RNA–Protein interactions for RNA: ENST00000334478.8

PFDN5-202, Transcript of prefoldin subunit 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN5, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-202ENST00000334478 SIK1P57059 783 aa20.19■□□□□ 0.82
PFDN5-202ENST00000334478 ATG3Q9NT62 314 aa20.19■□□□□ 0.82
PFDN5-202ENST00000334478 PPP1R1BQ9UD71 204 aaPredicted RBP20.19■□□□□ 0.82
PFDN5-202ENST00000334478 SLC16A10Q8TF71 515 aa20.18■□□□□ 0.82
PFDN5-202ENST00000334478 MTHFSDQ2M296 383 aaKnown RBP20.17■□□□□ 0.82
PFDN5-202ENST00000334478 SIPA1L3O60292 1781 aaPredicted RBP20.16■□□□□ 0.82
PFDN5-202ENST00000334478 PTGER2P43116 358 aa20.16■□□□□ 0.82
PFDN5-202ENST00000334478 DDX10Q13206 875 aaKnown RBP20.16■□□□□ 0.82
PFDN5-202ENST00000334478 GAS2L2Q8NHY3 880 aa20.16■□□□□ 0.82
PFDN5-202ENST00000334478 RALBP1Q15311 655 aa20.15■□□□□ 0.82
PFDN5-202ENST00000334478 ATF5Q9Y2D1 282 aaPredicted RBP20.15■□□□□ 0.82
PFDN5-202ENST00000334478 MAP3K5Q99683 1374 aa20.15■□□□□ 0.82
PFDN5-202ENST00000334478 UBR2Q8IWV8 1755 aa20.14■□□□□ 0.81
PFDN5-202ENST00000334478 TJP1Q07157 1748 aa20.14■□□□□ 0.81
PFDN5-202ENST00000334478 ATP6V1AP38606 617 aa20.14■□□□□ 0.81
PFDN5-202ENST00000334478 NFATC2IPQ8NCF5 419 aa20.14■□□□□ 0.81
PFDN5-202ENST00000334478 FLAD1Q8NFF5 587 aa20.14■□□□□ 0.81
PFDN5-202ENST00000334478 AK7Q96M32 723 aa20.14■□□□□ 0.81
PFDN5-202ENST00000334478 RSPH6AQ9H0K4 717 aa20.14■□□□□ 0.81
PFDN5-202ENST00000334478 SLC52A2Q9HAB3 445 aa20.14■□□□□ 0.81
PFDN5-202ENST00000334478 RNMTO43148 476 aaKnown RBP20.13■□□□□ 0.81
PFDN5-202ENST00000334478 U2AF1L5P0DN76 240 aaPredicted RBP20.13■□□□□ 0.81
PFDN5-202ENST00000334478 PRKAR2BP31323 418 aa20.13■□□□□ 0.81
PFDN5-202ENST00000334478 U2AF1Q01081 240 aaKnown RBP eCLIP20.13■□□□□ 0.81
PFDN5-202ENST00000334478 SGIP1Q9BQI5 828 aa20.13■□□□□ 0.81
PFDN5-202ENST00000334478 FCHSD2O94868 740 aa20.12■□□□□ 0.81
PFDN5-202ENST00000334478 LINC00116Q8NCU8 138 aa20.12■□□□□ 0.81
PFDN5-202ENST00000334478 ITPK1Q13572 414 aa20.11■□□□□ 0.81
PFDN5-202ENST00000334478 RBM42Q9BTD8 480 aaKnown RBP20.11■□□□□ 0.81
PFDN5-202ENST00000334478 LGR6Q9HBX8 967 aa20.11■□□□□ 0.81
PFDN5-202ENST00000334478 GNAT3A8MTJ3 354 aa20.1■□□□□ 0.81
PFDN5-202ENST00000334478 COL23A1Q86Y22 540 aaPredicted RBP20.1■□□□□ 0.81
PFDN5-202ENST00000334478 SSFA2P28290 1259 aa20.09■□□□□ 0.81
PFDN5-202ENST00000334478 KCPQ6ZWJ8 1503 aa20.08■□□□□ 0.81
PFDN5-202ENST00000334478 DLG5Q8TDM6 1919 aa20.08■□□□□ 0.81
PFDN5-202ENST00000334478 MSH5O43196 834 aa20.08■□□□□ 0.81
PFDN5-202ENST00000334478 POLD1P28340 1107 aa20.08■□□□□ 0.81
PFDN5-202ENST00000334478 PHACTR3Q96KR7 559 aa20.08■□□□□ 0.81
PFDN5-202ENST00000334478 SLC4A9Q96Q91 983 aa20.08■□□□□ 0.81
PFDN5-202ENST00000334478 MYH14Q7Z406 1995 aaKnown RBP20.08■□□□□ 0.8
PFDN5-202ENST00000334478 MYBBP1AQ9BQG0 1328 aaKnown RBP20.07■□□□□ 0.8
PFDN5-202ENST00000334478 CNTNAP4Q9C0A0 1308 aa20.07■□□□□ 0.8
PFDN5-202ENST00000334478 C4AP0C0L4 1744 aa20.07■□□□□ 0.8
PFDN5-202ENST00000334478 CEMIPQ8WUJ3 1361 aa20.07■□□□□ 0.8
PFDN5-202ENST00000334478 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.06■□□□□ 0.8
PFDN5-202ENST00000334478 GNPATO15228 680 aa20.06■□□□□ 0.8
PFDN5-202ENST00000334478 PTCD1O75127 700 aaKnown RBP20.06■□□□□ 0.8
PFDN5-202ENST00000334478 ARXQ96QS3 562 aa20.06■□□□□ 0.8
PFDN5-202ENST00000334478 PHF14O94880 888 aa20.05■□□□□ 0.8
PFDN5-202ENST00000334478 TEFQ10587 303 aa20.05■□□□□ 0.8
PFDN5-202ENST00000334478 RC3H1Q5TC82 1133 aaKnown RBP20.05■□□□□ 0.8
PFDN5-202ENST00000334478 NEFMP07197 916 aa20.04■□□□□ 0.8
PFDN5-202ENST00000334478 AMIGO3Q86WK7 504 aa20.04■□□□□ 0.8
PFDN5-202ENST00000334478 IL17REQ8NFR9 667 aa20.03■□□□□ 0.8
PFDN5-202ENST00000334478 FHDC1Q9C0D6 1143 aaPredicted RBP20.03■□□□□ 0.8
PFDN5-202ENST00000334478 PNNQ9H307 717 aaKnown RBP20.02■□□□□ 0.8
PFDN5-202ENST00000334478 RTCBQ9Y3I0 505 aaKnown RBP20.02■□□□□ 0.8
PFDN5-202ENST00000334478 ADRA2BP18089 450 aa20.01■□□□□ 0.79
PFDN5-202ENST00000334478 SLC39A6Q13433 755 aa20.01■□□□□ 0.79
PFDN5-202ENST00000334478 RTF1Q92541 710 aaKnown RBP20.01■□□□□ 0.79
PFDN5-202ENST00000334478 HTATSF1O43719 755 aaKnown RBP20■□□□□ 0.79
PFDN5-202ENST00000334478 TTC5Q8N0Z6 440 aa20■□□□□ 0.79
PFDN5-202ENST00000334478 VSIG10Q8N0Z9 540 aa20■□□□□ 0.79
PFDN5-202ENST00000334478 SYT17Q9BSW7 474 aa20■□□□□ 0.79
PFDN5-202ENST00000334478 RPS6KA4O75676 772 aa19.99■□□□□ 0.79
PFDN5-202ENST00000334478 CRKLP46109 303 aaKnown RBP19.99■□□□□ 0.79
PFDN5-202ENST00000334478 MSL1Q68DK7 614 aa19.99■□□□□ 0.79
PFDN5-202ENST00000334478 TRAPPC3LQ5T215 181 aa19.98■□□□□ 0.79
PFDN5-202ENST00000334478 ZNF790Q6PG37 636 aa19.98■□□□□ 0.79
PFDN5-202ENST00000334478 PLEKHF1Q96S99 279 aa19.98■□□□□ 0.79
PFDN5-202ENST00000334478 PRKRIP1Q9H875 184 aaPredicted RBP19.98■□□□□ 0.79
PFDN5-202ENST00000334478 MAPK8IP3Q9UPT6 1336 aa19.98■□□□□ 0.79
PFDN5-202ENST00000334478 DCAF8L1A6NGE4 600 aa19.97■□□□□ 0.79
PFDN5-202ENST00000334478 SMIM5Q71RC9 77 aa19.97■□□□□ 0.79
PFDN5-202ENST00000334478 DNAJC10Q8IXB1 793 aa19.96■□□□□ 0.79
PFDN5-202ENST00000334478 HEG1Q9ULI3 1381 aa19.95■□□□□ 0.79
PFDN5-202ENST00000334478 MCM10Q7L590 875 aa19.95■□□□□ 0.78
PFDN5-202ENST00000334478 CCDC87Q9NVE4 849 aa19.95■□□□□ 0.78
PFDN5-202ENST00000334478 KDM3BQ7LBC6 1761 aa19.95■□□□□ 0.78
PFDN5-202ENST00000334478 ZNF316A6NFI3 1004 aaPredicted RBP19.94■□□□□ 0.78
PFDN5-202ENST00000334478 BTBD11A6QL63 1104 aa19.94■□□□□ 0.78
PFDN5-202ENST00000334478 CYP19A1P11511 503 aaPredicted RBP19.94■□□□□ 0.78
PFDN5-202ENST00000334478 RFC4P35249 363 aa19.94■□□□□ 0.78
PFDN5-202ENST00000334478 NFE2L2Q16236 605 aa19.94■□□□□ 0.78
PFDN5-202ENST00000334478 ARHGEF1Q92888 912 aaKnown RBP19.94■□□□□ 0.78
PFDN5-202ENST00000334478 KIF13BQ9NQT8 1826 aa19.93■□□□□ 0.78
PFDN5-202ENST00000334478 INTS5Q6P9B9 1019 aaKnown RBP19.93■□□□□ 0.78
PFDN5-202ENST00000334478 KLHL34Q8N239 644 aa19.93■□□□□ 0.78
PFDN5-202ENST00000334478 ZNF496Q96IT1 587 aaPredicted RBP19.93■□□□□ 0.78
PFDN5-202ENST00000334478 LAMB4A4D0S4 1761 aa19.93■□□□□ 0.78
PFDN5-202ENST00000334478 FMNL2Q96PY5 1086 aa19.92■□□□□ 0.78
PFDN5-202ENST00000334478 TEX13AQ9BXU3 409 aaPredicted RBP19.92■□□□□ 0.78
PFDN5-202ENST00000334478 STARD3NLO95772 234 aa19.91■□□□□ 0.78
PFDN5-202ENST00000334478 DCTN1Q14203 1278 aa19.91■□□□□ 0.78
PFDN5-202ENST00000334478 WDR43Q15061 677 aaKnown RBP eCLIP19.91■□□□□ 0.78
PFDN5-202ENST00000334478 NLGN1Q8N2Q7 840 aa19.91■□□□□ 0.78
PFDN5-202ENST00000334478 SOS1Q07889 1333 aaPredicted RBP19.91■□□□□ 0.78
PFDN5-202ENST00000334478 CD2APQ9Y5K6 639 aa19.9■□□□□ 0.78
PFDN5-202ENST00000334478 USP42Q9H9J4 1324 aaKnown RBP19.9■□□□□ 0.78
PFDN5-202ENST00000334478 COL15A1P39059 1388 aa19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 128 ms