RNA–Protein interactions for RNA: ENST00000332728.8

LYSMD4-201, Transcript of LysM domain containing 4, humanhuman

TSL 4 BASIC

Gene LYSMD4, Length 2,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-201ENST00000332728 HAP1P54257 671 aaPredicted RBP22.55■■□□□ 1.2
LYSMD4-201ENST00000332728 HSP90AB1P08238 724 aaKnown RBP22.54■■□□□ 1.2
LYSMD4-201ENST00000332728 SDSP20132 328 aa22.54■■□□□ 1.2
LYSMD4-201ENST00000332728 PIP4K2AP48426 406 aaPredicted RBP22.54■■□□□ 1.2
LYSMD4-201ENST00000332728 BRPF3Q9ULD4 1205 aa22.54■■□□□ 1.2
LYSMD4-201ENST00000332728 ANKARQ7Z5J8 1434 aa22.54■■□□□ 1.2
LYSMD4-201ENST00000332728 TTC22Q5TAA0 569 aa22.53■■□□□ 1.2
LYSMD4-201ENST00000332728 BTBD11A6QL63 1104 aa22.53■■□□□ 1.2
LYSMD4-201ENST00000332728 GNAI2P04899 355 aa22.53■■□□□ 1.2
LYSMD4-201ENST00000332728 RPAP2Q8IXW5 612 aaPredicted RBP22.53■■□□□ 1.2
LYSMD4-201ENST00000332728 SLC39A6Q13433 755 aa22.53■■□□□ 1.2
LYSMD4-201ENST00000332728 CDC45O75419 566 aa22.52■■□□□ 1.2
LYSMD4-201ENST00000332728 AIMP1Q12904 312 aaKnown RBP22.52■■□□□ 1.2
LYSMD4-201ENST00000332728 KIF2CQ99661 725 aa22.52■■□□□ 1.2
LYSMD4-201ENST00000332728 NLRP2Q9NX02 1062 aa22.52■■□□□ 1.2
LYSMD4-201ENST00000332728 NPHP4O75161 1426 aaPredicted RBP22.51■■□□□ 1.19
LYSMD4-201ENST00000332728 CCT4P50991 539 aaKnown RBP22.51■■□□□ 1.19
LYSMD4-201ENST00000332728 PROSER3Q2NL68 480 aa22.51■■□□□ 1.19
LYSMD4-201ENST00000332728 NWD1Q149M9 1564 aa22.51■■□□□ 1.19
LYSMD4-201ENST00000332728 PI4KAP2A4QPH2 592 aa22.5■■□□□ 1.19
LYSMD4-201ENST00000332728 PI4KAP1Q8N8J0 262 aa22.5■■□□□ 1.19
LYSMD4-201ENST00000332728 RILPL2Q969X0 211 aa22.5■■□□□ 1.19
LYSMD4-201ENST00000332728 NUTM1Q86Y26 1132 aa22.49■■□□□ 1.19
LYSMD4-201ENST00000332728 NBPF7P0C2Y1 421 aaPredicted RBP22.49■■□□□ 1.19
LYSMD4-201ENST00000332728 C1orf141Q5JVX7 400 aa22.49■■□□□ 1.19
LYSMD4-201ENST00000332728 TRIM6-TRIM34B2RNG4 842 aa22.48■■□□□ 1.19
LYSMD4-201ENST00000332728 NOL8Q76FK4 1167 aaKnown RBP22.48■■□□□ 1.19
LYSMD4-201ENST00000332728 USP44Q9H0E7 712 aa22.48■■□□□ 1.19
LYSMD4-201ENST00000332728 RGPD2P0DJD1 1756 aa22.48■■□□□ 1.19
LYSMD4-201ENST00000332728 ADGRL3Q9HAR2 1447 aa22.48■■□□□ 1.19
LYSMD4-201ENST00000332728 CSB-PGBD3P0DP91 1061 aa22.48■■□□□ 1.19
LYSMD4-201ENST00000332728 EIF4A1P60842 406 aaKnown RBP22.48■■□□□ 1.19
LYSMD4-201ENST00000332728 ARHGEF25Q86VW2 580 aa22.48■■□□□ 1.19
LYSMD4-201ENST00000332728 UBTFL1P0CB47 393 aaPredicted RBP22.47■■□□□ 1.19
LYSMD4-201ENST00000332728 KCNH5Q8NCM2 988 aa22.47■■□□□ 1.19
LYSMD4-201ENST00000332728 HMMRO75330 724 aa22.46■■□□□ 1.19
LYSMD4-201ENST00000332728 JARID2Q92833 1246 aaPredicted RBP22.46■■□□□ 1.19
LYSMD4-201ENST00000332728 MARF1Q9Y4F3 1742 aaKnown RBP22.46■■□□□ 1.19
LYSMD4-201ENST00000332728 RBM25P49756 843 aaKnown RBP22.46■■□□□ 1.19
LYSMD4-201ENST00000332728 LTN1O94822 1766 aa22.45■■□□□ 1.19
LYSMD4-201ENST00000332728 PLEKHO1Q53GL0 409 aaPredicted RBP22.45■■□□□ 1.18
LYSMD4-201ENST00000332728 PXDNQ92626 1479 aa22.44■■□□□ 1.18
LYSMD4-201ENST00000332728 CHD2O14647 1828 aaKnown RBP22.44■■□□□ 1.18
LYSMD4-201ENST00000332728 HTATSF1O43719 755 aaKnown RBP22.44■■□□□ 1.18
LYSMD4-201ENST00000332728 ATF3P18847 181 aa22.44■■□□□ 1.18
LYSMD4-201ENST00000332728 PDE1AP54750 535 aa22.44■■□□□ 1.18
LYSMD4-201ENST00000332728 CWF19L2Q2TBE0 894 aaKnown RBP22.44■■□□□ 1.18
LYSMD4-201ENST00000332728 SURF6O75683 361 aaKnown RBP22.43■■□□□ 1.18
LYSMD4-201ENST00000332728 MYL6BP14649 208 aa22.43■■□□□ 1.18
LYSMD4-201ENST00000332728 UNC5CLQ8IV45 518 aa22.43■■□□□ 1.18
LYSMD4-201ENST00000332728 PPP1R42Q7Z4L9 355 aa22.43■■□□□ 1.18
LYSMD4-201ENST00000332728 RNMTO43148 476 aaKnown RBP22.42■■□□□ 1.18
LYSMD4-201ENST00000332728 SRGAP3O43295 1099 aa22.41■■□□□ 1.18
LYSMD4-201ENST00000332728 LRRCC1Q9C099 1032 aa22.41■■□□□ 1.18
LYSMD4-201ENST00000332728 SRCIN1Q9C0H9 1055 aa22.41■■□□□ 1.18
LYSMD4-201ENST00000332728 FOXD4L5Q5VV16 416 aaPredicted RBP22.41■■□□□ 1.18
LYSMD4-201ENST00000332728 FOXD4L4Q8WXT5 416 aaPredicted RBP22.41■■□□□ 1.18
LYSMD4-201ENST00000332728 GNAI3P08754 354 aa22.4■■□□□ 1.18
LYSMD4-201ENST00000332728 AKAP4Q5JQC9 854 aa22.4■■□□□ 1.18
LYSMD4-201ENST00000332728 DTNBO60941 627 aa22.4■■□□□ 1.18
LYSMD4-201ENST00000332728 CHMP5Q9NZZ3 219 aa22.4■■□□□ 1.18
LYSMD4-201ENST00000332728 PA2G4Q9UQ80 394 aaKnown RBP22.39■■□□□ 1.17
LYSMD4-201ENST00000332728 ATP8B2P98198 1209 aa22.39■■□□□ 1.17
LYSMD4-201ENST00000332728 C19orf44Q9H6X5 657 aa22.39■■□□□ 1.17
LYSMD4-201ENST00000332728 KIF24Q5T7B8 1368 aa22.39■■□□□ 1.17
LYSMD4-201ENST00000332728 MAP3K2Q9Y2U5 619 aa22.38■■□□□ 1.17
LYSMD4-201ENST00000332728 NFAT5O94916 1531 aa22.38■■□□□ 1.17
LYSMD4-201ENST00000332728 TMEM94Q12767 1356 aa22.38■■□□□ 1.17
LYSMD4-201ENST00000332728 OS9Q13438 667 aaPredicted RBP22.38■■□□□ 1.17
LYSMD4-201ENST00000332728 NFATC2IPQ8NCF5 419 aa22.38■■□□□ 1.17
LYSMD4-201ENST00000332728 CHAMP1Q96JM3 812 aa22.38■■□□□ 1.17
LYSMD4-201ENST00000332728 USP26Q9BXU7 913 aa22.38■■□□□ 1.17
LYSMD4-201ENST00000332728 MCM4P33991 863 aa22.37■■□□□ 1.17
LYSMD4-201ENST00000332728 DNAAF4Q8WXU2 420 aa22.37■■□□□ 1.17
LYSMD4-201ENST00000332728 MX1P20591 662 aa22.37■■□□□ 1.17
LYSMD4-201ENST00000332728 SOS1Q07889 1333 aaPredicted RBP22.36■■□□□ 1.17
LYSMD4-201ENST00000332728 RAPGEF4Q8WZA2 1011 aa22.36■■□□□ 1.17
LYSMD4-201ENST00000332728 IL25Q9H293 177 aa22.35■■□□□ 1.17
LYSMD4-201ENST00000332728 CEMIPQ8WUJ3 1361 aa22.35■■□□□ 1.17
LYSMD4-201ENST00000332728 K7ELQ4 463 aaPredicted RBP22.35■■□□□ 1.17
LYSMD4-201ENST00000332728 SSFA2P28290 1259 aa22.35■■□□□ 1.17
LYSMD4-201ENST00000332728 TNPO1Q92973 898 aaKnown RBP22.35■■□□□ 1.17
LYSMD4-201ENST00000332728 ANO2Q9NQ90 1003 aa22.35■■□□□ 1.17
LYSMD4-201ENST00000332728 C9orf78Q9NZ63 289 aaPredicted RBP22.35■■□□□ 1.17
LYSMD4-201ENST00000332728 PKP1Q13835 747 aa22.33■■□□□ 1.17
LYSMD4-201ENST00000332728 CASC1Q6TDU7 716 aa22.33■■□□□ 1.17
LYSMD4-201ENST00000332728 SIL1Q9H173 461 aa22.33■■□□□ 1.17
LYSMD4-201ENST00000332728 C1orf167Q5SNV9 1468 aa22.33■■□□□ 1.16
LYSMD4-201ENST00000332728 BEND3Q5T5X7 828 aa22.33■■□□□ 1.16
LYSMD4-201ENST00000332728 KLHDC4Q8TBB5 520 aa22.33■■□□□ 1.16
LYSMD4-201ENST00000332728 LARP6Q9BRS8 491 aaKnown RBP22.33■■□□□ 1.16
LYSMD4-201ENST00000332728 GIGYF1O75420 1035 aaPredicted RBP22.32■■□□□ 1.16
LYSMD4-201ENST00000332728 AK9Q5TCS8 1911 aa22.32■■□□□ 1.16
LYSMD4-201ENST00000332728 ERBB3P21860 1342 aa22.32■■□□□ 1.16
LYSMD4-201ENST00000332728 PALD1Q9ULE6 856 aa22.32■■□□□ 1.16
LYSMD4-201ENST00000332728 CCDC9Q9Y3X0 531 aaKnown RBP22.31■■□□□ 1.16
LYSMD4-201ENST00000332728 ZGPATQ8N5A5 531 aaKnown RBP22.31■■□□□ 1.16
LYSMD4-201ENST00000332728 TPRNQ4KMQ1 711 aa22.3■■□□□ 1.16
LYSMD4-201ENST00000332728 ADCY9O60503 1353 aa22.3■■□□□ 1.16
LYSMD4-201ENST00000332728 FOXD4L6Q3SYB3 417 aaPredicted RBP22.3■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms