RNA–Protein interactions for RNA: ENST00000329970.7

GTF3C6-201, Transcript of general transcription factor IIIC subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C6, Length 952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C6-201ENST00000329970 SSFA2P28290 1259 aa18.46■□□□□ 0.55
GTF3C6-201ENST00000329970 SULT6B1Q6IMI4 303 aa18.46■□□□□ 0.55
GTF3C6-201ENST00000329970 ZNF530Q6P9A1 599 aaPredicted RBP18.46■□□□□ 0.55
GTF3C6-201ENST00000329970 AEBP1Q8IUX7 1158 aa18.46■□□□□ 0.55
GTF3C6-201ENST00000329970 ADAMTS7Q9UKP4 1686 aa18.45■□□□□ 0.54
GTF3C6-201ENST00000329970 MTHFSP49914 203 aa18.45■□□□□ 0.54
GTF3C6-201ENST00000329970 MSH5O43196 834 aa18.44■□□□□ 0.54
GTF3C6-201ENST00000329970 C1orf141Q5JVX7 400 aa18.44■□□□□ 0.54
GTF3C6-201ENST00000329970 LINC00116Q8NCU8 138 aa18.44■□□□□ 0.54
GTF3C6-201ENST00000329970 MYH14Q7Z406 1995 aaKnown RBP18.43■□□□□ 0.54
GTF3C6-201ENST00000329970 ATP6V1AP38606 617 aa18.43■□□□□ 0.54
GTF3C6-201ENST00000329970 ITPK1Q13572 414 aa18.43■□□□□ 0.54
GTF3C6-201ENST00000329970 GOLGB1Q14789 3259 aaKnown RBP18.43■□□□□ 0.54
GTF3C6-201ENST00000329970 COL3A1P02461 1466 aaPredicted RBP18.42■□□□□ 0.54
GTF3C6-201ENST00000329970 MRC1P22897 1456 aa18.42■□□□□ 0.54
GTF3C6-201ENST00000329970 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.42■□□□□ 0.54
GTF3C6-201ENST00000329970 AMIGO3Q86WK7 504 aa18.42■□□□□ 0.54
GTF3C6-201ENST00000329970 TJP1Q07157 1748 aa18.4■□□□□ 0.54
GTF3C6-201ENST00000329970 KIF13BQ9NQT8 1826 aa18.4■□□□□ 0.54
GTF3C6-201ENST00000329970 CABP4P57796 275 aa18.4■□□□□ 0.54
GTF3C6-201ENST00000329970 AKAP4Q5JQC9 854 aa18.4■□□□□ 0.54
GTF3C6-201ENST00000329970 CC2D1BQ5T0F9 858 aaKnown RBP18.4■□□□□ 0.54
GTF3C6-201ENST00000329970 RC3H1Q5TC82 1133 aaKnown RBP18.4■□□□□ 0.54
GTF3C6-201ENST00000329970 CD2APQ9Y5K6 639 aa18.4■□□□□ 0.54
GTF3C6-201ENST00000329970 C4AP0C0L4 1744 aa18.4■□□□□ 0.54
GTF3C6-201ENST00000329970 DIAPH1O60610 1272 aaKnown RBP18.39■□□□□ 0.53
GTF3C6-201ENST00000329970 MSL1Q68DK7 614 aa18.39■□□□□ 0.53
GTF3C6-201ENST00000329970 SLC4A9Q96Q91 983 aa18.39■□□□□ 0.53
GTF3C6-201ENST00000329970 CNTNAP4Q9C0A0 1308 aa18.39■□□□□ 0.53
GTF3C6-201ENST00000329970 KLHL34Q8N239 644 aa18.38■□□□□ 0.53
GTF3C6-201ENST00000329970 NLGN2Q8NFZ4 835 aa18.38■□□□□ 0.53
GTF3C6-201ENST00000329970 GNPATO15228 680 aa18.37■□□□□ 0.53
GTF3C6-201ENST00000329970 PHF14O94880 888 aa18.37■□□□□ 0.53
GTF3C6-201ENST00000329970 ADRA2BP18089 450 aa18.37■□□□□ 0.53
GTF3C6-201ENST00000329970 GPR162Q16538 588 aa18.37■□□□□ 0.53
GTF3C6-201ENST00000329970 UBR2Q8IWV8 1755 aa18.36■□□□□ 0.53
GTF3C6-201ENST00000329970 NFATC2IPQ8NCF5 419 aa18.35■□□□□ 0.53
GTF3C6-201ENST00000329970 RBM42Q9BTD8 480 aaKnown RBP18.35■□□□□ 0.53
GTF3C6-201ENST00000329970 RTCBQ9Y3I0 505 aaKnown RBP18.35■□□□□ 0.53
GTF3C6-201ENST00000329970 SLC52A2Q9HAB3 445 aa18.34■□□□□ 0.53
GTF3C6-201ENST00000329970 SIPA1L3O60292 1781 aaPredicted RBP18.34■□□□□ 0.53
GTF3C6-201ENST00000329970 GRIN3BO60391 1043 aa18.33■□□□□ 0.52
GTF3C6-201ENST00000329970 RPS6KA4O75676 772 aa18.33■□□□□ 0.52
GTF3C6-201ENST00000329970 HMOX1P09601 288 aa18.33■□□□□ 0.52
GTF3C6-201ENST00000329970 TRAPPC3LQ5T215 181 aa18.33■□□□□ 0.52
GTF3C6-201ENST00000329970 KIAA1551Q9HCM1 1747 aa18.32■□□□□ 0.52
GTF3C6-201ENST00000329970 RNMTO43148 476 aaKnown RBP18.32■□□□□ 0.52
GTF3C6-201ENST00000329970 SMIM5Q71RC9 77 aa18.32■□□□□ 0.52
GTF3C6-201ENST00000329970 MTHFSDQ2M296 383 aaKnown RBP18.31■□□□□ 0.52
GTF3C6-201ENST00000329970 ZNF784Q8NCA9 323 aaPredicted RBP18.31■□□□□ 0.52
GTF3C6-201ENST00000329970 KCPQ6ZWJ8 1503 aa18.31■□□□□ 0.52
GTF3C6-201ENST00000329970 YBX3P16989 372 aaKnown RBP eCLIP18.3■□□□□ 0.52
GTF3C6-201ENST00000329970 NLGN1Q8N2Q7 840 aa18.3■□□□□ 0.52
GTF3C6-201ENST00000329970 LGR6Q9HBX8 967 aa18.3■□□□□ 0.52
GTF3C6-201ENST00000329970 BRCA1P38398 1863 aaKnown RBP18.29■□□□□ 0.52
GTF3C6-201ENST00000329970 PTCD1O75127 700 aaKnown RBP18.29■□□□□ 0.52
GTF3C6-201ENST00000329970 ARHGEF1Q92888 912 aaKnown RBP18.29■□□□□ 0.52
GTF3C6-201ENST00000329970 CRKLP46109 303 aaKnown RBP18.28■□□□□ 0.52
GTF3C6-201ENST00000329970 GYS1P13807 737 aa18.27■□□□□ 0.52
GTF3C6-201ENST00000329970 PELP1Q8IZL8 1130 aaKnown RBP18.27■□□□□ 0.52
GTF3C6-201ENST00000329970 GAS2L2Q8NHY3 880 aa18.27■□□□□ 0.52
GTF3C6-201ENST00000329970 C10orf71Q711Q0 1435 aa18.26■□□□□ 0.51
GTF3C6-201ENST00000329970 MMP10P09238 476 aa18.26■□□□□ 0.51
GTF3C6-201ENST00000329970 RFC4P35249 363 aa18.26■□□□□ 0.51
GTF3C6-201ENST00000329970 VSIG10Q8N0Z9 540 aa18.26■□□□□ 0.51
GTF3C6-201ENST00000329970 CFAP53Q96M91 514 aa18.26■□□□□ 0.51
GTF3C6-201ENST00000329970 N4BP2Q86UW6 1770 aaPredicted RBP18.26■□□□□ 0.51
GTF3C6-201ENST00000329970 U2SURPO15042 1029 aaKnown RBP18.25■□□□□ 0.51
GTF3C6-201ENST00000329970 INTS5Q6P9B9 1019 aaKnown RBP18.24■□□□□ 0.51
GTF3C6-201ENST00000329970 PXDNLA1KZ92 1463 aa18.24■□□□□ 0.51
GTF3C6-201ENST00000329970 USP42Q9H9J4 1324 aaKnown RBP18.23■□□□□ 0.51
GTF3C6-201ENST00000329970 CEMIPQ8WUJ3 1361 aa18.23■□□□□ 0.51
GTF3C6-201ENST00000329970 GNAT3A8MTJ3 354 aa18.23■□□□□ 0.51
GTF3C6-201ENST00000329970 TGFB2P61812 414 aa18.23■□□□□ 0.51
GTF3C6-201ENST00000329970 ARFGEF1Q9Y6D6 1849 aa18.23■□□□□ 0.51
GTF3C6-201ENST00000329970 CYP19A1P11511 503 aaPredicted RBP18.22■□□□□ 0.51
GTF3C6-201ENST00000329970 PPP2R1AP30153 589 aa18.22■□□□□ 0.51
GTF3C6-201ENST00000329970 SLC39A6Q13433 755 aa18.22■□□□□ 0.51
GTF3C6-201ENST00000329970 DNAJC10Q8IXB1 793 aa18.22■□□□□ 0.51
GTF3C6-201ENST00000329970 RSPH6AQ9H0K4 717 aa18.22■□□□□ 0.51
GTF3C6-201ENST00000329970 CCDC87Q9NVE4 849 aa18.22■□□□□ 0.51
GTF3C6-201ENST00000329970 NUDCQ9Y266 331 aa18.22■□□□□ 0.51
GTF3C6-201ENST00000329970 SOS1Q07889 1333 aaPredicted RBP18.22■□□□□ 0.51
GTF3C6-201ENST00000329970 NRXN2Q9P2S2 1712 aa18.21■□□□□ 0.51
GTF3C6-201ENST00000329970 CNGB1Q14028 1251 aaPredicted RBP18.2■□□□□ 0.5
GTF3C6-201ENST00000329970 IL17REQ8NFR9 667 aa18.2■□□□□ 0.5
GTF3C6-201ENST00000329970 PARP3Q9Y6F1 533 aa18.2■□□□□ 0.5
GTF3C6-201ENST00000329970 AFDNP55196 1824 aaKnown RBP18.2■□□□□ 0.5
GTF3C6-201ENST00000329970 ADCY9O60503 1353 aa18.19■□□□□ 0.5
GTF3C6-201ENST00000329970 PRKAR2BP31323 418 aa18.19■□□□□ 0.5
GTF3C6-201ENST00000329970 TEFQ10587 303 aa18.19■□□□□ 0.5
GTF3C6-201ENST00000329970 COL15A1P39059 1388 aa18.18■□□□□ 0.5
GTF3C6-201ENST00000329970 FCHSD2O94868 740 aa18.18■□□□□ 0.5
GTF3C6-201ENST00000329970 TTC5Q8N0Z6 440 aa18.18■□□□□ 0.5
GTF3C6-201ENST00000329970 DLG5Q8TDM6 1919 aa18.17■□□□□ 0.5
GTF3C6-201ENST00000329970 FKBP8Q14318 412 aa18.17■□□□□ 0.5
GTF3C6-201ENST00000329970 ZNF790Q6PG37 636 aa18.17■□□□□ 0.5
GTF3C6-201ENST00000329970 PHACTR3Q96KR7 559 aa18.17■□□□□ 0.5
GTF3C6-201ENST00000329970 HEG1Q9ULI3 1381 aa18.17■□□□□ 0.5
GTF3C6-201ENST00000329970 SCN7AQ01118 1682 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms