RNA–Protein interactions for RNA: ENST00000337273.9

TNPO1-201, Transcript of transportin 1, humanhuman

TSL 1 (best) BASIC

Gene TNPO1, Length 11,183 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO1-201ENST00000337273 SLC4A2P04920 1241 aa9.38□□□□□ -0.91
TNPO1-201ENST00000337273 CCDC91Q7Z6B0 441 aa9.38□□□□□ -0.91
TNPO1-201ENST00000337273 DNAI2Q9GZS0 605 aa9.38□□□□□ -0.91
TNPO1-201ENST00000337273 PHAXQ9H814 394 aaKnown RBP9.38□□□□□ -0.91
TNPO1-201ENST00000337273 ZNF287Q9HBT7 754 aa9.38□□□□□ -0.91
TNPO1-201ENST00000337273 ARHGAP5Q13017 1502 aa9.37□□□□□ -0.91
TNPO1-201ENST00000337273 TAF4BQ92750 862 aa9.37□□□□□ -0.91
TNPO1-201ENST00000337273 ERBINQ96RT1 1412 aa9.37□□□□□ -0.91
TNPO1-201ENST00000337273 RRAGDQ9NQL2 400 aaPredicted RBP9.37□□□□□ -0.91
TNPO1-201ENST00000337273 FGFR1OPO95684 399 aaKnown RBP9.37□□□□□ -0.91
TNPO1-201ENST00000337273 DYDC1Q8WWB3 177 aa9.37□□□□□ -0.91
TNPO1-201ENST00000337273 HECW1Q76N89 1606 aa9.37□□□□□ -0.91
TNPO1-201ENST00000337273 GPIHBP1Q8IV16 184 aa9.37□□□□□ -0.91
TNPO1-201ENST00000337273 TRIM21P19474 475 aaKnown RBP9.37□□□□□ -0.91
TNPO1-201ENST00000337273 CCDC196A0A1B0GTZ2 297 aa9.37□□□□□ -0.91
TNPO1-201ENST00000337273 SF3A3Q12874 501 aaKnown RBP eCLIP9.37□□□□□ -0.91
TNPO1-201ENST00000337273 NKTRP30414 1462 aaKnown RBP9.37□□□□□ -0.91
TNPO1-201ENST00000337273 GCOM1H8Y6P7 765 aaPredicted RBP9.37□□□□□ -0.91
TNPO1-201ENST00000337273 MYZAPP0CAP1 466 aa9.37□□□□□ -0.91
TNPO1-201ENST00000337273 AIMP1Q12904 312 aaKnown RBP9.37□□□□□ -0.91
TNPO1-201ENST00000337273 TANGO6Q9C0B7 1094 aa9.36□□□□□ -0.91
TNPO1-201ENST00000337273 DYNC1I1O14576 645 aa9.36□□□□□ -0.91
TNPO1-201ENST00000337273 CASQ1P31415 396 aa9.36□□□□□ -0.91
TNPO1-201ENST00000337273 ZSWIM4Q9H7M6 989 aa9.36□□□□□ -0.91
TNPO1-201ENST00000337273 HDGFL1Q5TGJ6 251 aa9.36□□□□□ -0.91
TNPO1-201ENST00000337273 KIAA1328Q86T90 577 aa9.36□□□□□ -0.91
TNPO1-201ENST00000337273 CNKSR2Q8WXI2 1034 aa9.36□□□□□ -0.91
TNPO1-201ENST00000337273 THUMPD2Q9BTF0 503 aaKnown RBP9.36□□□□□ -0.91
TNPO1-201ENST00000337273 DDX19AQ9NUU7 478 aaKnown RBP9.36□□□□□ -0.91
TNPO1-201ENST00000337273 ANKRD30BQ9BXX2 1392 aa9.36□□□□□ -0.91
TNPO1-201ENST00000337273 POTEJP0CG39 1038 aa9.36□□□□□ -0.91
TNPO1-201ENST00000337273 SPA17Q15506 151 aa9.36□□□□□ -0.91
TNPO1-201ENST00000337273 FERMT3Q86UX7 667 aa9.36□□□□□ -0.91
TNPO1-201ENST00000337273 GLRX3O76003 335 aaKnown RBP9.35□□□□□ -0.91
TNPO1-201ENST00000337273 NAA15Q9BXJ9 866 aaKnown RBP9.35□□□□□ -0.91
TNPO1-201ENST00000337273 VPS36Q86VN1 386 aa9.35□□□□□ -0.91
TNPO1-201ENST00000337273 CNNM1Q9NRU3 951 aa9.35□□□□□ -0.91
TNPO1-201ENST00000337273 IKQ13123 557 aaPredicted RBP9.35□□□□□ -0.91
TNPO1-201ENST00000337273 SLFN5Q08AF3 891 aa9.35□□□□□ -0.91
TNPO1-201ENST00000337273 ATF3P18847 181 aa9.35□□□□□ -0.91
TNPO1-201ENST00000337273 CFAP100Q494V2 611 aa9.35□□□□□ -0.91
TNPO1-201ENST00000337273 MAP2K1Q02750 393 aaPredicted RBP9.35□□□□□ -0.91
TNPO1-201ENST00000337273 KIF1BPQ96EK5 621 aa9.35□□□□□ -0.91
TNPO1-201ENST00000337273 USO1O60763 962 aaKnown RBP9.35□□□□□ -0.91
TNPO1-201ENST00000337273 NLRP6P59044 892 aa9.35□□□□□ -0.91
TNPO1-201ENST00000337273 DDX12PQ92771 950 aa9.35□□□□□ -0.91
TNPO1-201ENST00000337273 CCDC141Q6ZP82 1450 aa9.34□□□□□ -0.91
TNPO1-201ENST00000337273 AKAP2Q9Y2D5 859 aa9.34□□□□□ -0.91
TNPO1-201ENST00000337273 U3KPZ7 1027 aaPredicted RBP9.34□□□□□ -0.91
TNPO1-201ENST00000337273 MIS18AQ9NYP9 233 aa9.34□□□□□ -0.91
TNPO1-201ENST00000337273 KRI1Q8N9T8 703 aaKnown RBP9.34□□□□□ -0.91
TNPO1-201ENST00000337273 SLC52A1Q9NWF4 448 aa9.34□□□□□ -0.91
TNPO1-201ENST00000337273 LRRFIP2Q9Y608 721 aaKnown RBP9.34□□□□□ -0.91
TNPO1-201ENST00000337273 FKBP15Q5T1M5 1219 aa9.34□□□□□ -0.91
TNPO1-201ENST00000337273 EIF5P55010 431 aaKnown RBP9.34□□□□□ -0.91
TNPO1-201ENST00000337273 C16orf45Q96MC5 204 aaPredicted RBP9.34□□□□□ -0.91
TNPO1-201ENST00000337273 TAOK3Q9H2K8 898 aa9.34□□□□□ -0.91
TNPO1-201ENST00000337273 TIAM1Q13009 1591 aa9.34□□□□□ -0.91
TNPO1-201ENST00000337273 TERF1P54274 439 aa9.34□□□□□ -0.92
TNPO1-201ENST00000337273 RAB34Q9BZG1 259 aa9.33□□□□□ -0.92
TNPO1-201ENST00000337273 KANK3Q6NY19 840 aa9.33□□□□□ -0.92
TNPO1-201ENST00000337273 SPG7Q9UQ90 795 aa9.33□□□□□ -0.92
TNPO1-201ENST00000337273 TATP17735 454 aaPredicted RBP9.33□□□□□ -0.92
TNPO1-201ENST00000337273 HSP90AA4PQ58FG1 418 aa9.33□□□□□ -0.92
TNPO1-201ENST00000337273 CABP2Q9NPB3 220 aa9.33□□□□□ -0.92
TNPO1-201ENST00000337273 PAFAH1B1P43034 410 aa9.33□□□□□ -0.92
TNPO1-201ENST00000337273 ANKRD62A6NC57 917 aa9.33□□□□□ -0.92
TNPO1-201ENST00000337273 SYTL4Q96C24 671 aaPredicted RBP9.33□□□□□ -0.92
TNPO1-201ENST00000337273 JAKMIP1Q96N16 626 aaKnown RBP9.33□□□□□ -0.92
TNPO1-201ENST00000337273 EHBP1Q8NDI1 1231 aa9.33□□□□□ -0.92
TNPO1-201ENST00000337273 UBAC1Q9BSL1 405 aa9.33□□□□□ -0.92
TNPO1-201ENST00000337273 BMS1Q14692 1282 aaKnown RBP9.32□□□□□ -0.92
TNPO1-201ENST00000337273 GIGYF2Q6Y7W6 1299 aaKnown RBP9.32□□□□□ -0.92
TNPO1-201ENST00000337273 STAMBPO95630 424 aa9.32□□□□□ -0.92
TNPO1-201ENST00000337273 TAX1BP1Q86VP1 789 aa9.32□□□□□ -0.92
TNPO1-201ENST00000337273 ZNF644Q9H582 1327 aaPredicted RBP9.32□□□□□ -0.92
TNPO1-201ENST00000337273 LUZP1Q86V48 1076 aa9.32□□□□□ -0.92
TNPO1-201ENST00000337273 SMC1AQ14683 1233 aaKnown RBP9.32□□□□□ -0.92
TNPO1-201ENST00000337273 ISM2Q6H9L7 571 aa9.32□□□□□ -0.92
TNPO1-201ENST00000337273 PPM1EQ8WY54 764 aa9.32□□□□□ -0.92
TNPO1-201ENST00000337273 TSG101Q99816 390 aa9.32□□□□□ -0.92
TNPO1-201ENST00000337273 SRGAP3O43295 1099 aa9.32□□□□□ -0.92
TNPO1-201ENST00000337273 TOP1P11387 765 aaKnown RBP9.32□□□□□ -0.92
TNPO1-201ENST00000337273 SIL1Q9H173 461 aa9.32□□□□□ -0.92
TNPO1-201ENST00000337273 CLIP2Q9UDT6 1046 aa9.32□□□□□ -0.92
TNPO1-201ENST00000337273 KLHL40Q2TBA0 621 aa9.31□□□□□ -0.92
TNPO1-201ENST00000337273 ABTB2Q8N961 1025 aa9.31□□□□□ -0.92
TNPO1-201ENST00000337273 C9orf84Q5VXU9 1444 aa9.31□□□□□ -0.92
TNPO1-201ENST00000337273 NF2P35240 595 aa9.31□□□□□ -0.92
TNPO1-201ENST00000337273 CCDC150Q8NCX0 1101 aa9.31□□□□□ -0.92
TNPO1-201ENST00000337273 GRIN2BQ13224 1484 aa9.31□□□□□ -0.92
TNPO1-201ENST00000337273 CKAP2LQ8IYA6 745 aa9.31□□□□□ -0.92
TNPO1-201ENST00000337273 IVLP07476 585 aa9.31□□□□□ -0.92
TNPO1-201ENST00000337273 PDE6BP35913 854 aa9.31□□□□□ -0.92
TNPO1-201ENST00000337273 SERPINA10Q9UK55 444 aa9.31□□□□□ -0.92
TNPO1-201ENST00000337273 PTPRCP08575 1304 aa9.31□□□□□ -0.92
TNPO1-201ENST00000337273 CASTP20810 708 aaKnown RBP9.31□□□□□ -0.92
TNPO1-201ENST00000337273 FEZ1Q99689 392 aa9.31□□□□□ -0.92
TNPO1-201ENST00000337273 NLRP2Q9NX02 1062 aa9.31□□□□□ -0.92
TNPO1-201ENST00000337273 CCDC171Q6TFL3 1326 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms