RBP14.06□□□□□ -0.16
LRP1-202ENST00000338962 MRPL50Q8N5N7 158 aaKnown RBP14.06□□□□□ -0.16
LRP1-202ENST00000338962 ARHGAP45Q92619 1136 aa14.06□□□□□ -0.16
LRP1-202ENST00000338962 RAPGEF4Q8WZA2 1011 aa14.05□□□□□ -0.16
LRP1-202ENST00000338962 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.05□□□□□ -0.16
LRP1-202ENST00000338962 CHL1O00533 1208 aa14.05□□□□□ -0.16
LRP1-202ENST00000338962 FAM98CQ17RN3 349 aaKnown RBP14.05□□□□□ -0.16
LRP1-202ENST00000338962 FAM161AQ3B820 660 aa14.05□□□□□ -0.16
LRP1-202ENST00000338962 GLI3P10071 1580 aa14.04□□□□□ -0.16
LRP1-202ENST00000338962 NPM2Q86SE8 214 aaKnown RBP14.04□□□□□ -0.16
LRP1-202ENST00000338962 TATP17735 454 aaPredicted RBP14.03□□□□□ -0.16
LRP1-202ENST00000338962 OVOS2A0A0G2JMS6 1433 aa14.03□□□□□ -0.16
LRP1-202ENST00000338962 IPO9Q96P70 1041 aaKnown RBP14.02□□□□□ -0.16
LRP1-202ENST00000338962 CHMP4BQ9H444 224 aaKnown RBP14.02□□□□□ -0.16
LRP1-202ENST00000338962 ZBTB40Q9NUA8 1239 aa14.02□□□□□ -0.16
LRP1-202ENST00000338962 MEGF6O75095 1541 aa14.02□□□□□ -0.16
LRP1-202ENST00000338962 AMOTQ4VCS5 1084 aa14.02□□□□□ -0.17
LRP1-202ENST00000338962 EXOC5O00471 708 aa14.01□□□□□ -0.17
LRP1-202ENST00000338962 HTATSF1O43719 755 aaKnown RBP14.01□□□□□ -0.17
LRP1-202ENST00000338962 HDAC1Q13547 482 aaPredicted RBP14.01□□□□□ -0.17
LRP1-202ENST00000338962 SEPT12Q8IYM1 358 aa14.01□□□□□ -0.17
LRP1-202ENST00000338962 C8orf34Q49A92 452 aa14□□□□□ -0.17
LRP1-202ENST00000338962 PLEKHO1Q53GL0 409 aaPredicted RBP14□□□□□ -0.17
LRP1-202ENST00000338962 ZCRB1Q8TBF4 217 aaKnown RBP14□□□□□ -0.17
LRP1-202ENST00000338962 API5Q9BZZ5 524 aaKnown RBP14□□□□□ -0.17
LRP1-202ENST00000338962 TSPYL4Q9UJ04 414 aa14□□□□□ -0.17
LRP1-202ENST00000338962 GNAT3A8MTJ3 354 aa14□□□□□ -0.17
LRP1-202ENST00000338962 DDB1Q16531 1140 aa14□□□□□ -0.17
LRP1-202ENST00000338962 RGPD2P0DJD1 1756 aa14□□□□□ -0.17
LRP1-202ENST00000338962 ABCC4O15439 1325 aa14□□□□□ -0.17
LRP1-202ENST00000338962 KRT24Q2M2I5 525 aa13.99□□□□□ -0.17
LRP1-202ENST00000338962 PDZRN3Q9UPQ7 1066 aa13.99□□□□□ -0.17
LRP1-202ENST00000338962 SPG7Q9UQ90 795 aa13.99□□□□□ -0.17
LRP1-202ENST00000338962 NOP58Q9Y2X3 529 aaKnown RBP13.99□□□□□ -0.17
LRP1-202ENST00000338962 MIS18AQ9NYP9 233 aa13.98□□□□□ -0.17
LRP1-202ENST00000338962 MAP3K5Q99683 1374 aa13.98□□□□□ -0.17
LRP1-202ENST00000338962 THSD7AQ9UPZ6 1657 aa13.98□□□□□ -0.17
LRP1-202ENST00000338962 TNS2Q63HR2 1409 aa13.97□□□□□ -0.17
LRP1-202ENST00000338962 ZBTB7BO15156 539 aaPredicted RBP13.97□□□□□ -0.17
LRP1-202ENST00000338962 CYP27B1O15528 508 aa13.97□□□□□ -0.17
LRP1-202ENST00000338962 ZBTB47Q9UFB7 747 aaPredicted RBP13.96□□□□□ -0.17
LRP1-202ENST00000338962 PCDH11XQ9BZA7 1347 aa13.96□□□□□ -0.17
LRP1-202ENST00000338962 PCDH11YQ9BZA8 1340 aa13.96□□□□□ -0.17
LRP1-202ENST00000338962 LRRC37A3O60309 1634 aa13.96□□□□□ -0.17
LRP1-202ENST00000338962 A0A0G2JS52 829 aa13.96□□□□□ -0.18
LRP1-202ENST00000338962 NKX1-1Q15270 411 aaPredicted RBP13.96□□□□□ -0.18
LRP1-202ENST00000338962 RGS12O14924 1447 aa13.96□□□□□ -0.18
LRP1-202ENST00000338962 PHKG2P15735 406 aa13.95□□□□□ -0.18
LRP1-202ENST00000338962 SMC5Q8IY18 1101 aa13.95□□□□□ -0.18
LRP1-202ENST00000338962 IFNL2Q8IZJ0 200 aa13.95□□□□□ -0.18
LRP1-202ENST00000338962 MARCH10Q8NA82 808 aaPredicted RBP13.95□□□□□ -0.18
LRP1-202ENST00000338962 AKAP4Q5JQC9 854 aa13.95□□□□□ -0.18
LRP1-202ENST00000338962 KRT27Q7Z3Y8 459 aa13.95□□□□□ -0.18
LRP1-202ENST00000338962 PTPRCP08575 1304 aa13.94□□□□□ -0.18
LRP1-202ENST00000338962 PARP4Q9UKK3 1724 aaKnown RBP13.94□□□□□ -0.18
LRP1-202ENST00000338962 ZNF530Q6P9A1 599 aaPredicted RBP13.94□□□□□ -0.18
LRP1-202ENST00000338962 DDX54Q8TDD1 881 aaKnown RBP13.94□□□□□ -0.18
LRP1-202ENST00000338962 BCL9O00512 1426 aa13.94□□□□□ -0.18
LRP1-202ENST00000338962 IL17REQ8NFR9 667 aa13.93□□□□□ -0.18
LRP1-202ENST00000338962 SLC4A2P04920 1241 aa13.93□□□□□ -0.18
LRP1-202ENST00000338962 HSP90AB1P08238 724 aaKnown RBP13.92□□□□□ -0.18
LRP1-202ENST00000338962 TAF7Q15545 349 aaPredicted RBP13.92□□□□□ -0.18
LRP1-202ENST00000338962 C1orf141Q5JVX7 400 aa13.92□□□□□ -0.18
LRP1-202ENST00000338962 DDRGK1Q96HY6 314 aa13.92□□□□□ -0.18
LRP1-202ENST00000338962 C1orf115Q9H7X2 142 aa13.92□□□□□ -0.18
LRP1-202ENST00000338962 BABAM1Q9NWV8 329 aa13.92□□□□□ -0.18
LRP1-202ENST00000338962 PKD1L3Q7Z443 1732 aa13.92□□□□□ -0.18
LRP1-202ENST00000338962 INTS3Q68E01 1043 aaKnown RBP13.92□□□□□ -0.18
LRP1-202ENST00000338962 VIRMAQ69YN4 1812 aaKnown RBP13.92□□□□□ -0.18
LRP1-202ENST00000338962 WNK3Q9BYP7 1800 aa13.91□□□□□ -0.18
LRP1-202ENST00000338962 DCAF5Q96JK2 942 aa13.91□□□□□ -0.18
LRP1-202ENST00000338962 STK31Q9BXU1 1019 aa13.91□□□□□ -0.18
LRP1-202ENST00000338962 SOS1Q07889 1333 aaPredicted RBP13.9□□□□□ -0.18
LRP1-202ENST00000338962 FAM196AQ6ZSG2 479 aa13.9□□□□□ -0.18
LRP1-202ENST00000338962 GCC1Q96CN9 775 aa13.9□□□□□ -0.18
LRP1-202ENST00000338962 CEMIPQ8WUJ3 1361 aa13.89□□□□□ -0.19
LRP1-202ENST00000338962 NUCB1Q02818 461 aa13.89□□□□□ -0.19
LRP1-202ENST00000338962 CCDC30Q5VVM6 783 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms