RNA–Protein interactions for RNA: ENST00000338372.6

VSTM1-201, Transcript of V-set and transmembrane domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VSTM1, Length 1,023 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM1-201ENST00000338372 SCN11AQ9UI33 1791 aa23.32■■□□□ 1.32
VSTM1-201ENST00000338372 HMGB2P26583 209 aaKnown RBP23.32■■□□□ 1.32
VSTM1-201ENST00000338372 PLEKHO1Q53GL0 409 aaPredicted RBP23.32■■□□□ 1.32
VSTM1-201ENST00000338372 DCAF5Q96JK2 942 aa23.31■■□□□ 1.32
VSTM1-201ENST00000338372 MSH5O43196 834 aa23.3■■□□□ 1.32
VSTM1-201ENST00000338372 AMOTQ4VCS5 1084 aa23.3■■□□□ 1.32
VSTM1-201ENST00000338372 VIRMAQ69YN4 1812 aaKnown RBP23.3■■□□□ 1.32
VSTM1-201ENST00000338372 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.29■■□□□ 1.32
VSTM1-201ENST00000338372 SULT6B1Q6IMI4 303 aa23.29■■□□□ 1.32
VSTM1-201ENST00000338372 ZNF530Q6P9A1 599 aaPredicted RBP23.29■■□□□ 1.32
VSTM1-201ENST00000338372 SSFA2P28290 1259 aa23.28■■□□□ 1.32
VSTM1-201ENST00000338372 ATP6V1AP38606 617 aa23.28■■□□□ 1.32
VSTM1-201ENST00000338372 MTHFSP49914 203 aa23.28■■□□□ 1.32
VSTM1-201ENST00000338372 AK7Q96M32 723 aa23.28■■□□□ 1.32
VSTM1-201ENST00000338372 HSP90AB1P08238 724 aaKnown RBP23.27■■□□□ 1.32
VSTM1-201ENST00000338372 ZNF784Q8NCA9 323 aaPredicted RBP23.27■■□□□ 1.32
VSTM1-201ENST00000338372 CICQ96RK0 1608 aaPredicted RBP23.26■■□□□ 1.31
VSTM1-201ENST00000338372 NPC1L1Q9UHC9 1359 aa23.26■■□□□ 1.31
VSTM1-201ENST00000338372 ADAMTS7Q9UKP4 1686 aa23.25■■□□□ 1.31
VSTM1-201ENST00000338372 YBX3P16989 372 aaKnown RBP eCLIP23.25■■□□□ 1.31
VSTM1-201ENST00000338372 KLHL34Q8N239 644 aa23.25■■□□□ 1.31
VSTM1-201ENST00000338372 PHF14O94880 888 aa23.24■■□□□ 1.31
VSTM1-201ENST00000338372 GPR162Q16538 588 aa23.24■■□□□ 1.31
VSTM1-201ENST00000338372 CD2APQ9Y5K6 639 aa23.24■■□□□ 1.31
VSTM1-201ENST00000338372 COL3A1P02461 1466 aaPredicted RBP23.24■■□□□ 1.31
VSTM1-201ENST00000338372 TJP1Q07157 1748 aa23.23■■□□□ 1.31
VSTM1-201ENST00000338372 GNPATO15228 680 aa23.22■■□□□ 1.31
VSTM1-201ENST00000338372 RC3H1Q5TC82 1133 aaKnown RBP23.22■■□□□ 1.31
VSTM1-201ENST00000338372 NFATC2IPQ8NCF5 419 aa23.22■■□□□ 1.31
VSTM1-201ENST00000338372 KIF13BQ9NQT8 1826 aa23.22■■□□□ 1.31
VSTM1-201ENST00000338372 CABP4P57796 275 aa23.21■■□□□ 1.31
VSTM1-201ENST00000338372 CC2D1BQ5T0F9 858 aaKnown RBP23.21■■□□□ 1.31
VSTM1-201ENST00000338372 KIAA1551Q9HCM1 1747 aa23.21■■□□□ 1.31
VSTM1-201ENST00000338372 C4AP0C0L4 1744 aa23.2■■□□□ 1.3
VSTM1-201ENST00000338372 MRC1P22897 1456 aa23.19■■□□□ 1.3
VSTM1-201ENST00000338372 CNTNAP4Q9C0A0 1308 aa23.19■■□□□ 1.3
VSTM1-201ENST00000338372 LGR6Q9HBX8 967 aa23.19■■□□□ 1.3
VSTM1-201ENST00000338372 AKAP4Q5JQC9 854 aa23.18■■□□□ 1.3
VSTM1-201ENST00000338372 C1orf141Q5JVX7 400 aa23.18■■□□□ 1.3
VSTM1-201ENST00000338372 RBM42Q9BTD8 480 aaKnown RBP23.18■■□□□ 1.3
VSTM1-201ENST00000338372 HMOX1P09601 288 aa23.17■■□□□ 1.3
VSTM1-201ENST00000338372 RPS6KA4O75676 772 aa23.16■■□□□ 1.3
VSTM1-201ENST00000338372 ARHGEF1Q92888 912 aaKnown RBP23.16■■□□□ 1.3
VSTM1-201ENST00000338372 DIAPH1O60610 1272 aaKnown RBP23.15■■□□□ 1.3
VSTM1-201ENST00000338372 MTHFSDQ2M296 383 aaKnown RBP23.15■■□□□ 1.3
VSTM1-201ENST00000338372 RNMTO43148 476 aaKnown RBP23.14■■□□□ 1.29
VSTM1-201ENST00000338372 SLC52A2Q9HAB3 445 aa23.14■■□□□ 1.29
VSTM1-201ENST00000338372 RTCBQ9Y3I0 505 aaKnown RBP23.14■■□□□ 1.29
VSTM1-201ENST00000338372 PTCD1O75127 700 aaKnown RBP23.13■■□□□ 1.29
VSTM1-201ENST00000338372 ADRA2BP18089 450 aa23.13■■□□□ 1.29
VSTM1-201ENST00000338372 TRAPPC3LQ5T215 181 aa23.13■■□□□ 1.29
VSTM1-201ENST00000338372 PELP1Q8IZL8 1130 aaKnown RBP23.13■■□□□ 1.29
VSTM1-201ENST00000338372 UBR2Q8IWV8 1755 aa23.12■■□□□ 1.29
VSTM1-201ENST00000338372 GRIN3BO60391 1043 aa23.12■■□□□ 1.29
VSTM1-201ENST00000338372 GYS1P13807 737 aa23.12■■□□□ 1.29
VSTM1-201ENST00000338372 KCPQ6ZWJ8 1503 aa23.12■■□□□ 1.29
VSTM1-201ENST00000338372 MMP10P09238 476 aa23.11■■□□□ 1.29
VSTM1-201ENST00000338372 SIPA1L3O60292 1781 aaPredicted RBP23.11■■□□□ 1.29
VSTM1-201ENST00000338372 N4BP2Q86UW6 1770 aaPredicted RBP23.11■■□□□ 1.29
VSTM1-201ENST00000338372 CRKLP46109 303 aaKnown RBP23.1■■□□□ 1.29
VSTM1-201ENST00000338372 INTS5Q6P9B9 1019 aaKnown RBP23.1■■□□□ 1.29
VSTM1-201ENST00000338372 BRCA1P38398 1863 aaKnown RBP23.09■■□□□ 1.29
VSTM1-201ENST00000338372 NLGN1Q8N2Q7 840 aa23.08■■□□□ 1.29
VSTM1-201ENST00000338372 PXDNLA1KZ92 1463 aa23.07■■□□□ 1.28
VSTM1-201ENST00000338372 SLC39A6Q13433 755 aa23.07■■□□□ 1.28
VSTM1-201ENST00000338372 C10orf71Q711Q0 1435 aa23.07■■□□□ 1.28
VSTM1-201ENST00000338372 DNAJC10Q8IXB1 793 aa23.06■■□□□ 1.28
VSTM1-201ENST00000338372 CYP19A1P11511 503 aaPredicted RBP23.04■■□□□ 1.28
VSTM1-201ENST00000338372 IL17REQ8NFR9 667 aa23.04■■□□□ 1.28
VSTM1-201ENST00000338372 SRP68Q9UHB9 627 aaKnown RBP23.04■■□□□ 1.28
VSTM1-201ENST00000338372 USP42Q9H9J4 1324 aaKnown RBP23.04■■□□□ 1.28
VSTM1-201ENST00000338372 ADCY9O60503 1353 aa23.03■■□□□ 1.28
VSTM1-201ENST00000338372 RFC4P35249 363 aa23.03■■□□□ 1.28
VSTM1-201ENST00000338372 CNGB1Q14028 1251 aaPredicted RBP23.02■■□□□ 1.28
VSTM1-201ENST00000338372 FKBP8Q14318 412 aa23.02■■□□□ 1.28
VSTM1-201ENST00000338372 KCNA3P22001 575 aa23.01■■□□□ 1.27
VSTM1-201ENST00000338372 TGFB2P61812 414 aa23.01■■□□□ 1.27
VSTM1-201ENST00000338372 PHACTR3Q96KR7 559 aa23.01■■□□□ 1.27
VSTM1-201ENST00000338372 SOS1Q07889 1333 aaPredicted RBP23.01■■□□□ 1.27
VSTM1-201ENST00000338372 TM4SF1P30408 202 aa23■■□□□ 1.27
VSTM1-201ENST00000338372 DDR1Q08345 913 aa23■■□□□ 1.27
VSTM1-201ENST00000338372 VSIG10Q8N0Z9 540 aa23■■□□□ 1.27
VSTM1-201ENST00000338372 RSPH6AQ9H0K4 717 aa23■■□□□ 1.27
VSTM1-201ENST00000338372 CCDC87Q9NVE4 849 aa23■■□□□ 1.27
VSTM1-201ENST00000338372 WWC3Q9ULE0 1092 aa23■■□□□ 1.27
VSTM1-201ENST00000338372 AFDNP55196 1824 aaKnown RBP22.99■■□□□ 1.27
VSTM1-201ENST00000338372 U2SURPO15042 1029 aaKnown RBP22.99■■□□□ 1.27
VSTM1-201ENST00000338372 CEMIPQ8WUJ3 1361 aa22.99■■□□□ 1.27
VSTM1-201ENST00000338372 A0A0G2JLW4 131 aa22.98■■□□□ 1.27
VSTM1-201ENST00000338372 PPP2R1AP30153 589 aa22.98■■□□□ 1.27
VSTM1-201ENST00000338372 C1QTNF8P60827 252 aa22.98■■□□□ 1.27
VSTM1-201ENST00000338372 NRXN2Q9P2S2 1712 aa22.98■■□□□ 1.27
VSTM1-201ENST00000338372 ARFGEF1Q9Y6D6 1849 aa22.97■■□□□ 1.27
VSTM1-201ENST00000338372 ATP10DQ9P241 1426 aa22.97■■□□□ 1.27
VSTM1-201ENST00000338372 GNAT3A8MTJ3 354 aa22.96■■□□□ 1.27
VSTM1-201ENST00000338372 DPEP1P16444 411 aa22.96■■□□□ 1.27
VSTM1-201ENST00000338372 BCL2L12Q9HB09 334 aa22.96■■□□□ 1.27
VSTM1-201ENST00000338372 ZBTB1Q9Y2K1 713 aa22.96■■□□□ 1.27
VSTM1-201ENST00000338372 POLRMTO00411 1230 aaKnown RBP22.95■■□□□ 1.26
VSTM1-201ENST00000338372 GAS2L2Q8NHY3 880 aa22.95■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms