RNA–Protein interactions for RNA: ENST00000331134.10

NPLOC4-201, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPLOC4, Length 4,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-201ENST00000331134 SMARCE1Q969G3 411 aa22.22■■□□□ 1.15
NPLOC4-201ENST00000331134 HECW1Q76N89 1606 aa22.22■■□□□ 1.15
NPLOC4-201ENST00000331134 GTF2F1P35269 517 aaKnown RBP eCLIP22.22■■□□□ 1.153e-6■□□□□ 9.5
NPLOC4-201ENST00000331134 PLEKHO1Q53GL0 409 aaPredicted RBP22.22■■□□□ 1.15
NPLOC4-201ENST00000331134 TRIM34Q9BYJ4 488 aa22.22■■□□□ 1.15
NPLOC4-201ENST00000331134 DTNBO60941 627 aa22.22■■□□□ 1.15
NPLOC4-201ENST00000331134 USP48Q86UV5 1035 aa22.21■■□□□ 1.15
NPLOC4-201ENST00000331134 NUP133Q8WUM0 1156 aa22.21■■□□□ 1.15
NPLOC4-201ENST00000331134 TESK2Q96S53 571 aa22.21■■□□□ 1.15
NPLOC4-201ENST00000331134 ATAD2Q6PL18 1390 aa22.21■■□□□ 1.15
NPLOC4-201ENST00000331134 CCT2P78371 535 aaKnown RBP22.2■■□□□ 1.14
NPLOC4-201ENST00000331134 CCDC186Q7Z3E2 898 aa22.2■■□□□ 1.14
NPLOC4-201ENST00000331134 CCDC61Q9Y6R9 512 aa22.2■■□□□ 1.14
NPLOC4-201ENST00000331134 ABCC11Q96J66 1382 aa22.2■■□□□ 1.14
NPLOC4-201ENST00000331134 XBP1P17861 261 aa22.2■■□□□ 1.14
NPLOC4-201ENST00000331134 ZFP91Q96JP5 570 aaPredicted RBP22.2■■□□□ 1.14
NPLOC4-201ENST00000331134 PLB1Q6P1J6 1458 aa22.2■■□□□ 1.14
NPLOC4-201ENST00000331134 NUDT16Q96DE0 195 aaKnown RBP22.2■■□□□ 1.14
NPLOC4-201ENST00000331134 SART3Q15020 963 aaKnown RBP22.2■■□□□ 1.14
NPLOC4-201ENST00000331134 TBC1D2BQ9UPU7 963 aa22.2■■□□□ 1.14
NPLOC4-201ENST00000331134 SAMD1Q6SPF0 538 aaPredicted RBP22.19■■□□□ 1.14
NPLOC4-201ENST00000331134 ZNF692Q9BU19 519 aaPredicted RBP22.19■■□□□ 1.14
NPLOC4-201ENST00000331134 KLHL10Q6JEL2 608 aa22.19■■□□□ 1.14
NPLOC4-201ENST00000331134 SNX21Q969T3 373 aa22.19■■□□□ 1.14
NPLOC4-201ENST00000331134 SMC5Q8IY18 1101 aa22.18■■□□□ 1.14
NPLOC4-201ENST00000331134 CCDC82Q8N4S0 544 aa22.18■■□□□ 1.14
NPLOC4-201ENST00000331134 CENPHQ9H3R5 247 aa22.18■■□□□ 1.14
NPLOC4-201ENST00000331134 ZSWIM4Q9H7M6 989 aa22.18■■□□□ 1.14
NPLOC4-201ENST00000331134 BRMS1Q9HCU9 246 aa22.18■■□□□ 1.14
NPLOC4-201ENST00000331134 ANXA1P04083 346 aa22.18■■□□□ 1.14
NPLOC4-201ENST00000331134 UBE2HP62256 183 aa22.18■■□□□ 1.14
NPLOC4-201ENST00000331134 USHBP1Q8N6Y0 703 aa22.18■■□□□ 1.14
NPLOC4-201ENST00000331134 FAM69CQ0P6D2 419 aa22.18■■□□□ 1.14
NPLOC4-201ENST00000331134 PIBF1Q8WXW3 757 aa22.17■■□□□ 1.14
NPLOC4-201ENST00000331134 ESCO1Q5FWF5 840 aa22.17■■□□□ 1.14
NPLOC4-201ENST00000331134 TTC39AQ5SRH9 613 aa22.17■■□□□ 1.14
NPLOC4-201ENST00000331134 ANO10Q9NW15 660 aa22.17■■□□□ 1.14
NPLOC4-201ENST00000331134 ARHGAP29Q52LW3 1261 aa22.17■■□□□ 1.14
NPLOC4-201ENST00000331134 FLIIQ13045 1269 aa22.17■■□□□ 1.14
NPLOC4-201ENST00000331134 CCDC158Q5M9N0 1113 aa22.17■■□□□ 1.14
NPLOC4-201ENST00000331134 TSPYL6Q8N831 410 aa22.17■■□□□ 1.14
NPLOC4-201ENST00000331134 KDM2BQ8NHM5 1336 aa22.16■■□□□ 1.14
NPLOC4-201ENST00000331134 RBSNQ9H1K0 784 aa22.16■■□□□ 1.14
NPLOC4-201ENST00000331134 KRT32Q14532 448 aa22.16■■□□□ 1.14
NPLOC4-201ENST00000331134 BTBD11A6QL63 1104 aa22.16■■□□□ 1.14
NPLOC4-201ENST00000331134 ERLIN1O75477 346 aa22.16■■□□□ 1.14
NPLOC4-201ENST00000331134 C8orf58Q8NAV2 365 aa22.16■■□□□ 1.14
NPLOC4-201ENST00000331134 PRIMPOLQ96LW4 560 aa22.16■■□□□ 1.14
NPLOC4-201ENST00000331134 SH2B1Q9NRF2 756 aaPredicted RBP22.16■■□□□ 1.14
NPLOC4-201ENST00000331134 RNF123Q5XPI4 1314 aa22.16■■□□□ 1.14
NPLOC4-201ENST00000331134 CPLX3Q8WVH0 158 aa22.15■■□□□ 1.14
NPLOC4-201ENST00000331134 FSIP1Q8NA03 581 aa22.15■■□□□ 1.14
NPLOC4-201ENST00000331134 SLC52A1Q9NWF4 448 aa22.15■■□□□ 1.14
NPLOC4-201ENST00000331134 IBSPP21815 317 aaPredicted RBP22.15■■□□□ 1.14
NPLOC4-201ENST00000331134 KRT24Q2M2I5 525 aa22.15■■□□□ 1.14
NPLOC4-201ENST00000331134 RAB11FIP4Q86YS3 637 aa22.15■■□□□ 1.14
NPLOC4-201ENST00000331134 PDE1AP54750 535 aa22.14■■□□□ 1.14
NPLOC4-201ENST00000331134 CBFA2T2O43439 604 aa22.14■■□□□ 1.13
NPLOC4-201ENST00000331134 DNM1Q05193 864 aaKnown RBP22.14■■□□□ 1.13
NPLOC4-201ENST00000331134 TMC6Q7Z403 805 aa22.14■■□□□ 1.13
NPLOC4-201ENST00000331134 TRIM22Q8IYM9 498 aa22.14■■□□□ 1.13
NPLOC4-201ENST00000331134 C17orf53Q8N3J3 647 aaPredicted RBP22.14■■□□□ 1.13
NPLOC4-201ENST00000331134 CNNM1Q9NRU3 951 aa22.14■■□□□ 1.13
NPLOC4-201ENST00000331134 EIF3JO75822 258 aaKnown RBP22.14■■□□□ 1.13
NPLOC4-201ENST00000331134 HSP90AB3PQ58FF7 597 aa22.14■■□□□ 1.13
NPLOC4-201ENST00000331134 RDXP35241 583 aaKnown RBP22.13■■□□□ 1.13
NPLOC4-201ENST00000331134 AMOTL1Q8IY63 956 aa22.13■■□□□ 1.13
NPLOC4-201ENST00000331134 GNAT3A8MTJ3 354 aa22.13■■□□□ 1.13
NPLOC4-201ENST00000331134 PPP1R42Q7Z4L9 355 aa22.13■■□□□ 1.13
NPLOC4-201ENST00000331134 ZSCAN22P10073 491 aaPredicted RBP22.13■■□□□ 1.13
NPLOC4-201ENST00000331134 NOL10Q9BSC4 688 aaKnown RBP22.13■■□□□ 1.13
NPLOC4-201ENST00000331134 MAGEC2Q9UBF1 373 aaPredicted RBP22.13■■□□□ 1.13
NPLOC4-201ENST00000331134 SMTNL1A8MU46 457 aa22.12■■□□□ 1.13
NPLOC4-201ENST00000331134 ZBTB40Q9NUA8 1239 aa22.12■■□□□ 1.13
NPLOC4-201ENST00000331134 HSP90AA4PQ58FG1 418 aa22.12■■□□□ 1.13
NPLOC4-201ENST00000331134 CARD14Q9BXL6 1004 aa22.12■■□□□ 1.13
NPLOC4-201ENST00000331134 LRRC2Q9BYS8 371 aa22.12■■□□□ 1.13
NPLOC4-201ENST00000331134 ZNHIT6Q9NWK9 470 aaKnown RBP22.12■■□□□ 1.13
NPLOC4-201ENST00000331134 EPS15P42566 896 aa22.12■■□□□ 1.13
NPLOC4-201ENST00000331134 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP22.12■■□□□ 1.13
NPLOC4-201ENST00000331134 DACT1Q9NYF0 836 aa22.11■■□□□ 1.13
NPLOC4-201ENST00000331134 CEP126Q9P2H0 1117 aa22.11■■□□□ 1.13
NPLOC4-201ENST00000331134 KIF4BQ2VIQ3 1234 aa22.11■■□□□ 1.13
NPLOC4-201ENST00000331134 DDX19AQ9NUU7 478 aaKnown RBP22.11■■□□□ 1.13
NPLOC4-201ENST00000331134 EPB41L2O43491 1005 aaKnown RBP22.11■■□□□ 1.13
NPLOC4-201ENST00000331134 CDR1P51861 262 aa22.11■■□□□ 1.13
NPLOC4-201ENST00000331134 IDH1O75874 414 aaKnown RBP22.11■■□□□ 1.13
NPLOC4-201ENST00000331134 TOP1P11387 765 aaKnown RBP22.11■■□□□ 1.13
NPLOC4-201ENST00000331134 POLR3DP05423 398 aaPredicted RBP22.1■■□□□ 1.13
NPLOC4-201ENST00000331134 CEP135Q66GS9 1140 aa22.1■■□□□ 1.13
NPLOC4-201ENST00000331134 OTUD7AQ8TE49 926 aaPredicted RBP22.1■■□□□ 1.13
NPLOC4-201ENST00000331134 TSC1Q92574 1164 aa22.1■■□□□ 1.13
NPLOC4-201ENST00000331134 TMX4Q9H1E5 349 aaPredicted RBP22.1■■□□□ 1.13
NPLOC4-201ENST00000331134 ANO6Q4KMQ2 910 aa22.1■■□□□ 1.13
NPLOC4-201ENST00000331134 DEF6Q9H4E7 631 aa22.1■■□□□ 1.13
NPLOC4-201ENST00000331134 CCDC141Q6ZP82 1450 aa22.1■■□□□ 1.13
NPLOC4-201ENST00000331134 KIF2AO00139 706 aaPredicted RBP22.09■■□□□ 1.13
NPLOC4-201ENST00000331134 C8orf76Q96K31 380 aa22.09■■□□□ 1.13
NPLOC4-201ENST00000331134 DNAJC5BQ9UF47 199 aa22.09■■□□□ 1.13
NPLOC4-201ENST00000331134 ESYT1Q9BSJ8 1104 aa22.09■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms