RNA–Protein interactions for RNA: ENST00000330394.2

EPHB3-201, Transcript of EPH receptor B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPHB3, Length 4,236 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3-201ENST00000330394 PKP1Q13835 747 aa16.57■□□□□ 0.24
EPHB3-201ENST00000330394 SFPQP23246 707 aaKnown RBP eCLIP16.57■□□□□ 0.24
EPHB3-201ENST00000330394 ANTXR1Q9H6X2 564 aa16.57■□□□□ 0.24
EPHB3-201ENST00000330394 DNM1Q05193 864 aaKnown RBP16.57■□□□□ 0.24
EPHB3-201ENST00000330394 TMCO3Q6UWJ1 677 aa16.57■□□□□ 0.24
EPHB3-201ENST00000330394 BBXQ8WY36 941 aaPredicted RBP16.57■□□□□ 0.24
EPHB3-201ENST00000330394 SCAND2PQ9GZW5 306 aaPredicted RBP16.57■□□□□ 0.24
EPHB3-201ENST00000330394 FSD2A1L4K1 749 aa16.56■□□□□ 0.24
EPHB3-201ENST00000330394 CCDC70Q6NSX1 233 aa16.56■□□□□ 0.24
EPHB3-201ENST00000330394 MAGI3Q5TCQ9 1506 aa16.56■□□□□ 0.24
EPHB3-201ENST00000330394 CLSTN1O94985 981 aa16.56■□□□□ 0.24
EPHB3-201ENST00000330394 TRHP20396 242 aaPredicted RBP16.56■□□□□ 0.24
EPHB3-201ENST00000330394 CFAP100Q494V2 611 aa16.56■□□□□ 0.24
EPHB3-201ENST00000330394 ANKRD20A12PQ8NF67 263 aa16.56■□□□□ 0.24
EPHB3-201ENST00000330394 KIF1BPQ96EK5 621 aa16.56■□□□□ 0.24
EPHB3-201ENST00000330394 ZFP91Q96JP5 570 aaPredicted RBP16.56■□□□□ 0.24
EPHB3-201ENST00000330394 USP26Q9BXU7 913 aa16.56■□□□□ 0.24
EPHB3-201ENST00000330394 BIN1O00499 593 aa16.56■□□□□ 0.24
EPHB3-201ENST00000330394 UVSSAQ2YD98 709 aa16.56■□□□□ 0.24
EPHB3-201ENST00000330394 HIP1O00291 1037 aa16.55■□□□□ 0.24
EPHB3-201ENST00000330394 SAFBQ15424 915 aaKnown RBP eCLIP16.55■□□□□ 0.24
EPHB3-201ENST00000330394 ATAD2Q6PL18 1390 aa16.55■□□□□ 0.24
EPHB3-201ENST00000330394 ZSCAN22P10073 491 aaPredicted RBP16.55■□□□□ 0.24
EPHB3-201ENST00000330394 TMEM63CQ9P1W3 806 aa16.55■□□□□ 0.24
EPHB3-201ENST00000330394 CCDC8Q9H0W5 538 aaPredicted RBP16.55■□□□□ 0.24
EPHB3-201ENST00000330394 GLRX3O76003 335 aaKnown RBP16.54■□□□□ 0.24
EPHB3-201ENST00000330394 PTGS1P23219 599 aa16.54■□□□□ 0.24
EPHB3-201ENST00000330394 LRRFIP1Q32MZ4 808 aaKnown RBP16.54■□□□□ 0.24
EPHB3-201ENST00000330394 AXDND1Q5T1B0 1012 aaPredicted RBP16.54■□□□□ 0.24
EPHB3-201ENST00000330394 MRPL50Q8N5N7 158 aaKnown RBP16.54■□□□□ 0.24
EPHB3-201ENST00000330394 AK7Q96M32 723 aa16.54■□□□□ 0.24
EPHB3-201ENST00000330394 KDM6BO15054 1643 aa16.54■□□□□ 0.24
EPHB3-201ENST00000330394 LAMC3Q9Y6N6 1575 aa16.54■□□□□ 0.24
EPHB3-201ENST00000330394 H0YHG0 523 aa16.54■□□□□ 0.24
EPHB3-201ENST00000330394 FYB1O15117 783 aa16.54■□□□□ 0.24
EPHB3-201ENST00000330394 VAMP4O75379 141 aa16.54■□□□□ 0.24
EPHB3-201ENST00000330394 ANKRD44Q8N8A2 993 aa16.54■□□□□ 0.24
EPHB3-201ENST00000330394 ESYT1Q9BSJ8 1104 aa16.54■□□□□ 0.24
EPHB3-201ENST00000330394 ACBD3Q9H3P7 528 aa16.54■□□□□ 0.24
EPHB3-201ENST00000330394 LMBRD1Q9NUN5 540 aa16.54■□□□□ 0.24
EPHB3-201ENST00000330394 ZMYM4Q5VZL5 1548 aa16.54■□□□□ 0.24
EPHB3-201ENST00000330394 ATP10BO94823 1461 aa16.54■□□□□ 0.24
EPHB3-201ENST00000330394 TCOF1Q13428 1488 aaKnown RBP16.54■□□□□ 0.24
EPHB3-201ENST00000330394 POLR3AO14802 1390 aaPredicted RBP16.54■□□□□ 0.24
EPHB3-201ENST00000330394 ISM2Q6H9L7 571 aa16.53■□□□□ 0.24
EPHB3-201ENST00000330394 TAF7Q15545 349 aaPredicted RBP16.53■□□□□ 0.24
EPHB3-201ENST00000330394 DACT1Q9NYF0 836 aa16.53■□□□□ 0.24
EPHB3-201ENST00000330394 ZBTB7BO15156 539 aaPredicted RBP16.53■□□□□ 0.24
EPHB3-201ENST00000330394 FAM69CQ0P6D2 419 aa16.53■□□□□ 0.24
EPHB3-201ENST00000330394 CEP135Q66GS9 1140 aa16.53■□□□□ 0.24
EPHB3-201ENST00000330394 ERC1Q8IUD2 1116 aa16.53■□□□□ 0.24
EPHB3-201ENST00000330394 PHACTR3Q96KR7 559 aa16.53■□□□□ 0.24
EPHB3-201ENST00000330394 RUFY1Q96T51 708 aa16.53■□□□□ 0.24
EPHB3-201ENST00000330394 ANO6Q4KMQ2 910 aa16.52■□□□□ 0.24
EPHB3-201ENST00000330394 ABTB2Q8N961 1025 aa16.52■□□□□ 0.24
EPHB3-201ENST00000330394 CAGE1Q8TC20 777 aa16.52■□□□□ 0.24
EPHB3-201ENST00000330394 DCTPP1Q9H773 170 aa16.52■□□□□ 0.24
EPHB3-201ENST00000330394 CD2BP2O95400 341 aaKnown RBP16.52■□□□□ 0.24
EPHB3-201ENST00000330394 CPA1P15085 419 aa16.52■□□□□ 0.24
EPHB3-201ENST00000330394 NAP1L1P55209 391 aaKnown RBP16.52■□□□□ 0.24
EPHB3-201ENST00000330394 ZNF445P59923 1031 aa16.52■□□□□ 0.24
EPHB3-201ENST00000330394 IL16Q14005 1332 aa16.52■□□□□ 0.23
EPHB3-201ENST00000330394 RTEL1-TNFRSF6BF6WH68 1400 aa16.52■□□□□ 0.23
EPHB3-201ENST00000330394 PIK3C2GO75747 1445 aa16.52■□□□□ 0.23
EPHB3-201ENST00000330394 U2AF2P26368 475 aaKnown RBP eCLIP16.52■□□□□ 0.23
EPHB3-201ENST00000330394 FLIIQ13045 1269 aa16.52■□□□□ 0.23
EPHB3-201ENST00000330394 MYL6BP14649 208 aa16.51■□□□□ 0.23
EPHB3-201ENST00000330394 CCDC102AQ96A19 550 aa16.51■□□□□ 0.23
EPHB3-201ENST00000330394 TAF3Q5VWG9 929 aa16.51■□□□□ 0.23
EPHB3-201ENST00000330394 ARHGAP45Q92619 1136 aa16.51■□□□□ 0.23
EPHB3-201ENST00000330394 SH2B1Q9NRF2 756 aaPredicted RBP16.51■□□□□ 0.23
EPHB3-201ENST00000330394 CCP110O43303 1012 aa16.51■□□□□ 0.23
EPHB3-201ENST00000330394 PSME1Q06323 249 aa16.51■□□□□ 0.23
EPHB3-201ENST00000330394 OSCARQ8IYS5 282 aa16.51■□□□□ 0.23
EPHB3-201ENST00000330394 DNAJC25Q9H1X3 360 aa16.51■□□□□ 0.23
EPHB3-201ENST00000330394 ZSWIM4Q9H7M6 989 aa16.51■□□□□ 0.23
EPHB3-201ENST00000330394 NOS1P29475 1434 aa16.5■□□□□ 0.23
EPHB3-201ENST00000330394 BLMP54132 1417 aaPredicted RBP16.5■□□□□ 0.23
EPHB3-201ENST00000330394 ANXA1P04083 346 aa16.5■□□□□ 0.23
EPHB3-201ENST00000330394 CCT2P78371 535 aaKnown RBP16.5■□□□□ 0.23
EPHB3-201ENST00000330394 ERBB4Q15303 1308 aa16.5■□□□□ 0.23
EPHB3-201ENST00000330394 GADD45BO75293 160 aaPredicted RBP16.5■□□□□ 0.23
EPHB3-201ENST00000330394 LUZP1Q86V48 1076 aa16.5■□□□□ 0.23
EPHB3-201ENST00000330394 FAM200AQ8TCP9 573 aa16.5■□□□□ 0.23
EPHB3-201ENST00000330394 CCDC61Q9Y6R9 512 aa16.5■□□□□ 0.23
EPHB3-201ENST00000330394 RRP12Q5JTH9 1297 aaKnown RBP16.5■□□□□ 0.23
EPHB3-201ENST00000330394 NUDT16Q96DE0 195 aaKnown RBP16.5■□□□□ 0.23
EPHB3-201ENST00000330394 ANO10Q9NW15 660 aa16.5■□□□□ 0.23
EPHB3-201ENST00000330394 SKILP12757 684 aa16.49■□□□□ 0.23
EPHB3-201ENST00000330394 FAM193AP78312 1265 aa16.49■□□□□ 0.23
EPHB3-201ENST00000330394 IDI1Q13907 227 aa16.49■□□□□ 0.23
EPHB3-201ENST00000330394 FBXO31Q5XUX0 539 aaPredicted RBP16.49■□□□□ 0.23
EPHB3-201ENST00000330394 PPP1R42Q7Z4L9 355 aa16.49■□□□□ 0.23
EPHB3-201ENST00000330394 DDX19AQ9NUU7 478 aaKnown RBP16.49■□□□□ 0.23
EPHB3-201ENST00000330394 TMC6Q7Z403 805 aa16.49■□□□□ 0.23
EPHB3-201ENST00000330394 SMAP1Q8IYB5 467 aaPredicted RBP16.49■□□□□ 0.23
EPHB3-201ENST00000330394 USP19O94966 1318 aa16.49■□□□□ 0.23
EPHB3-201ENST00000330394 MARCH6O60337 910 aa16.49■□□□□ 0.23
EPHB3-201ENST00000330394 FAM173BQ6P4H8 233 aa16.49■□□□□ 0.23
EPHB3-201ENST00000330394 KRT222Q8N1A0 295 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms