RNA–Protein interactions for RNA: ENST00000327857.6

DEFA3-201, Transcript of defensin alpha 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEFA3, Length 498 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA3-201ENST00000327857 TIMELESSQ9UNS1 1208 aa13.15□□□□□ -0.3
DEFA3-201ENST00000327857 RTCBQ9Y3I0 505 aaKnown RBP13.15□□□□□ -0.3
DEFA3-201ENST00000327857 PKD1L3Q7Z443 1732 aa13.15□□□□□ -0.3
DEFA3-201ENST00000327857 CICQ96RK0 1608 aaPredicted RBP13.14□□□□□ -0.31
DEFA3-201ENST00000327857 A0A0G2JLW4 131 aa13.14□□□□□ -0.31
DEFA3-201ENST00000327857 FCHSD2O94868 740 aa13.14□□□□□ -0.31
DEFA3-201ENST00000327857 NKX1-1Q15270 411 aaPredicted RBP13.14□□□□□ -0.31
DEFA3-201ENST00000327857 WDR90Q96KV7 1748 aa13.13□□□□□ -0.31
DEFA3-201ENST00000327857 MAP2P11137 1827 aaKnown RBP13.13□□□□□ -0.31
DEFA3-201ENST00000327857 KIF13BQ9NQT8 1826 aa13.13□□□□□ -0.31
DEFA3-201ENST00000327857 ZNF316A6NFI3 1004 aaPredicted RBP13.13□□□□□ -0.31
DEFA3-201ENST00000327857 CDCA8Q53HL2 280 aa13.13□□□□□ -0.31
DEFA3-201ENST00000327857 IFNL2Q8IZJ0 200 aa13.13□□□□□ -0.31
DEFA3-201ENST00000327857 DNAJC5GQ8N7S2 189 aa13.13□□□□□ -0.31
DEFA3-201ENST00000327857 NMRK2Q9NPI5 230 aa13.13□□□□□ -0.31
DEFA3-201ENST00000327857 ASAP1Q9ULH1 1129 aa13.13□□□□□ -0.31
DEFA3-201ENST00000327857 PARP3Q9Y6F1 533 aa13.13□□□□□ -0.31
DEFA3-201ENST00000327857 PXDNLA1KZ92 1463 aa13.12□□□□□ -0.31
DEFA3-201ENST00000327857 RFC4P35249 363 aa13.12□□□□□ -0.31
DEFA3-201ENST00000327857 ITPK1Q13572 414 aa13.12□□□□□ -0.31
DEFA3-201ENST00000327857 RBM46Q8TBY0 533 aaKnown RBP13.12□□□□□ -0.31
DEFA3-201ENST00000327857 RBM42Q9BTD8 480 aaKnown RBP13.12□□□□□ -0.31
DEFA3-201ENST00000327857 EMILIN1Q9Y6C2 1016 aa13.12□□□□□ -0.31
DEFA3-201ENST00000327857 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.11□□□□□ -0.31
DEFA3-201ENST00000327857 KDM2BQ8NHM5 1336 aa13.11□□□□□ -0.31
DEFA3-201ENST00000327857 PLEKHG2Q9H7P9 1386 aa13.1□□□□□ -0.31
DEFA3-201ENST00000327857 CAPN15O75808 1086 aa13.1□□□□□ -0.31
DEFA3-201ENST00000327857 DPEP1P16444 411 aa13.1□□□□□ -0.31
DEFA3-201ENST00000327857 ADRA2BP18089 450 aa13.1□□□□□ -0.31
DEFA3-201ENST00000327857 C9orf131Q5VYM1 1079 aa13.1□□□□□ -0.31
DEFA3-201ENST00000327857 PHKG2P15735 406 aa13.09□□□□□ -0.31
DEFA3-201ENST00000327857 FSTL1Q12841 308 aa13.09□□□□□ -0.31
DEFA3-201ENST00000327857 KLRG1Q96E93 195 aa13.09□□□□□ -0.31
DEFA3-201ENST00000327857 ATG3Q9NT62 314 aa13.09□□□□□ -0.31
DEFA3-201ENST00000327857 PIM2Q9P1W9 311 aa13.09□□□□□ -0.31
DEFA3-201ENST00000327857 C4AP0C0L4 1744 aa13.08□□□□□ -0.32
DEFA3-201ENST00000327857 KIAA1551Q9HCM1 1747 aa13.08□□□□□ -0.32
DEFA3-201ENST00000327857 C10orf71Q711Q0 1435 aa13.08□□□□□ -0.32
DEFA3-201ENST00000327857 ARHGEF1Q92888 912 aaKnown RBP13.08□□□□□ -0.32
DEFA3-201ENST00000327857 EYA1Q99502 592 aa13.08□□□□□ -0.32
DEFA3-201ENST00000327857 ARFGEF1Q9Y6D6 1849 aa13.08□□□□□ -0.32
DEFA3-201ENST00000327857 HSP90AB1P08238 724 aaKnown RBP13.07□□□□□ -0.32
DEFA3-201ENST00000327857 DALRD3Q5D0E6 543 aaKnown RBP13.07□□□□□ -0.32
DEFA3-201ENST00000327857 RC3H1Q5TC82 1133 aaKnown RBP13.07□□□□□ -0.32
DEFA3-201ENST00000327857 RNF181Q9P0P0 153 aa13.07□□□□□ -0.32
DEFA3-201ENST00000327857 WASHC2AQ641Q2 1341 aa13.07□□□□□ -0.32
DEFA3-201ENST00000327857 BRCA1P38398 1863 aaKnown RBP13.06□□□□□ -0.32
DEFA3-201ENST00000327857 RPS6KA4O75676 772 aa13.06□□□□□ -0.32
DEFA3-201ENST00000327857 GYS1P13807 737 aa13.06□□□□□ -0.32
DEFA3-201ENST00000327857 HTRA3P83110 453 aa13.06□□□□□ -0.32
DEFA3-201ENST00000327857 COL13A1Q5TAT6 717 aaPredicted RBP13.06□□□□□ -0.32
DEFA3-201ENST00000327857 TNS4Q8IZW8 715 aa13.06□□□□□ -0.32
DEFA3-201ENST00000327857 NCAPD2Q15021 1401 aa13.05□□□□□ -0.32
DEFA3-201ENST00000327857 KCPQ6ZWJ8 1503 aa13.05□□□□□ -0.32
DEFA3-201ENST00000327857 ERVV-2B6SEH9 535 aa13.05□□□□□ -0.32
DEFA3-201ENST00000327857 CABP4P57796 275 aa13.05□□□□□ -0.32
DEFA3-201ENST00000327857 JMYQ8N9B5 988 aa13.05□□□□□ -0.32
DEFA3-201ENST00000327857 RRAGCQ9HB90 399 aa13.05□□□□□ -0.32
DEFA3-201ENST00000327857 ZNF831Q5JPB2 1677 aa13.05□□□□□ -0.32
DEFA3-201ENST00000327857 DIEXFQ68CQ4 756 aaKnown RBP13.04□□□□□ -0.32
DEFA3-201ENST00000327857 SMC1BQ8NDV3 1235 aa13.04□□□□□ -0.32
DEFA3-201ENST00000327857 DCAF5Q96JK2 942 aa13.04□□□□□ -0.32
DEFA3-201ENST00000327857 TNRC6CQ9HCJ0 1690 aaKnown RBP13.04□□□□□ -0.32
DEFA3-201ENST00000327857 CNTNAP4Q9C0A0 1308 aa13.04□□□□□ -0.32
DEFA3-201ENST00000327857 COL5A3P25940 1745 aaPredicted RBP13.03□□□□□ -0.32
DEFA3-201ENST00000327857 ANKRD26Q9UPS8 1709 aa13.03□□□□□ -0.32
DEFA3-201ENST00000327857 KDRP35968 1356 aa13.03□□□□□ -0.32
DEFA3-201ENST00000327857 PTCD1O75127 700 aaKnown RBP13.02□□□□□ -0.33
DEFA3-201ENST00000327857 KCNA3P22001 575 aa13.02□□□□□ -0.33
DEFA3-201ENST00000327857 PLEKHO1Q53GL0 409 aaPredicted RBP13.02□□□□□ -0.33
DEFA3-201ENST00000327857 CARD14Q9BXL6 1004 aa13.02□□□□□ -0.33
DEFA3-201ENST00000327857 TNNT2P45379 298 aaPredicted RBP13.01□□□□□ -0.33
DEFA3-201ENST00000327857 ZNF530Q6P9A1 599 aaPredicted RBP13.01□□□□□ -0.33
DEFA3-201ENST00000327857 SLC4A9Q96Q91 983 aa13.01□□□□□ -0.33
DEFA3-201ENST00000327857 POLKQ9UBT6 870 aa13.01□□□□□ -0.33
DEFA3-201ENST00000327857 SBF1O95248 1867 aa13.01□□□□□ -0.33
DEFA3-201ENST00000327857 ZPR1O75312 459 aa13□□□□□ -0.33
DEFA3-201ENST00000327857 CHRNA5P30532 468 aa13□□□□□ -0.33
DEFA3-201ENST00000327857 CRKLP46109 303 aaKnown RBP13□□□□□ -0.33
DEFA3-201ENST00000327857 MTHFSP49914 203 aa13□□□□□ -0.33
DEFA3-201ENST00000327857 PRELPP51888 382 aa13□□□□□ -0.33
DEFA3-201ENST00000327857 EIF4A2Q14240 407 aaKnown RBP13□□□□□ -0.33
DEFA3-201ENST00000327857 C1orf141Q5JVX7 400 aa13□□□□□ -0.33
DEFA3-201ENST00000327857 POLR3GLQ9BT43 218 aa13□□□□□ -0.33
DEFA3-201ENST00000327857 SRP68Q9UHB9 627 aaKnown RBP13□□□□□ -0.33
DEFA3-201ENST00000327857 MYH14Q7Z406 1995 aaKnown RBP13□□□□□ -0.33
DEFA3-201ENST00000327857 FKBP8Q14318 412 aa12.99□□□□□ -0.33
DEFA3-201ENST00000327857 AMOTQ4VCS5 1084 aa12.99□□□□□ -0.33
DEFA3-201ENST00000327857 USP42Q9H9J4 1324 aaKnown RBP12.98□□□□□ -0.33
DEFA3-201ENST00000327857 ZC3H4Q9UPT8 1303 aaKnown RBP12.98□□□□□ -0.33
DEFA3-201ENST00000327857 VEGFAP15692 232 aaPredicted RBP12.98□□□□□ -0.33
DEFA3-201ENST00000327857 NFATC2IPQ8NCF5 419 aa12.97□□□□□ -0.33
DEFA3-201ENST00000327857 CCDC88AQ3V6T2 1871 aa12.96□□□□□ -0.33
DEFA3-201ENST00000327857 HSPA1AP0DMV8 641 aaKnown RBP12.96□□□□□ -0.33
DEFA3-201ENST00000327857 HSPA1BP0DMV9 641 aaKnown RBP12.96□□□□□ -0.33
DEFA3-201ENST00000327857 LMNB1P20700 586 aa12.96□□□□□ -0.33
DEFA3-201ENST00000327857 DDR1Q08345 913 aa12.96□□□□□ -0.33
DEFA3-201ENST00000327857 GLTPD2A6NH11 291 aa12.95□□□□□ -0.34
DEFA3-201ENST00000327857 POLRMTO00411 1230 aaKnown RBP12.95□□□□□ -0.34
DEFA3-201ENST00000327857 RASSF7Q02833 373 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms