RNA–Protein interactions for RNA: ENST00000338733.9

TBCCD1-201, Transcript of TBCC domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TBCCD1, Length 2,441 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TBCCD1-201ENST00000338733 AMIGO3Q86WK7 504 aa12.84□□□□□ -0.35
TBCCD1-201ENST00000338733 KDM6AO15550 1401 aaPredicted RBP12.84□□□□□ -0.35
TBCCD1-201ENST00000338733 PCDH11XQ9BZA7 1347 aa12.84□□□□□ -0.35
TBCCD1-201ENST00000338733 PCDH11YQ9BZA8 1340 aa12.84□□□□□ -0.35
TBCCD1-201ENST00000338733 FOXN1O15353 648 aa12.83□□□□□ -0.35
TBCCD1-201ENST00000338733 PHF14O94880 888 aa12.83□□□□□ -0.35
TBCCD1-201ENST00000338733 AIDAQ96BJ3 306 aa12.83□□□□□ -0.35
TBCCD1-201ENST00000338733 BRCA1P38398 1863 aaKnown RBP12.83□□□□□ -0.36
TBCCD1-201ENST00000338733 CD163L1Q9NR16 1453 aa12.83□□□□□ -0.36
TBCCD1-201ENST00000338733 EDC4Q6P2E9 1401 aaKnown RBP12.83□□□□□ -0.36
TBCCD1-201ENST00000338733 GLTPD2A6NH11 291 aa12.82□□□□□ -0.36
TBCCD1-201ENST00000338733 KCNA3P22001 575 aa12.82□□□□□ -0.36
TBCCD1-201ENST00000338733 DALRD3Q5D0E6 543 aaKnown RBP12.82□□□□□ -0.36
TBCCD1-201ENST00000338733 NME9Q86XW9 330 aa12.82□□□□□ -0.36
TBCCD1-201ENST00000338733 ABHD8Q96I13 439 aa12.82□□□□□ -0.36
TBCCD1-201ENST00000338733 TMF1P82094 1093 aa12.82□□□□□ -0.36
TBCCD1-201ENST00000338733 RTL1A6NKG5 1358 aa12.82□□□□□ -0.36
TBCCD1-201ENST00000338733 N4BP2Q86UW6 1770 aaPredicted RBP12.81□□□□□ -0.36
TBCCD1-201ENST00000338733 MAP3K19Q56UN5 1328 aa12.81□□□□□ -0.36
TBCCD1-201ENST00000338733 CNTNAP1P78357 1384 aa12.81□□□□□ -0.36
TBCCD1-201ENST00000338733 C4AP0C0L4 1744 aa12.8□□□□□ -0.36
TBCCD1-201ENST00000338733 TRIM26Q12899 539 aaPredicted RBP12.8□□□□□ -0.36
TBCCD1-201ENST00000338733 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.8□□□□□ -0.36
TBCCD1-201ENST00000338733 RAPGEF4Q8WZA2 1011 aa12.8□□□□□ -0.36
TBCCD1-201ENST00000338733 LOC102724428A0A0B4J2F2 783 aa12.8□□□□□ -0.36
TBCCD1-201ENST00000338733 TATP17735 454 aaPredicted RBP12.8□□□□□ -0.36
TBCCD1-201ENST00000338733 HOXC9P31274 260 aa12.8□□□□□ -0.36
TBCCD1-201ENST00000338733 SIK1P57059 783 aa12.8□□□□□ -0.36
TBCCD1-201ENST00000338733 HDGFL2Q7Z4V5 671 aaPredicted RBP12.8□□□□□ -0.36
TBCCD1-201ENST00000338733 LINC00116Q8NCU8 138 aa12.8□□□□□ -0.36
TBCCD1-201ENST00000338733 PARP3Q9Y6F1 533 aa12.8□□□□□ -0.36
TBCCD1-201ENST00000338733 RAB3GAP2Q9H2M9 1393 aa12.79□□□□□ -0.36
TBCCD1-201ENST00000338733 GNPATO15228 680 aa12.79□□□□□ -0.36
TBCCD1-201ENST00000338733 NKX1-1Q15270 411 aaPredicted RBP12.79□□□□□ -0.36
TBCCD1-201ENST00000338733 MPRIPQ6WCQ1 1025 aa12.79□□□□□ -0.36
TBCCD1-201ENST00000338733 MAP2P11137 1827 aaKnown RBP12.78□□□□□ -0.36
TBCCD1-201ENST00000338733 TRAPPC3LQ5T215 181 aa12.78□□□□□ -0.36
TBCCD1-201ENST00000338733 LTV1Q96GA3 475 aaPredicted RBP12.78□□□□□ -0.36
TBCCD1-201ENST00000338733 RC3H1Q5TC82 1133 aaKnown RBP12.78□□□□□ -0.36
TBCCD1-201ENST00000338733 SMG6Q86US8 1419 aaKnown RBP12.77□□□□□ -0.36
TBCCD1-201ENST00000338733 LMNB1P20700 586 aa12.77□□□□□ -0.37
TBCCD1-201ENST00000338733 WBP1LQ9NX94 342 aa12.77□□□□□ -0.37
TBCCD1-201ENST00000338733 PUS7Q96PZ0 661 aaKnown RBP12.77□□□□□ -0.37
TBCCD1-201ENST00000338733 RTCBQ9Y3I0 505 aaKnown RBP12.77□□□□□ -0.37
TBCCD1-201ENST00000338733 CHADLQ6NUI6 762 aa12.76□□□□□ -0.37
TBCCD1-201ENST00000338733 PIGBQ92521 554 aa12.76□□□□□ -0.37
TBCCD1-201ENST00000338733 ZNF831Q5JPB2 1677 aa12.75□□□□□ -0.37
TBCCD1-201ENST00000338733 AMPHP49418 695 aa12.75□□□□□ -0.37
TBCCD1-201ENST00000338733 FKBP8Q14318 412 aa12.75□□□□□ -0.37
TBCCD1-201ENST00000338733 TERF2IPQ9NYB0 399 aa12.75□□□□□ -0.37
TBCCD1-201ENST00000338733 GYS1P13807 737 aa12.74□□□□□ -0.37
TBCCD1-201ENST00000338733 NBPF6Q5VWK0 638 aa12.74□□□□□ -0.37
TBCCD1-201ENST00000338733 NBPF4Q96M43 638 aa12.74□□□□□ -0.37
TBCCD1-201ENST00000338733 MKRN1Q9UHC7 482 aaKnown RBP12.74□□□□□ -0.37
TBCCD1-201ENST00000338733 SBF1O95248 1867 aa12.74□□□□□ -0.37
TBCCD1-201ENST00000338733 HSPA8P11142 646 aaKnown RBP12.73□□□□□ -0.37
TBCCD1-201ENST00000338733 ITPK1Q13572 414 aa12.73□□□□□ -0.37
TBCCD1-201ENST00000338733 SMIM5Q71RC9 77 aa12.73□□□□□ -0.37
TBCCD1-201ENST00000338733 CNTNAP4Q9C0A0 1308 aa12.73□□□□□ -0.37
TBCCD1-201ENST00000338733 POTECB2RU33 542 aa12.73□□□□□ -0.37
TBCCD1-201ENST00000338733 CYP27B1O15528 508 aa12.73□□□□□ -0.37
TBCCD1-201ENST00000338733 LBX1P52954 281 aa12.73□□□□□ -0.37
TBCCD1-201ENST00000338733 DPY19L2Q6NUT2 758 aa12.73□□□□□ -0.37
TBCCD1-201ENST00000338733 KIF24Q5T7B8 1368 aa12.72□□□□□ -0.37
TBCCD1-201ENST00000338733 ATP6V1AP38606 617 aa12.72□□□□□ -0.37
TBCCD1-201ENST00000338733 ITGB4P16144 1822 aa12.72□□□□□ -0.37
TBCCD1-201ENST00000338733 RPS6KA4O75676 772 aa12.72□□□□□ -0.37
TBCCD1-201ENST00000338733 ARHGEF1Q92888 912 aaKnown RBP12.72□□□□□ -0.37
TBCCD1-201ENST00000338733 COG3Q96JB2 828 aa12.72□□□□□ -0.37
TBCCD1-201ENST00000338733 PASKQ96RG2 1323 aa12.71□□□□□ -0.37
TBCCD1-201ENST00000338733 MAP2K1Q02750 393 aaPredicted RBP12.71□□□□□ -0.37
TBCCD1-201ENST00000338733 KDRP35968 1356 aa12.71□□□□□ -0.37
TBCCD1-201ENST00000338733 RFC4P35249 363 aa12.71□□□□□ -0.38
TBCCD1-201ENST00000338733 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.7□□□□□ -0.38
TBCCD1-201ENST00000338733 TMOD3Q9NYL9 352 aa12.7□□□□□ -0.38
TBCCD1-201ENST00000338733 VEGFBP49765 207 aa12.7□□□□□ -0.38
TBCCD1-201ENST00000338733 INSRP06213 1382 aa12.7□□□□□ -0.38
TBCCD1-201ENST00000338733 NCAPD2Q15021 1401 aa12.69□□□□□ -0.38
TBCCD1-201ENST00000338733 VIRMAQ69YN4 1812 aaKnown RBP12.69□□□□□ -0.38
TBCCD1-201ENST00000338733 TMEM88BA6NKF7 163 aa12.69□□□□□ -0.38
TBCCD1-201ENST00000338733 SPG7Q9UQ90 795 aa12.69□□□□□ -0.38
TBCCD1-201ENST00000338733 RGPD2P0DJD1 1756 aa12.69□□□□□ -0.38
TBCCD1-201ENST00000338733 A0A1W2PP64 1363 aa12.69□□□□□ -0.38
TBCCD1-201ENST00000338733 CCDC85CA6NKD9 419 aa12.68□□□□□ -0.38
TBCCD1-201ENST00000338733 RASSF7Q02833 373 aa12.68□□□□□ -0.38
TBCCD1-201ENST00000338733 RASSF10A6NK89 507 aa12.67□□□□□ -0.38
TBCCD1-201ENST00000338733 LDHDQ86WU2 507 aa12.67□□□□□ -0.38
TBCCD1-201ENST00000338733 ATG3Q9NT62 314 aa12.67□□□□□ -0.38
TBCCD1-201ENST00000338733 ASAP1Q9ULH1 1129 aa12.67□□□□□ -0.38
TBCCD1-201ENST00000338733 TIAM2Q8IVF5 1701 aa12.67□□□□□ -0.38
TBCCD1-201ENST00000338733 TMC1Q8TDI8 760 aa12.66□□□□□ -0.38
TBCCD1-201ENST00000338733 USHBP1Q8N6Y0 703 aa12.66□□□□□ -0.38
TBCCD1-201ENST00000338733 SLC12A5Q9H2X9 1139 aa12.66□□□□□ -0.38
TBCCD1-201ENST00000338733 IQCA1LA6NCM1 817 aa12.65□□□□□ -0.38
TBCCD1-201ENST00000338733 TM4SF1P30408 202 aa12.65□□□□□ -0.38
TBCCD1-201ENST00000338733 CHRNA5P30532 468 aa12.65□□□□□ -0.38
TBCCD1-201ENST00000338733 PDZRN3Q9UPQ7 1066 aa12.65□□□□□ -0.38
TBCCD1-201ENST00000338733 ROCK2O75116 1388 aaKnown RBP12.65□□□□□ -0.38
TBCCD1-201ENST00000338733 DDR1Q08345 913 aa12.64□□□□□ -0.39
TBCCD1-201ENST00000338733 USP42Q9H9J4 1324 aaKnown RBP12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms