RNA–Protein interactions for RNA: ENST00000338427.10

NUDCD3-201, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-201ENST00000338427 ERVV-2B6SEH9 535 aa18.19■□□□□ 0.5
NUDCD3-201ENST00000338427 CABP4P57796 275 aa18.19■□□□□ 0.5
NUDCD3-201ENST00000338427 NFATC2IPQ8NCF5 419 aa18.19■□□□□ 0.5
NUDCD3-201ENST00000338427 DCAF5Q96JK2 942 aa18.19■□□□□ 0.5
NUDCD3-201ENST00000338427 UTRNP46939 3433 aa18.19■□□□□ 0.5
NUDCD3-201ENST00000338427 C5P01031 1676 aa18.18■□□□□ 0.5
NUDCD3-201ENST00000338427 AMOTQ4VCS5 1084 aa18.18■□□□□ 0.5
NUDCD3-201ENST00000338427 FLAD1Q8NFF5 587 aa18.18■□□□□ 0.5
NUDCD3-201ENST00000338427 LGR6Q9HBX8 967 aa18.18■□□□□ 0.5
NUDCD3-201ENST00000338427 KDM6AO15550 1401 aaPredicted RBP18.17■□□□□ 0.5
NUDCD3-201ENST00000338427 GNPATO15228 680 aa18.17■□□□□ 0.5
NUDCD3-201ENST00000338427 C4BP0C0L5 1744 aa18.17■□□□□ 0.5
NUDCD3-201ENST00000338427 COL24A1Q17RW2 1714 aa18.17■□□□□ 0.5
NUDCD3-201ENST00000338427 MAP3K5Q99683 1374 aa18.17■□□□□ 0.5
NUDCD3-201ENST00000338427 PTCD1O75127 700 aaKnown RBP18.16■□□□□ 0.5
NUDCD3-201ENST00000338427 HSP90AB1P08238 724 aaKnown RBP18.16■□□□□ 0.5
NUDCD3-201ENST00000338427 YBX3P16989 372 aaKnown RBP eCLIP18.15■□□□□ 0.5
NUDCD3-201ENST00000338427 C1orf141Q5JVX7 400 aa18.15■□□□□ 0.5
NUDCD3-201ENST00000338427 WWC3Q9ULE0 1092 aa18.15■□□□□ 0.5
NUDCD3-201ENST00000338427 DIAPH1O60610 1272 aaKnown RBP18.13■□□□□ 0.49
NUDCD3-201ENST00000338427 SSFA2P28290 1259 aa18.12■□□□□ 0.49
NUDCD3-201ENST00000338427 MTHFSDQ2M296 383 aaKnown RBP18.12■□□□□ 0.49
NUDCD3-201ENST00000338427 ZNF784Q8NCA9 323 aaPredicted RBP18.12■□□□□ 0.49
NUDCD3-201ENST00000338427 KDRP35968 1356 aa18.12■□□□□ 0.49
NUDCD3-201ENST00000338427 UBR3Q6ZT12 1888 aa18.12■□□□□ 0.49
NUDCD3-201ENST00000338427 ARHGEF1Q92888 912 aaKnown RBP18.11■□□□□ 0.49
NUDCD3-201ENST00000338427 HMGB2P26583 209 aaKnown RBP18.1■□□□□ 0.49
NUDCD3-201ENST00000338427 SLC39A6Q13433 755 aa18.1■□□□□ 0.49
NUDCD3-201ENST00000338427 AKAP4Q5JQC9 854 aa18.1■□□□□ 0.49
NUDCD3-201ENST00000338427 TRAPPC3LQ5T215 181 aa18.1■□□□□ 0.49
NUDCD3-201ENST00000338427 U2SURPO15042 1029 aaKnown RBP18.09■□□□□ 0.49
NUDCD3-201ENST00000338427 RNMTO43148 476 aaKnown RBP18.09■□□□□ 0.49
NUDCD3-201ENST00000338427 RTCBQ9Y3I0 505 aaKnown RBP18.09■□□□□ 0.49
NUDCD3-201ENST00000338427 CD2APQ9Y5K6 639 aa18.09■□□□□ 0.49
NUDCD3-201ENST00000338427 RPS6KA4O75676 772 aa18.08■□□□□ 0.48
NUDCD3-201ENST00000338427 RC3H1Q5TC82 1133 aaKnown RBP18.08■□□□□ 0.48
NUDCD3-201ENST00000338427 GOLGB1Q14789 3259 aaKnown RBP18.07■□□□□ 0.48
NUDCD3-201ENST00000338427 MMP10P09238 476 aa18.07■□□□□ 0.48
NUDCD3-201ENST00000338427 PLEKHG2Q9H7P9 1386 aa18.06■□□□□ 0.48
NUDCD3-201ENST00000338427 DNAJC10Q8IXB1 793 aa18.06■□□□□ 0.48
NUDCD3-201ENST00000338427 SLC52A2Q9HAB3 445 aa18.06■□□□□ 0.48
NUDCD3-201ENST00000338427 SRP68Q9UHB9 627 aaKnown RBP18.06■□□□□ 0.48
NUDCD3-201ENST00000338427 CRKLP46109 303 aaKnown RBP18.05■□□□□ 0.48
NUDCD3-201ENST00000338427 INTS5Q6P9B9 1019 aaKnown RBP18.05■□□□□ 0.48
NUDCD3-201ENST00000338427 MYH14Q7Z406 1995 aaKnown RBP18.04■□□□□ 0.48
NUDCD3-201ENST00000338427 RFC4P35249 363 aa18.04■□□□□ 0.48
NUDCD3-201ENST00000338427 CNTNAP4Q9C0A0 1308 aa18.03■□□□□ 0.48
NUDCD3-201ENST00000338427 GYS1P13807 737 aa18.03■□□□□ 0.48
NUDCD3-201ENST00000338427 IL17REQ8NFR9 667 aa18.03■□□□□ 0.48
NUDCD3-201ENST00000338427 PHACTR3Q96KR7 559 aa18.03■□□□□ 0.48
NUDCD3-201ENST00000338427 CHD4Q14839 1912 aa18.03■□□□□ 0.48
NUDCD3-201ENST00000338427 NPC1L1Q9UHC9 1359 aa18.03■□□□□ 0.48
NUDCD3-201ENST00000338427 A0A0G2JLW4 131 aa18.01■□□□□ 0.47
NUDCD3-201ENST00000338427 GRIN3BO60391 1043 aa18.01■□□□□ 0.47
NUDCD3-201ENST00000338427 NLGN1Q8N2Q7 840 aa18.01■□□□□ 0.47
NUDCD3-201ENST00000338427 SCN11AQ9UI33 1791 aa18.01■□□□□ 0.47
NUDCD3-201ENST00000338427 COL3A1P02461 1466 aaPredicted RBP18.01■□□□□ 0.47
NUDCD3-201ENST00000338427 PPP2R1AP30153 589 aa18■□□□□ 0.47
NUDCD3-201ENST00000338427 FKBP8Q14318 412 aa18■□□□□ 0.47
NUDCD3-201ENST00000338427 CYP19A1P11511 503 aaPredicted RBP17.99■□□□□ 0.47
NUDCD3-201ENST00000338427 ADRA2BP18089 450 aa17.98■□□□□ 0.47
NUDCD3-201ENST00000338427 COL5A3P25940 1745 aaPredicted RBP17.98■□□□□ 0.47
NUDCD3-201ENST00000338427 KCNQ3O43525 872 aa17.97■□□□□ 0.47
NUDCD3-201ENST00000338427 PRKAR2BP31323 418 aa17.97■□□□□ 0.47
NUDCD3-201ENST00000338427 CCDC87Q9NVE4 849 aa17.97■□□□□ 0.47
NUDCD3-201ENST00000338427 GNAT3A8MTJ3 354 aa17.96■□□□□ 0.47
NUDCD3-201ENST00000338427 DPEP1P16444 411 aa17.96■□□□□ 0.47
NUDCD3-201ENST00000338427 DDR1Q08345 913 aa17.96■□□□□ 0.47
NUDCD3-201ENST00000338427 USPL1Q5W0Q7 1092 aa17.96■□□□□ 0.47
NUDCD3-201ENST00000338427 RSPH6AQ9H0K4 717 aa17.96■□□□□ 0.47
NUDCD3-201ENST00000338427 PARP3Q9Y6F1 533 aa17.96■□□□□ 0.47
NUDCD3-201ENST00000338427 U2AF1L5P0DN76 240 aaPredicted RBP17.95■□□□□ 0.46
NUDCD3-201ENST00000338427 CANXP27824 592 aaKnown RBP17.95■□□□□ 0.46
NUDCD3-201ENST00000338427 U2AF1Q01081 240 aaKnown RBP eCLIP17.95■□□□□ 0.46
NUDCD3-201ENST00000338427 CFAP53Q96M91 514 aa17.95■□□□□ 0.46
NUDCD3-201ENST00000338427 ZBTB1Q9Y2K1 713 aa17.95■□□□□ 0.46
NUDCD3-201ENST00000338427 ZNF831Q5JPB2 1677 aa17.95■□□□□ 0.46
NUDCD3-201ENST00000338427 TJP1Q07157 1748 aa17.95■□□□□ 0.46
NUDCD3-201ENST00000338427 TM4SF1P30408 202 aa17.94■□□□□ 0.46
NUDCD3-201ENST00000338427 GAS2L2Q8NHY3 880 aa17.94■□□□□ 0.46
NUDCD3-201ENST00000338427 ZNF496Q96IT1 587 aaPredicted RBP17.94■□□□□ 0.46
NUDCD3-201ENST00000338427 USP42Q9H9J4 1324 aaKnown RBP17.94■□□□□ 0.46
NUDCD3-201ENST00000338427 VIRMAQ69YN4 1812 aaKnown RBP17.93■□□□□ 0.46
NUDCD3-201ENST00000338427 KCNA3P22001 575 aa17.93■□□□□ 0.46
NUDCD3-201ENST00000338427 TEFQ10587 303 aa17.93■□□□□ 0.46
NUDCD3-201ENST00000338427 CICQ96RK0 1608 aaPredicted RBP17.93■□□□□ 0.46
NUDCD3-201ENST00000338427 SOS1Q07889 1333 aaPredicted RBP17.93■□□□□ 0.46
NUDCD3-201ENST00000338427 TGFB2P61812 414 aa17.92■□□□□ 0.46
NUDCD3-201ENST00000338427 DCTN1Q14203 1278 aa17.92■□□□□ 0.46
NUDCD3-201ENST00000338427 ZNF526Q8TF50 670 aaPredicted RBP17.92■□□□□ 0.46
NUDCD3-201ENST00000338427 BCL2L12Q9HB09 334 aa17.92■□□□□ 0.46
NUDCD3-201ENST00000338427 BCS1LQ9Y276 419 aa17.92■□□□□ 0.46
NUDCD3-201ENST00000338427 KCPQ6ZWJ8 1503 aa17.92■□□□□ 0.46
NUDCD3-201ENST00000338427 ZPR1O75312 459 aa17.91■□□□□ 0.46
NUDCD3-201ENST00000338427 C1QTNF8P60827 252 aa17.91■□□□□ 0.46
NUDCD3-201ENST00000338427 ZNF790Q6PG37 636 aa17.91■□□□□ 0.46
NUDCD3-201ENST00000338427 NUDCQ9Y266 331 aa17.91■□□□□ 0.46
NUDCD3-201ENST00000338427 N4BP2Q86UW6 1770 aaPredicted RBP17.91■□□□□ 0.46
NUDCD3-201ENST00000338427 PXDNLA1KZ92 1463 aa17.9■□□□□ 0.46
NUDCD3-201ENST00000338427 MRC1P22897 1456 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms