RNA–Protein interactions for RNA: ENST00000332682.8

TRIM49B-201, Transcript of tripartite motif containing 49B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM49B, Length 1,534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49B-201ENST00000332682 FAM98CQ17RN3 349 aaKnown RBP15.61■□□□□ 0.09
TRIM49B-201ENST00000332682 RRP1P56182 461 aaKnown RBP15.6■□□□□ 0.09
TRIM49B-201ENST00000332682 KRT24Q2M2I5 525 aa15.6■□□□□ 0.09
TRIM49B-201ENST00000332682 TWISTNBQ3B726 338 aaPredicted RBP15.6■□□□□ 0.09
TRIM49B-201ENST00000332682 GJD4Q96KN9 370 aaPredicted RBP15.6■□□□□ 0.09
TRIM49B-201ENST00000332682 TRPC5Q9UL62 973 aaPredicted RBP15.6■□□□□ 0.09
TRIM49B-201ENST00000332682 BTBD11A6QL63 1104 aa15.59■□□□□ 0.09
TRIM49B-201ENST00000332682 VAMP4O75379 141 aa15.59■□□□□ 0.09
TRIM49B-201ENST00000332682 PAPPAQ13219 1627 aa15.59■□□□□ 0.09
TRIM49B-201ENST00000332682 DOT1LQ8TEK3 1739 aa15.59■□□□□ 0.09
TRIM49B-201ENST00000332682 ERVV-2B6SEH9 535 aa15.58■□□□□ 0.09
TRIM49B-201ENST00000332682 ELL2O00472 640 aaPredicted RBP15.58■□□□□ 0.09
TRIM49B-201ENST00000332682 BCAR3O75815 825 aa15.58■□□□□ 0.09
TRIM49B-201ENST00000332682 NFATC2IPQ8NCF5 419 aa15.58■□□□□ 0.09
TRIM49B-201ENST00000332682 ZNF428Q96B54 188 aa15.58■□□□□ 0.09
TRIM49B-201ENST00000332682 ITGB4P16144 1822 aa15.58■□□□□ 0.09
TRIM49B-201ENST00000332682 KCNQ3O43525 872 aa15.58■□□□□ 0.08
TRIM49B-201ENST00000332682 GTF3C3Q9Y5Q9 886 aa15.58■□□□□ 0.08
TRIM49B-201ENST00000332682 CABP4P57796 275 aa15.57■□□□□ 0.08
TRIM49B-201ENST00000332682 SSH1Q8WYL5 1049 aa15.57■□□□□ 0.08
TRIM49B-201ENST00000332682 BCL2L13Q9BXK5 485 aa15.57■□□□□ 0.08
TRIM49B-201ENST00000332682 UBR2Q8IWV8 1755 aa15.56■□□□□ 0.08
TRIM49B-201ENST00000332682 NEFLP07196 543 aa15.56■□□□□ 0.08
TRIM49B-201ENST00000332682 EIF4A1P60842 406 aaKnown RBP15.56■□□□□ 0.08
TRIM49B-201ENST00000332682 MARCH10Q8NA82 808 aaPredicted RBP15.56■□□□□ 0.08
TRIM49B-201ENST00000332682 HEG1Q9ULI3 1381 aa15.55■□□□□ 0.08
TRIM49B-201ENST00000332682 SOS1Q07889 1333 aaPredicted RBP15.55■□□□□ 0.08
TRIM49B-201ENST00000332682 ALDH1L2Q3SY69 923 aa15.55■□□□□ 0.08
TRIM49B-201ENST00000332682 QTRT2Q9H974 415 aaKnown RBP15.55■□□□□ 0.08
TRIM49B-201ENST00000332682 SMC4Q9NTJ3 1288 aa15.55■□□□□ 0.08
TRIM49B-201ENST00000332682 PLIN1O60240 522 aa15.54■□□□□ 0.08
TRIM49B-201ENST00000332682 ONECUT3O60422 494 aaPredicted RBP15.54■□□□□ 0.08
TRIM49B-201ENST00000332682 IRX6P78412 446 aaPredicted RBP15.54■□□□□ 0.08
TRIM49B-201ENST00000332682 SLC39A6Q13433 755 aa15.54■□□□□ 0.08
TRIM49B-201ENST00000332682 ZNF790Q6PG37 636 aa15.54■□□□□ 0.08
TRIM49B-201ENST00000332682 C5P01031 1676 aa15.53■□□□□ 0.08
TRIM49B-201ENST00000332682 A0A0G2JS52 829 aa15.53■□□□□ 0.08
TRIM49B-201ENST00000332682 MYT1Q01538 1121 aa15.53■□□□□ 0.08
TRIM49B-201ENST00000332682 ZNF772Q68DY9 489 aaPredicted RBP15.53■□□□□ 0.08
TRIM49B-201ENST00000332682 TMOD3Q9NYL9 352 aa15.53■□□□□ 0.08
TRIM49B-201ENST00000332682 KCPQ6ZWJ8 1503 aa15.52■□□□□ 0.08
TRIM49B-201ENST00000332682 BCL9O00512 1426 aa15.52■□□□□ 0.08
TRIM49B-201ENST00000332682 HOXB7P09629 217 aa15.52■□□□□ 0.07
TRIM49B-201ENST00000332682 BRPF1P55201 1214 aaPredicted RBP15.52■□□□□ 0.07
TRIM49B-201ENST00000332682 FKBP8Q14318 412 aa15.52■□□□□ 0.07
TRIM49B-201ENST00000332682 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.52■□□□□ 0.07
TRIM49B-201ENST00000332682 KAT6BQ8WYB5 2073 aa15.51■□□□□ 0.07
TRIM49B-201ENST00000332682 TTC5Q8N0Z6 440 aa15.51■□□□□ 0.07
TRIM49B-201ENST00000332682 PIGBQ92521 554 aa15.51■□□□□ 0.07
TRIM49B-201ENST00000332682 ZNF496Q96IT1 587 aaPredicted RBP15.51■□□□□ 0.07
TRIM49B-201ENST00000332682 KIF16BQ96L93 1317 aa15.5■□□□□ 0.07
TRIM49B-201ENST00000332682 TCERG1O14776 1098 aaKnown RBP15.5■□□□□ 0.07
TRIM49B-201ENST00000332682 GIGYF1O75420 1035 aaPredicted RBP15.5■□□□□ 0.07
TRIM49B-201ENST00000332682 POTEDQ86YR6 584 aa15.5■□□□□ 0.07
TRIM49B-201ENST00000332682 MRPL50Q8N5N7 158 aaKnown RBP15.5■□□□□ 0.07
TRIM49B-201ENST00000332682 FRAT1Q92837 279 aaPredicted RBP15.5■□□□□ 0.07
TRIM49B-201ENST00000332682 CACNA1FO60840 1977 aa15.5■□□□□ 0.07
TRIM49B-201ENST00000332682 LAMB4A4D0S4 1761 aa15.49■□□□□ 0.07
TRIM49B-201ENST00000332682 C20orf194Q5TEA3 1177 aa15.49■□□□□ 0.07
TRIM49B-201ENST00000332682 SEPT12Q8IYM1 358 aa15.49■□□□□ 0.07
TRIM49B-201ENST00000332682 BRWD3Q6RI45 1802 aa15.48■□□□□ 0.07
TRIM49B-201ENST00000332682 CANXP27824 592 aaKnown RBP15.48■□□□□ 0.07
TRIM49B-201ENST00000332682 PRIM1P49642 420 aaKnown RBP15.48■□□□□ 0.07
TRIM49B-201ENST00000332682 HDGFL1Q5TGJ6 251 aa15.48■□□□□ 0.07
TRIM49B-201ENST00000332682 PRAMEF22A3QJZ6 481 aa15.48■□□□□ 0.07
TRIM49B-201ENST00000332682 CCDC30Q5VVM6 783 aa15.48■□□□□ 0.07
TRIM49B-201ENST00000332682 ZKSCAN2Q63HK3 967 aa15.48■□□□□ 0.07
TRIM49B-201ENST00000332682 SYTL4Q96C24 671 aaPredicted RBP15.48■□□□□ 0.07
TRIM49B-201ENST00000332682 FMNL2Q96PY5 1086 aa15.48■□□□□ 0.07
TRIM49B-201ENST00000332682 NOB1Q9ULX3 412 aaKnown RBP15.48■□□□□ 0.07
TRIM49B-201ENST00000332682 NHSQ6T4R5 1651 aa15.47■□□□□ 0.07
TRIM49B-201ENST00000332682 RBM6P78332 1123 aaKnown RBP15.47■□□□□ 0.07
TRIM49B-201ENST00000332682 ACSBG1Q96GR2 724 aa15.47■□□□□ 0.07
TRIM49B-201ENST00000332682 ATG3Q9NT62 314 aa15.47■□□□□ 0.07
TRIM49B-201ENST00000332682 ASAP1Q9ULH1 1129 aa15.47■□□□□ 0.07
TRIM49B-201ENST00000332682 TRIM27P14373 513 aa15.46■□□□□ 0.07
TRIM49B-201ENST00000332682 PDE3AQ14432 1141 aa15.46■□□□□ 0.07
TRIM49B-201ENST00000332682 NECTIN2Q92692 538 aa15.46■□□□□ 0.07
TRIM49B-201ENST00000332682 STK31Q9BXU1 1019 aa15.46■□□□□ 0.07
TRIM49B-201ENST00000332682 RGS17Q9UGC6 210 aaPredicted RBP15.46■□□□□ 0.07
TRIM49B-201ENST00000332682 TNNQ9UQP3 1299 aa15.46■□□□□ 0.07
TRIM49B-201ENST00000332682 SBF2Q86WG5 1849 aa15.46■□□□□ 0.06
TRIM49B-201ENST00000332682 SLC4A2P04920 1241 aa15.45■□□□□ 0.06
TRIM49B-201ENST00000332682 SNRPA1P09661 255 aaKnown RBP15.45■□□□□ 0.06
TRIM49B-201ENST00000332682 EIF2S2P20042 333 aaKnown RBP15.45■□□□□ 0.06
TRIM49B-201ENST00000332682 ATF7IPQ6VMQ6 1270 aa15.45■□□□□ 0.06
TRIM49B-201ENST00000332682 CHMP4AQ9BY43 222 aa15.45■□□□□ 0.06
TRIM49B-201ENST00000332682 IPO8O15397 1037 aaKnown RBP15.44■□□□□ 0.06
TRIM49B-201ENST00000332682 RLBP1P12271 317 aa15.44■□□□□ 0.06
TRIM49B-201ENST00000332682 ARHGAP45Q92619 1136 aa15.44■□□□□ 0.06
TRIM49B-201ENST00000332682 RGS12O14924 1447 aa15.44■□□□□ 0.06
TRIM49B-201ENST00000332682 KCNQ2O43526 872 aa15.43■□□□□ 0.06
TRIM49B-201ENST00000332682 PTCD1O75127 700 aaKnown RBP15.43■□□□□ 0.06
TRIM49B-201ENST00000332682 FAM182BQ5T319 152 aa15.43■□□□□ 0.06
TRIM49B-201ENST00000332682 ERICH6BQ5W0A0 696 aa15.43■□□□□ 0.06
TRIM49B-201ENST00000332682 PANK1Q8TE04 598 aa15.43■□□□□ 0.06
TRIM49B-201ENST00000332682 CRBNQ96SW2 442 aa15.43■□□□□ 0.06
TRIM49B-201ENST00000332682 CHPF2Q9P2E5 772 aa15.43■□□□□ 0.06
TRIM49B-201ENST00000332682 BTAF1O14981 1849 aa15.43■□□□□ 0.06
TRIM49B-201ENST00000332682 CLUAP1Q96AJ1 413 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms