RNA–Protein interactions for RNA: ENST00000334165.4

LINC00846-201, long intergenic non-protein coding RNA 846, humanhuman

TSL 2 BASIC

Gene LINC00846, Length 1,778 nt, Biotype 3prime overlapping ncRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00846-201ENST00000334165 ITPRIPQ8IWB1 547 aa17.29■□□□□ 0.36
LINC00846-201ENST00000334165 CHMP4AQ9BY43 222 aa17.28■□□□□ 0.36
LINC00846-201ENST00000334165 SLC4A2P04920 1241 aa17.28■□□□□ 0.36
LINC00846-201ENST00000334165 EIF4A1P60842 406 aaKnown RBP17.28■□□□□ 0.36
LINC00846-201ENST00000334165 CCDC30Q5VVM6 783 aa17.28■□□□□ 0.36
LINC00846-201ENST00000334165 CHMP4BQ9H444 224 aaKnown RBP17.28■□□□□ 0.36
LINC00846-201ENST00000334165 PTPRCP08575 1304 aa17.27■□□□□ 0.36
LINC00846-201ENST00000334165 HSP90AB1P08238 724 aaKnown RBP17.27■□□□□ 0.35
LINC00846-201ENST00000334165 LARP1Q6PKG0 1096 aaKnown RBP17.27■□□□□ 0.35
LINC00846-201ENST00000334165 STRN4Q9NRL3 753 aa17.27■□□□□ 0.35
LINC00846-201ENST00000334165 ABCA3Q99758 1704 aa17.27■□□□□ 0.35
LINC00846-201ENST00000334165 HOXB7P09629 217 aa17.26■□□□□ 0.35
LINC00846-201ENST00000334165 DCAF5Q96JK2 942 aa17.26■□□□□ 0.35
LINC00846-201ENST00000334165 ABCC4O15439 1325 aa17.26■□□□□ 0.35
LINC00846-201ENST00000334165 CYP27B1O15528 508 aa17.25■□□□□ 0.35
LINC00846-201ENST00000334165 STK31Q9BXU1 1019 aa17.25■□□□□ 0.35
LINC00846-201ENST00000334165 BTG4Q9NY30 223 aa17.25■□□□□ 0.35
LINC00846-201ENST00000334165 IL2RBP14784 551 aa17.25■□□□□ 0.35
LINC00846-201ENST00000334165 PIP4K2BP78356 416 aa17.25■□□□□ 0.35
LINC00846-201ENST00000334165 DDRGK1Q96HY6 314 aa17.25■□□□□ 0.35
LINC00846-201ENST00000334165 ZBTB40Q9NUA8 1239 aa17.25■□□□□ 0.35
LINC00846-201ENST00000334165 PCDHB15Q9Y5E8 787 aa17.25■□□□□ 0.35
LINC00846-201ENST00000334165 ZCRB1Q8TBF4 217 aaKnown RBP17.24■□□□□ 0.35
LINC00846-201ENST00000334165 SLC52A2Q9HAB3 445 aa17.24■□□□□ 0.35
LINC00846-201ENST00000334165 COL22A1Q8NFW1 1626 aaPredicted RBP17.23■□□□□ 0.35
LINC00846-201ENST00000334165 ZBTB7BO15156 539 aaPredicted RBP17.23■□□□□ 0.35
LINC00846-201ENST00000334165 IGHDP01880 384 aa17.23■□□□□ 0.35
LINC00846-201ENST00000334165 UBAP1LF5GYI3 381 aa17.23■□□□□ 0.35
LINC00846-201ENST00000334165 KDM6AO15550 1401 aaPredicted RBP17.22■□□□□ 0.35
LINC00846-201ENST00000334165 KCNQ3O43525 872 aa17.22■□□□□ 0.35
LINC00846-201ENST00000334165 INTS3Q68E01 1043 aaKnown RBP17.22■□□□□ 0.35
LINC00846-201ENST00000334165 PCDH11XQ9BZA7 1347 aa17.22■□□□□ 0.35
LINC00846-201ENST00000334165 PCDH11YQ9BZA8 1340 aa17.22■□□□□ 0.35
LINC00846-201ENST00000334165 RWDD1Q9H446 243 aaPredicted RBP17.22■□□□□ 0.35
LINC00846-201ENST00000334165 ADAMTS7Q9UKP4 1686 aa17.21■□□□□ 0.35
LINC00846-201ENST00000334165 HDGFL1Q5TGJ6 251 aa17.21■□□□□ 0.35
LINC00846-201ENST00000334165 HEG1Q9ULI3 1381 aa17.2■□□□□ 0.34
LINC00846-201ENST00000334165 NFATC2IPQ8NCF5 419 aa17.2■□□□□ 0.34
LINC00846-201ENST00000334165 COL16A1Q07092 1604 aaPredicted RBP17.2■□□□□ 0.34
LINC00846-201ENST00000334165 GIGYF1O75420 1035 aaPredicted RBP17.19■□□□□ 0.34
LINC00846-201ENST00000334165 NKX1-1Q15270 411 aaPredicted RBP17.19■□□□□ 0.34
LINC00846-201ENST00000334165 ZNF790Q6PG37 636 aa17.19■□□□□ 0.34
LINC00846-201ENST00000334165 G2E3Q7L622 706 aa17.19■□□□□ 0.34
LINC00846-201ENST00000334165 RGS12O14924 1447 aa17.19■□□□□ 0.34
LINC00846-201ENST00000334165 FLIIQ13045 1269 aa17.18■□□□□ 0.34
LINC00846-201ENST00000334165 HDAC1Q13547 482 aaPredicted RBP17.18■□□□□ 0.34
LINC00846-201ENST00000334165 PKD1L3Q7Z443 1732 aa17.18■□□□□ 0.34
LINC00846-201ENST00000334165 COL14A1Q05707 1796 aaKnown RBP17.18■□□□□ 0.34
LINC00846-201ENST00000334165 PHLPP1O60346 1717 aa17.18■□□□□ 0.34
LINC00846-201ENST00000334165 CABP4P57796 275 aa17.17■□□□□ 0.34
LINC00846-201ENST00000334165 NECTIN2Q92692 538 aa17.17■□□□□ 0.34
LINC00846-201ENST00000334165 EIF2S2P20042 333 aaKnown RBP17.17■□□□□ 0.34
LINC00846-201ENST00000334165 KDM3BQ7LBC6 1761 aa17.16■□□□□ 0.34
LINC00846-201ENST00000334165 ERVV-2B6SEH9 535 aa17.16■□□□□ 0.34
LINC00846-201ENST00000334165 ADAMTS2O95450 1211 aa17.15■□□□□ 0.34
LINC00846-201ENST00000334165 MRC1P22897 1456 aa17.15■□□□□ 0.34
LINC00846-201ENST00000334165 PARP4Q9UKK3 1724 aaKnown RBP17.15■□□□□ 0.34
LINC00846-201ENST00000334165 CCT4P50991 539 aaKnown RBP17.15■□□□□ 0.34
LINC00846-201ENST00000334165 FKBP5Q13451 457 aaPredicted RBP17.15■□□□□ 0.34
LINC00846-201ENST00000334165 DDX54Q8TDD1 881 aaKnown RBP17.15■□□□□ 0.34
LINC00846-201ENST00000334165 DBF4Q9UBU7 674 aaPredicted RBP17.15■□□□□ 0.34
LINC00846-201ENST00000334165 SLC39A6Q13433 755 aa17.14■□□□□ 0.33
LINC00846-201ENST00000334165 TTC5Q8N0Z6 440 aa17.13■□□□□ 0.33
LINC00846-201ENST00000334165 CERKQ8TCT0 537 aa17.13■□□□□ 0.33
LINC00846-201ENST00000334165 BACH2Q9BYV9 841 aa17.13■□□□□ 0.33
LINC00846-201ENST00000334165 CHPF2Q9P2E5 772 aa17.13■□□□□ 0.33
LINC00846-201ENST00000334165 SCN11AQ9UI33 1791 aa17.13■□□□□ 0.33
LINC00846-201ENST00000334165 NUTM2BA6NNL0 878 aaPredicted RBP17.12■□□□□ 0.33
LINC00846-201ENST00000334165 NUTM2EB1AL46 878 aaPredicted RBP17.12■□□□□ 0.33
LINC00846-201ENST00000334165 F6X3S4 739 aa17.12■□□□□ 0.33
LINC00846-201ENST00000334165 NUTM2AQ8IVF1 878 aaPredicted RBP17.12■□□□□ 0.33
LINC00846-201ENST00000334165 PDE4AP27815 886 aa17.12■□□□□ 0.33
LINC00846-201ENST00000334165 SLC4A10Q6U841 1118 aa17.12■□□□□ 0.33
LINC00846-201ENST00000334165 PHAXQ9H814 394 aaKnown RBP17.12■□□□□ 0.33
LINC00846-201ENST00000334165 ANO8Q9HCE9 1232 aaPredicted RBP17.12■□□□□ 0.33
LINC00846-201ENST00000334165 SIPA1L3O60292 1781 aaPredicted RBP17.11■□□□□ 0.33
LINC00846-201ENST00000334165 ZNF496Q96IT1 587 aaPredicted RBP17.11■□□□□ 0.33
LINC00846-201ENST00000334165 FMNL2Q96PY5 1086 aa17.11■□□□□ 0.33
LINC00846-201ENST00000334165 CDCA7Q9BWT1 371 aaPredicted RBP17.11■□□□□ 0.33
LINC00846-201ENST00000334165 THRAP3Q9Y2W1 955 aaKnown RBP17.11■□□□□ 0.33
LINC00846-201ENST00000334165 DISP2A7MBM2 1401 aa17.11■□□□□ 0.33
LINC00846-201ENST00000334165 SNRPA1P09661 255 aaKnown RBP17.1■□□□□ 0.33
LINC00846-201ENST00000334165 SKAP1Q86WV1 359 aa17.1■□□□□ 0.33
LINC00846-201ENST00000334165 JCADQ9P266 1359 aa17.1■□□□□ 0.33
LINC00846-201ENST00000334165 SMC5Q8IY18 1101 aa17.1■□□□□ 0.33
LINC00846-201ENST00000334165 HYPKQ9NX55 129 aa17.1■□□□□ 0.33
LINC00846-201ENST00000334165 PRAMEF22A3QJZ6 481 aa17.09■□□□□ 0.33
LINC00846-201ENST00000334165 EXOC5O00471 708 aa17.09■□□□□ 0.33
LINC00846-201ENST00000334165 SPATA31A1Q5TZJ5 1347 aa17.09■□□□□ 0.33
LINC00846-201ENST00000334165 C1orf115Q9H7X2 142 aa17.08■□□□□ 0.33
LINC00846-201ENST00000334165 DDX21Q9NR30 783 aaKnown RBP eCLIP17.08■□□□□ 0.33
LINC00846-201ENST00000334165 RPAP2Q8IXW5 612 aaPredicted RBP17.07■□□□□ 0.32
LINC00846-201ENST00000334165 PDZRN3Q9UPQ7 1066 aa17.07■□□□□ 0.32
LINC00846-201ENST00000334165 VIRMAQ69YN4 1812 aaKnown RBP17.07■□□□□ 0.32
LINC00846-201ENST00000334165 MEIS3Q99687 375 aa17.07■□□□□ 0.32
LINC00846-201ENST00000334165 CACNA1FO60840 1977 aa17.06■□□□□ 0.32
LINC00846-201ENST00000334165 SLIT2O94813 1529 aa17.06■□□□□ 0.32
LINC00846-201ENST00000334165 RGS3P49796 1198 aa17.06■□□□□ 0.32
LINC00846-201ENST00000334165 PDIA6Q15084 440 aa17.06■□□□□ 0.32
LINC00846-201ENST00000334165 SIRT2Q8IXJ6 389 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms