RNA–Protein interactions for RNA: ENST00000336915.10

SKAP1-201, Transcript of src kinase associated phosphoprotein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKAP1, Length 1,534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKAP1-201ENST00000336915 AK7Q96M32 723 aa11.67□□□□□ -0.54
SKAP1-201ENST00000336915 INSRP06213 1382 aa11.67□□□□□ -0.54
SKAP1-201ENST00000336915 FLT4P35916 1363 aa11.67□□□□□ -0.54
SKAP1-201ENST00000336915 CCDC88AQ3V6T2 1871 aa11.67□□□□□ -0.54
SKAP1-201ENST00000336915 CGNL1Q0VF96 1302 aa11.67□□□□□ -0.54
SKAP1-201ENST00000336915 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.66□□□□□ -0.54
SKAP1-201ENST00000336915 ANP32CO43423 234 aa11.66□□□□□ -0.54
SKAP1-201ENST00000336915 LINC00116Q8NCU8 138 aa11.66□□□□□ -0.54
SKAP1-201ENST00000336915 POLR3GLQ9BT43 218 aa11.66□□□□□ -0.54
SKAP1-201ENST00000336915 PXDNLA1KZ92 1463 aa11.66□□□□□ -0.54
SKAP1-201ENST00000336915 NCAPD2Q15021 1401 aa11.65□□□□□ -0.54
SKAP1-201ENST00000336915 PIGBQ92521 554 aa11.65□□□□□ -0.54
SKAP1-201ENST00000336915 EMILIN1Q9Y6C2 1016 aa11.65□□□□□ -0.54
SKAP1-201ENST00000336915 ZNF831Q5JPB2 1677 aa11.65□□□□□ -0.54
SKAP1-201ENST00000336915 KIF3CO14782 793 aa11.65□□□□□ -0.55
SKAP1-201ENST00000336915 TSHZ2Q9NRE2 1034 aa11.65□□□□□ -0.55
SKAP1-201ENST00000336915 CCER2I3L3R5 266 aa11.64□□□□□ -0.55
SKAP1-201ENST00000336915 FLAD1Q8NFF5 587 aa11.64□□□□□ -0.55
SKAP1-201ENST00000336915 TJP1Q07157 1748 aa11.64□□□□□ -0.55
SKAP1-201ENST00000336915 ITPK1Q13572 414 aa11.63□□□□□ -0.55
SKAP1-201ENST00000336915 SUPT16HQ9Y5B9 1047 aaKnown RBP11.63□□□□□ -0.55
SKAP1-201ENST00000336915 NSD3Q9BZ95 1437 aa11.62□□□□□ -0.55
SKAP1-201ENST00000336915 AFDNP55196 1824 aaKnown RBP11.62□□□□□ -0.55
SKAP1-201ENST00000336915 LOC102724428A0A0B4J2F2 783 aa11.62□□□□□ -0.55
SKAP1-201ENST00000336915 GNPATO15228 680 aa11.62□□□□□ -0.55
SKAP1-201ENST00000336915 PER1O15534 1290 aaPredicted RBP11.62□□□□□ -0.55
SKAP1-201ENST00000336915 SIK1P57059 783 aa11.62□□□□□ -0.55
SKAP1-201ENST00000336915 ASAP1Q9ULH1 1129 aa11.62□□□□□ -0.55
SKAP1-201ENST00000336915 PPM1GO15355 546 aaPredicted RBP11.61□□□□□ -0.55
SKAP1-201ENST00000336915 SSFA2P28290 1259 aa11.61□□□□□ -0.55
SKAP1-201ENST00000336915 SMARCC1Q92922 1105 aaPredicted RBP11.61□□□□□ -0.55
SKAP1-201ENST00000336915 YTHDC1Q96MU7 727 aaKnown RBP11.61□□□□□ -0.55
SKAP1-201ENST00000336915 PRKRIP1Q9H875 184 aaPredicted RBP11.61□□□□□ -0.55
SKAP1-201ENST00000336915 SCN11AQ9UI33 1791 aa11.61□□□□□ -0.55
SKAP1-201ENST00000336915 ADAMTS7Q9UKP4 1686 aa11.61□□□□□ -0.55
SKAP1-201ENST00000336915 CARD14Q9BXL6 1004 aa11.6□□□□□ -0.55
SKAP1-201ENST00000336915 PANK3Q9H999 370 aa11.6□□□□□ -0.55
SKAP1-201ENST00000336915 TNRC6CQ9HCJ0 1690 aaKnown RBP11.6□□□□□ -0.55
SKAP1-201ENST00000336915 KDRP35968 1356 aa11.6□□□□□ -0.55
SKAP1-201ENST00000336915 KIF24Q5T7B8 1368 aa11.6□□□□□ -0.55
SKAP1-201ENST00000336915 MMP10P09238 476 aa11.6□□□□□ -0.55
SKAP1-201ENST00000336915 ATP6V1AP38606 617 aa11.6□□□□□ -0.55
SKAP1-201ENST00000336915 C10orf71Q711Q0 1435 aa11.59□□□□□ -0.55
SKAP1-201ENST00000336915 TIAM2Q8IVF5 1701 aa11.59□□□□□ -0.55
SKAP1-201ENST00000336915 CACNA1SQ13698 1873 aa11.59□□□□□ -0.55
SKAP1-201ENST00000336915 DLEC1Q9Y238 1755 aa11.59□□□□□ -0.55
SKAP1-201ENST00000336915 NKX1-1Q15270 411 aaPredicted RBP11.59□□□□□ -0.55
SKAP1-201ENST00000336915 TMOD3Q9NYL9 352 aa11.59□□□□□ -0.55
SKAP1-201ENST00000336915 A0A0G2JLW4 131 aa11.58□□□□□ -0.56
SKAP1-201ENST00000336915 SLC4A9Q96Q91 983 aa11.58□□□□□ -0.56
SKAP1-201ENST00000336915 EYA1Q99502 592 aa11.58□□□□□ -0.56
SKAP1-201ENST00000336915 NMRK2Q9NPI5 230 aa11.58□□□□□ -0.56
SKAP1-201ENST00000336915 ATG3Q9NT62 314 aa11.58□□□□□ -0.56
SKAP1-201ENST00000336915 BCS1LQ9Y276 419 aa11.58□□□□□ -0.56
SKAP1-201ENST00000336915 PHKG2P15735 406 aa11.57□□□□□ -0.56
SKAP1-201ENST00000336915 HTRA3P83110 453 aa11.57□□□□□ -0.56
SKAP1-201ENST00000336915 SPG7Q9UQ90 795 aa11.57□□□□□ -0.56
SKAP1-201ENST00000336915 NPC1L1Q9UHC9 1359 aa11.57□□□□□ -0.56
SKAP1-201ENST00000336915 PCNTO95613 3336 aa11.56□□□□□ -0.56
SKAP1-201ENST00000336915 KCPQ6ZWJ8 1503 aa11.56□□□□□ -0.56
SKAP1-201ENST00000336915 KDM6AO15550 1401 aaPredicted RBP11.56□□□□□ -0.56
SKAP1-201ENST00000336915 DPEP1P16444 411 aa11.55□□□□□ -0.56
SKAP1-201ENST00000336915 RALBP1Q15311 655 aa11.55□□□□□ -0.56
SKAP1-201ENST00000336915 ARHGAP27Q6ZUM4 889 aa11.55□□□□□ -0.56
SKAP1-201ENST00000336915 DNAJC5GQ8N7S2 189 aa11.55□□□□□ -0.56
SKAP1-201ENST00000336915 RBM42Q9BTD8 480 aaKnown RBP11.55□□□□□ -0.56
SKAP1-201ENST00000336915 TNNT2P45379 298 aaPredicted RBP11.54□□□□□ -0.56
SKAP1-201ENST00000336915 APLP1P51693 650 aa11.54□□□□□ -0.56
SKAP1-201ENST00000336915 AMER1Q5JTC6 1135 aaPredicted RBP11.54□□□□□ -0.56
SKAP1-201ENST00000336915 IFNL2Q8IZJ0 200 aa11.54□□□□□ -0.56
SKAP1-201ENST00000336915 ARHGEF1Q92888 912 aaKnown RBP11.54□□□□□ -0.56
SKAP1-201ENST00000336915 NRXN2Q9P2S2 1712 aa11.53□□□□□ -0.56
SKAP1-201ENST00000336915 TOMM70O94826 608 aa11.53□□□□□ -0.56
SKAP1-201ENST00000336915 FCHSD2O94868 740 aa11.53□□□□□ -0.56
SKAP1-201ENST00000336915 GYS1P13807 737 aa11.53□□□□□ -0.56
SKAP1-201ENST00000336915 EIF4A2Q14240 407 aaKnown RBP11.53□□□□□ -0.56
SKAP1-201ENST00000336915 POLKQ9UBT6 870 aa11.53□□□□□ -0.56
SKAP1-201ENST00000336915 RTCBQ9Y3I0 505 aaKnown RBP11.53□□□□□ -0.56
SKAP1-201ENST00000336915 KNSTRNQ9Y448 316 aa11.53□□□□□ -0.56
SKAP1-201ENST00000336915 ANKRD31Q8N7Z5 1873 aa11.52□□□□□ -0.56
SKAP1-201ENST00000336915 DICER1Q9UPY3 1922 aaKnown RBP11.52□□□□□ -0.56
SKAP1-201ENST00000336915 KCNA3P22001 575 aa11.52□□□□□ -0.57
SKAP1-201ENST00000336915 HMGB2P26583 209 aaKnown RBP11.52□□□□□ -0.57
SKAP1-201ENST00000336915 TGFB2P61812 414 aa11.52□□□□□ -0.57
SKAP1-201ENST00000336915 TRAPPC3LQ5T215 181 aa11.52□□□□□ -0.57
SKAP1-201ENST00000336915 ERICH6BQ5W0A0 696 aa11.52□□□□□ -0.57
SKAP1-201ENST00000336915 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.51□□□□□ -0.57
SKAP1-201ENST00000336915 SRP68Q9UHB9 627 aaKnown RBP11.51□□□□□ -0.57
SKAP1-201ENST00000336915 COL11A2P13942 1736 aaPredicted RBP11.51□□□□□ -0.57
SKAP1-201ENST00000336915 MYBBP1AQ9BQG0 1328 aaKnown RBP11.5□□□□□ -0.57
SKAP1-201ENST00000336915 CNTNAP4Q9C0A0 1308 aa11.5□□□□□ -0.57
SKAP1-201ENST00000336915 C9orf131Q5VYM1 1079 aa11.5□□□□□ -0.57
SKAP1-201ENST00000336915 CCDC87Q9NVE4 849 aa11.5□□□□□ -0.57
SKAP1-201ENST00000336915 UBR2Q8IWV8 1755 aa11.5□□□□□ -0.57
SKAP1-201ENST00000336915 RFC4P35249 363 aa11.5□□□□□ -0.57
SKAP1-201ENST00000336915 NLGN1Q8N2Q7 840 aa11.5□□□□□ -0.57
SKAP1-201ENST00000336915 PARP3Q9Y6F1 533 aa11.5□□□□□ -0.57
SKAP1-201ENST00000336915 CHRNA5P30532 468 aa11.49□□□□□ -0.57
SKAP1-201ENST00000336915 DDR1Q08345 913 aa11.49□□□□□ -0.57
SKAP1-201ENST00000336915 CCDC184Q52MB2 194 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms