RNA–Protein interactions for RNA: ENST00000330852.9

RAB28-202, Transcript of RAB28, member RAS oncogene family, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RAB28, Length 1,715 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-202ENST00000330852 MTHFSP49914 203 aa24.58■■□□□ 1.53
RAB28-202ENST00000330852 AEBP1Q8IUX7 1158 aa24.58■■□□□ 1.53
RAB28-202ENST00000330852 KLHL34Q8N239 644 aa24.58■■□□□ 1.52
RAB28-202ENST00000330852 CABP4P57796 275 aa24.57■■□□□ 1.52
RAB28-202ENST00000330852 LINC00116Q8NCU8 138 aa24.57■■□□□ 1.52
RAB28-202ENST00000330852 KDM6AO15550 1401 aaPredicted RBP24.56■■□□□ 1.52
RAB28-202ENST00000330852 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.55■■□□□ 1.52
RAB28-202ENST00000330852 ITPK1Q13572 414 aa24.55■■□□□ 1.52
RAB28-202ENST00000330852 GPR162Q16538 588 aa24.55■■□□□ 1.52
RAB28-202ENST00000330852 MSL1Q68DK7 614 aa24.55■■□□□ 1.52
RAB28-202ENST00000330852 SCN11AQ9UI33 1791 aa24.54■■□□□ 1.52
RAB28-202ENST00000330852 CD2APQ9Y5K6 639 aa24.53■■□□□ 1.52
RAB28-202ENST00000330852 CC2D1BQ5T0F9 858 aaKnown RBP24.52■■□□□ 1.52
RAB28-202ENST00000330852 GNPATO15228 680 aa24.52■■□□□ 1.52
RAB28-202ENST00000330852 RC3H1Q5TC82 1133 aaKnown RBP24.52■■□□□ 1.52
RAB28-202ENST00000330852 DIAPH1O60610 1272 aaKnown RBP24.51■■□□□ 1.51
RAB28-202ENST00000330852 PHF14O94880 888 aa24.51■■□□□ 1.51
RAB28-202ENST00000330852 AKAP4Q5JQC9 854 aa24.51■■□□□ 1.51
RAB28-202ENST00000330852 AMIGO3Q86WK7 504 aa24.51■■□□□ 1.51
RAB28-202ENST00000330852 COL5A3P25940 1745 aaPredicted RBP24.5■■□□□ 1.51
RAB28-202ENST00000330852 NLGN2Q8NFZ4 835 aa24.5■■□□□ 1.51
RAB28-202ENST00000330852 RBM42Q9BTD8 480 aaKnown RBP24.5■■□□□ 1.51
RAB28-202ENST00000330852 RTCBQ9Y3I0 505 aaKnown RBP24.49■■□□□ 1.51
RAB28-202ENST00000330852 CNTNAP4Q9C0A0 1308 aa24.48■■□□□ 1.51
RAB28-202ENST00000330852 ADRA2BP18089 450 aa24.48■■□□□ 1.51
RAB28-202ENST00000330852 NFATC2IPQ8NCF5 419 aa24.48■■□□□ 1.51
RAB28-202ENST00000330852 SLC4A9Q96Q91 983 aa24.48■■□□□ 1.51
RAB28-202ENST00000330852 VIRMAQ69YN4 1812 aaKnown RBP24.48■■□□□ 1.51
RAB28-202ENST00000330852 GRIN3BO60391 1043 aa24.47■■□□□ 1.51
RAB28-202ENST00000330852 TRAPPC3LQ5T215 181 aa24.47■■□□□ 1.51
RAB28-202ENST00000330852 CICQ96RK0 1608 aaPredicted RBP24.45■■□□□ 1.5
RAB28-202ENST00000330852 MYH14Q7Z406 1995 aaKnown RBP24.44■■□□□ 1.5
RAB28-202ENST00000330852 HMOX1P09601 288 aa24.44■■□□□ 1.5
RAB28-202ENST00000330852 PELP1Q8IZL8 1130 aaKnown RBP24.44■■□□□ 1.5
RAB28-202ENST00000330852 UTRNP46939 3433 aa24.44■■□□□ 1.5
RAB28-202ENST00000330852 RPS6KA4O75676 772 aa24.44■■□□□ 1.5
RAB28-202ENST00000330852 SMIM5Q71RC9 77 aa24.44■■□□□ 1.5
RAB28-202ENST00000330852 ZNF784Q8NCA9 323 aaPredicted RBP24.44■■□□□ 1.5
RAB28-202ENST00000330852 PTCD1O75127 700 aaKnown RBP24.42■■□□□ 1.5
RAB28-202ENST00000330852 NLGN1Q8N2Q7 840 aa24.42■■□□□ 1.5
RAB28-202ENST00000330852 SLC52A2Q9HAB3 445 aa24.42■■□□□ 1.5
RAB28-202ENST00000330852 COL3A1P02461 1466 aaPredicted RBP24.41■■□□□ 1.5
RAB28-202ENST00000330852 ADAMTS7Q9UKP4 1686 aa24.41■■□□□ 1.5
RAB28-202ENST00000330852 MRC1P22897 1456 aa24.41■■□□□ 1.5
RAB28-202ENST00000330852 RNMTO43148 476 aaKnown RBP24.4■■□□□ 1.5
RAB28-202ENST00000330852 MTHFSDQ2M296 383 aaKnown RBP24.39■■□□□ 1.5
RAB28-202ENST00000330852 ARHGEF1Q92888 912 aaKnown RBP24.39■■□□□ 1.5
RAB28-202ENST00000330852 YBX3P16989 372 aaKnown RBP eCLIP24.38■■□□□ 1.49
RAB28-202ENST00000330852 RFC4P35249 363 aa24.38■■□□□ 1.49
RAB28-202ENST00000330852 LGR6Q9HBX8 967 aa24.38■■□□□ 1.49
RAB28-202ENST00000330852 TJP1Q07157 1748 aa24.38■■□□□ 1.49
RAB28-202ENST00000330852 MMP10P09238 476 aa24.37■■□□□ 1.49
RAB28-202ENST00000330852 CFAP53Q96M91 514 aa24.37■■□□□ 1.49
RAB28-202ENST00000330852 KIF13BQ9NQT8 1826 aa24.37■■□□□ 1.49
RAB28-202ENST00000330852 CRKLP46109 303 aaKnown RBP24.36■■□□□ 1.49
RAB28-202ENST00000330852 C4AP0C0L4 1744 aa24.36■■□□□ 1.49
RAB28-202ENST00000330852 U2SURPO15042 1029 aaKnown RBP24.35■■□□□ 1.49
RAB28-202ENST00000330852 CNGB1Q14028 1251 aaPredicted RBP24.34■■□□□ 1.49
RAB28-202ENST00000330852 GAS2L2Q8NHY3 880 aa24.34■■□□□ 1.49
RAB28-202ENST00000330852 GOLGB1Q14789 3259 aaKnown RBP24.33■■□□□ 1.49
RAB28-202ENST00000330852 GYS1P13807 737 aa24.33■■□□□ 1.49
RAB28-202ENST00000330852 VSIG10Q8N0Z9 540 aa24.32■■□□□ 1.48
RAB28-202ENST00000330852 NUDCQ9Y266 331 aa24.32■■□□□ 1.48
RAB28-202ENST00000330852 GNAT3A8MTJ3 354 aa24.3■■□□□ 1.48
RAB28-202ENST00000330852 TGFB2P61812 414 aa24.3■■□□□ 1.48
RAB28-202ENST00000330852 INTS5Q6P9B9 1019 aaKnown RBP24.3■■□□□ 1.48
RAB28-202ENST00000330852 UBR2Q8IWV8 1755 aa24.3■■□□□ 1.48
RAB28-202ENST00000330852 CCDC87Q9NVE4 849 aa24.3■■□□□ 1.48
RAB28-202ENST00000330852 PARP3Q9Y6F1 533 aa24.3■■□□□ 1.48
RAB28-202ENST00000330852 KCPQ6ZWJ8 1503 aa24.29■■□□□ 1.48
RAB28-202ENST00000330852 DNAJC10Q8IXB1 793 aa24.29■■□□□ 1.48
RAB28-202ENST00000330852 USP42Q9H9J4 1324 aaKnown RBP24.28■■□□□ 1.48
RAB28-202ENST00000330852 SLC39A6Q13433 755 aa24.28■■□□□ 1.48
RAB28-202ENST00000330852 CYP19A1P11511 503 aaPredicted RBP24.27■■□□□ 1.48
RAB28-202ENST00000330852 C10orf71Q711Q0 1435 aa24.27■■□□□ 1.48
RAB28-202ENST00000330852 PPP2R1AP30153 589 aa24.27■■□□□ 1.48
RAB28-202ENST00000330852 TEFQ10587 303 aa24.27■■□□□ 1.48
RAB28-202ENST00000330852 SIPA1L3O60292 1781 aaPredicted RBP24.26■■□□□ 1.47
RAB28-202ENST00000330852 TTC5Q8N0Z6 440 aa24.26■■□□□ 1.47
RAB28-202ENST00000330852 IL17REQ8NFR9 667 aa24.25■■□□□ 1.47
RAB28-202ENST00000330852 RSPH6AQ9H0K4 717 aa24.25■■□□□ 1.47
RAB28-202ENST00000330852 KIAA1551Q9HCM1 1747 aa24.25■■□□□ 1.47
RAB28-202ENST00000330852 SOS1Q07889 1333 aaPredicted RBP24.25■■□□□ 1.47
RAB28-202ENST00000330852 PXDNLA1KZ92 1463 aa24.24■■□□□ 1.47
RAB28-202ENST00000330852 N4BP2Q86UW6 1770 aaPredicted RBP24.24■■□□□ 1.47
RAB28-202ENST00000330852 ZPR1O75312 459 aa24.24■■□□□ 1.47
RAB28-202ENST00000330852 PRKAR2BP31323 418 aa24.24■■□□□ 1.47
RAB28-202ENST00000330852 TEX13AQ9BXU3 409 aaPredicted RBP24.23■■□□□ 1.47
RAB28-202ENST00000330852 SRP68Q9UHB9 627 aaKnown RBP24.23■■□□□ 1.47
RAB28-202ENST00000330852 FCHSD2O94868 740 aa24.22■■□□□ 1.47
RAB28-202ENST00000330852 STARD3NLO95772 234 aa24.22■■□□□ 1.47
RAB28-202ENST00000330852 FKBP8Q14318 412 aa24.22■■□□□ 1.47
RAB28-202ENST00000330852 CEMIPQ8WUJ3 1361 aa24.21■■□□□ 1.47
RAB28-202ENST00000330852 ZNF790Q6PG37 636 aa24.21■■□□□ 1.47
RAB28-202ENST00000330852 PHACTR3Q96KR7 559 aa24.21■■□□□ 1.47
RAB28-202ENST00000330852 NARFQ9UHQ1 456 aa24.21■■□□□ 1.47
RAB28-202ENST00000330852 BRCA1P38398 1863 aaKnown RBP24.21■■□□□ 1.47
RAB28-202ENST00000330852 U2AF1L5P0DN76 240 aaPredicted RBP24.2■■□□□ 1.46
RAB28-202ENST00000330852 U2AF1Q01081 240 aaKnown RBP eCLIP24.2■■□□□ 1.46
RAB28-202ENST00000330852 TM4SF1P30408 202 aa24.19■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms