RNA–Protein interactions for RNA: ENST00000330871.3

SOCS3-201, Transcript of suppressor of cytokine signaling 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOCS3, Length 2,734 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOCS3-201ENST00000330871 GIMAP6Q6P9H5 292 aa21.96■■□□□ 1.11
SOCS3-201ENST00000330871 DCTPP1Q9H773 170 aa21.96■■□□□ 1.11
SOCS3-201ENST00000330871 SLC52A1Q9NWF4 448 aa21.96■■□□□ 1.11
SOCS3-201ENST00000330871 PTPRMP28827 1452 aa21.96■■□□□ 1.11
SOCS3-201ENST00000330871 IFT57Q9NWB7 429 aa21.95■■□□□ 1.1
SOCS3-201ENST00000330871 ERC2O15083 957 aa21.95■■□□□ 1.1
SOCS3-201ENST00000330871 CNPY2Q9Y2B0 182 aa21.95■■□□□ 1.1
SOCS3-201ENST00000330871 REREQ9P2R6 1566 aa21.95■■□□□ 1.1
SOCS3-201ENST00000330871 TCHHQ07283 1943 aa21.94■■□□□ 1.1
SOCS3-201ENST00000330871 PHACTR3Q96KR7 559 aa21.94■■□□□ 1.1
SOCS3-201ENST00000330871 CABP1Q9NZU7 370 aa21.94■■□□□ 1.1
SOCS3-201ENST00000330871 POLKQ9UBT6 870 aa21.94■■□□□ 1.1
SOCS3-201ENST00000330871 MX1P20591 662 aa21.94■■□□□ 1.1
SOCS3-201ENST00000330871 TERF2Q15554 542 aa21.94■■□□□ 1.1
SOCS3-201ENST00000330871 PTGS1P23219 599 aa21.93■■□□□ 1.1
SOCS3-201ENST00000330871 CDK19Q9BWU1 502 aa21.93■■□□□ 1.1
SOCS3-201ENST00000330871 SENP3Q9H4L4 574 aaPredicted RBP21.93■■□□□ 1.1
SOCS3-201ENST00000330871 PALD1Q9ULE6 856 aa21.93■■□□□ 1.1
SOCS3-201ENST00000330871 CUL4AQ13619 759 aa21.93■■□□□ 1.1
SOCS3-201ENST00000330871 API5Q9BZZ5 524 aaKnown RBP21.93■■□□□ 1.1
SOCS3-201ENST00000330871 TRERF1Q96PN7 1200 aa21.92■■□□□ 1.1
SOCS3-201ENST00000330871 HMOX1P09601 288 aa21.92■■□□□ 1.1
SOCS3-201ENST00000330871 ZNF853P0CG23 659 aa21.92■■□□□ 1.1
SOCS3-201ENST00000330871 CHMP4AQ9BY43 222 aa21.92■■□□□ 1.1
SOCS3-201ENST00000330871 YTHDC2Q9H6S0 1430 aaKnown RBP21.91■■□□□ 1.1
SOCS3-201ENST00000330871 CCDC66A2RUB6 948 aa21.91■■□□□ 1.1
SOCS3-201ENST00000330871 TWISTNBQ3B726 338 aaPredicted RBP21.91■■□□□ 1.1
SOCS3-201ENST00000330871 MBIPQ9NS73 344 aa21.91■■□□□ 1.1
SOCS3-201ENST00000330871 CLTCQ00610 1675 aaKnown RBP21.91■■□□□ 1.1
SOCS3-201ENST00000330871 KIF18AQ8NI77 898 aa21.91■■□□□ 1.1
SOCS3-201ENST00000330871 TIGD1Q96MW7 591 aa21.91■■□□□ 1.1
SOCS3-201ENST00000330871 UPF3BQ9BZI7 483 aaKnown RBP21.91■■□□□ 1.1
SOCS3-201ENST00000330871 SRCIN1Q9C0H9 1055 aa21.91■■□□□ 1.1
SOCS3-201ENST00000330871 MORC2Q9Y6X9 1032 aaPredicted RBP21.9■■□□□ 1.1
SOCS3-201ENST00000330871 LRMPQ12912 555 aa21.9■■□□□ 1.1
SOCS3-201ENST00000330871 NPM1P06748 294 aaKnown RBP eCLIP21.89■■□□□ 1.1
SOCS3-201ENST00000330871 FBLN1P23142 703 aa21.89■■□□□ 1.1
SOCS3-201ENST00000330871 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.89■■□□□ 1.09
SOCS3-201ENST00000330871 FIBPO43427 364 aa21.88■■□□□ 1.09
SOCS3-201ENST00000330871 ST7Q9NRC1 585 aa21.88■■□□□ 1.09
SOCS3-201ENST00000330871 KIF24Q5T7B8 1368 aa21.88■■□□□ 1.09
SOCS3-201ENST00000330871 TNNT1P13805 278 aa21.87■■□□□ 1.09
SOCS3-201ENST00000330871 WDR33Q9C0J8 1336 aaKnown RBP21.87■■□□□ 1.09
SOCS3-201ENST00000330871 SMTNL1A8MU46 457 aa21.87■■□□□ 1.09
SOCS3-201ENST00000330871 CAPN2P17655 700 aa21.87■■□□□ 1.09
SOCS3-201ENST00000330871 TSHZ3Q63HK5 1081 aa21.87■■□□□ 1.09
SOCS3-201ENST00000330871 NOL12Q9UGY1 213 aaKnown RBP eCLIP21.87■■□□□ 1.09
SOCS3-201ENST00000330871 V9GYY5 206 aaPredicted RBP21.87■■□□□ 1.09
SOCS3-201ENST00000330871 KNDC1Q76NI1 1749 aa21.87■■□□□ 1.09
SOCS3-201ENST00000330871 KIF20BQ96Q89 1820 aa21.87■■□□□ 1.09
SOCS3-201ENST00000330871 GOLGA6L6A8MZA4 724 aa21.86■■□□□ 1.09
SOCS3-201ENST00000330871 MCM2P49736 904 aa21.86■■□□□ 1.09
SOCS3-201ENST00000330871 KRT222Q8N1A0 295 aa21.86■■□□□ 1.09
SOCS3-201ENST00000330871 INTS4Q96HW7 963 aaKnown RBP21.86■■□□□ 1.09
SOCS3-201ENST00000330871 FUCA2Q9BTY2 467 aa21.86■■□□□ 1.09
SOCS3-201ENST00000330871 LMOD3Q0VAK6 560 aa21.86■■□□□ 1.09
SOCS3-201ENST00000330871 C8orf58Q8NAV2 365 aa21.86■■□□□ 1.09
SOCS3-201ENST00000330871 ZNF592Q92610 1267 aa21.86■■□□□ 1.09
SOCS3-201ENST00000330871 ARHGEF40Q8TER5 1519 aa21.86■■□□□ 1.09
SOCS3-201ENST00000330871 DTNBO60941 627 aa21.86■■□□□ 1.09
SOCS3-201ENST00000330871 TPM3P06753 285 aa21.86■■□□□ 1.09
SOCS3-201ENST00000330871 TAF7LQ5H9L4 462 aa21.86■■□□□ 1.09
SOCS3-201ENST00000330871 CCDC186Q7Z3E2 898 aa21.85■■□□□ 1.09
SOCS3-201ENST00000330871 CCDC112Q8NEF3 446 aa21.85■■□□□ 1.09
SOCS3-201ENST00000330871 DNAJC2Q99543 621 aaKnown RBP21.85■■□□□ 1.09
SOCS3-201ENST00000330871 IL13P35225 146 aa21.84■■□□□ 1.09
SOCS3-201ENST00000330871 PAXIP1Q6ZW49 1069 aaPredicted RBP21.84■■□□□ 1.09
SOCS3-201ENST00000330871 NRBP1Q9UHY1 535 aa21.84■■□□□ 1.09
SOCS3-201ENST00000330871 SYCP1Q15431 976 aa21.84■■□□□ 1.09
SOCS3-201ENST00000330871 UBE2HP62256 183 aa21.83■■□□□ 1.09
SOCS3-201ENST00000330871 KMT5BQ4FZB7 885 aa21.83■■□□□ 1.09
SOCS3-201ENST00000330871 CERS3Q8IU89 383 aa21.83■■□□□ 1.09
SOCS3-201ENST00000330871 ANKRD44Q8N8A2 993 aa21.82■■□□□ 1.08
SOCS3-201ENST00000330871 ANO2Q9NQ90 1003 aa21.82■■□□□ 1.08
SOCS3-201ENST00000330871 TRIM6-TRIM34B2RNG4 842 aa21.82■■□□□ 1.08
SOCS3-201ENST00000330871 RAPGEF3O95398 923 aa21.82■■□□□ 1.08
SOCS3-201ENST00000330871 DRC7Q8IY82 874 aa21.82■■□□□ 1.08
SOCS3-201ENST00000330871 TMEM87AQ8NBN3 555 aa21.82■■□□□ 1.08
SOCS3-201ENST00000330871 LARP6Q9BRS8 491 aaKnown RBP21.82■■□□□ 1.08
SOCS3-201ENST00000330871 TRIM34Q9BYJ4 488 aa21.82■■□□□ 1.08
SOCS3-201ENST00000330871 EMILIN1Q9Y6C2 1016 aa21.82■■□□□ 1.08
SOCS3-201ENST00000330871 RPAP1Q9BWH6 1393 aaPredicted RBP21.81■■□□□ 1.08
SOCS3-201ENST00000330871 KRT24Q2M2I5 525 aa21.81■■□□□ 1.08
SOCS3-201ENST00000330871 YEATS2Q9ULM3 1422 aa21.81■■□□□ 1.08
SOCS3-201ENST00000330871 AEBP2Q6ZN18 517 aaPredicted RBP21.8■■□□□ 1.08
SOCS3-201ENST00000330871 RPAP2Q8IXW5 612 aaPredicted RBP21.8■■□□□ 1.08
SOCS3-201ENST00000330871 CEP85Q6P2H3 762 aa21.8■■□□□ 1.08
SOCS3-201ENST00000330871 ATP7BP35670 1465 aa21.79■■□□□ 1.08
SOCS3-201ENST00000330871 MAP2P11137 1827 aaKnown RBP21.79■■□□□ 1.08
SOCS3-201ENST00000330871 TPD52L1Q16890 204 aaPredicted RBP21.79■■□□□ 1.08
SOCS3-201ENST00000330871 LUZP1Q86V48 1076 aa21.79■■□□□ 1.08
SOCS3-201ENST00000330871 CALCOCO1Q9P1Z2 691 aa21.79■■□□□ 1.08
SOCS3-201ENST00000330871 CHMP3Q9Y3E7 222 aa21.79■■□□□ 1.08
SOCS3-201ENST00000330871 TMEM131LA2VDJ0 1609 aa21.79■■□□□ 1.08
SOCS3-201ENST00000330871 MCCP23508 829 aa21.79■■□□□ 1.08
SOCS3-201ENST00000330871 RTF1Q92541 710 aaKnown RBP21.79■■□□□ 1.08
SOCS3-201ENST00000330871 ESYT1Q9BSJ8 1104 aa21.79■■□□□ 1.08
SOCS3-201ENST00000330871 MYO5BQ9ULV0 1848 aa21.78■■□□□ 1.08
SOCS3-201ENST00000330871 TULP2O00295 520 aa21.78■■□□□ 1.08
SOCS3-201ENST00000330871 RTL1A6NKG5 1358 aa21.78■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms