RNA–Protein interactions for RNA: ENST00000327726.10

CFD-201, Transcript of complement factor D, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CFD, Length 1,201 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFD-201ENST00000327726 CABP4P57796 275 aa28.24■■■□□ 2.11
CFD-201ENST00000327726 GPR162Q16538 588 aa28.24■■■□□ 2.11
CFD-201ENST00000327726 LINC00116Q8NCU8 138 aa28.24■■■□□ 2.11
CFD-201ENST00000327726 PHF14O94880 888 aa28.23■■■□□ 2.11
CFD-201ENST00000327726 CC2D1BQ5T0F9 858 aaKnown RBP28.23■■■□□ 2.11
CFD-201ENST00000327726 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP28.22■■■□□ 2.11
CFD-201ENST00000327726 UBR3Q6ZT12 1888 aa28.21■■■□□ 2.11
CFD-201ENST00000327726 KDM6AO15550 1401 aaPredicted RBP28.21■■■□□ 2.11
CFD-201ENST00000327726 ITPK1Q13572 414 aa28.21■■■□□ 2.11
CFD-201ENST00000327726 RBM42Q9BTD8 480 aaKnown RBP28.2■■■□□ 2.1
CFD-201ENST00000327726 NPC1L1Q9UHC9 1359 aa28.2■■■□□ 2.1
CFD-201ENST00000327726 UTRNP46939 3433 aa28.2■■■□□ 2.1
CFD-201ENST00000327726 GNPATO15228 680 aa28.19■■■□□ 2.1
CFD-201ENST00000327726 AMIGO3Q86WK7 504 aa28.18■■■□□ 2.1
CFD-201ENST00000327726 NLGN2Q8NFZ4 835 aa28.18■■■□□ 2.1
CFD-201ENST00000327726 PELP1Q8IZL8 1130 aaKnown RBP28.17■■■□□ 2.1
CFD-201ENST00000327726 DIAPH1O60610 1272 aaKnown RBP28.16■■■□□ 2.1
CFD-201ENST00000327726 CD2APQ9Y5K6 639 aa28.16■■■□□ 2.1
CFD-201ENST00000327726 ZNF831Q5JPB2 1677 aa28.16■■■□□ 2.1
CFD-201ENST00000327726 AKAP4Q5JQC9 854 aa28.15■■■□□ 2.1
CFD-201ENST00000327726 CHD4Q14839 1912 aa28.15■■■□□ 2.1
CFD-201ENST00000327726 SMIM5Q71RC9 77 aa28.14■■■□□ 2.1
CFD-201ENST00000327726 NFATC2IPQ8NCF5 419 aa28.14■■■□□ 2.1
CFD-201ENST00000327726 RTCBQ9Y3I0 505 aaKnown RBP28.14■■■□□ 2.1
CFD-201ENST00000327726 HMOX1P09601 288 aa28.13■■■□□ 2.09
CFD-201ENST00000327726 ZEB1P37275 1124 aaPredicted RBP28.13■■■□□ 2.09
CFD-201ENST00000327726 RC3H1Q5TC82 1133 aaKnown RBP28.13■■■□□ 2.09
CFD-201ENST00000327726 SLC4A9Q96Q91 983 aa28.12■■■□□ 2.09
CFD-201ENST00000327726 TRAPPC3LQ5T215 181 aa28.11■■■□□ 2.09
CFD-201ENST00000327726 GRIN3BO60391 1043 aa28.1■■■□□ 2.09
CFD-201ENST00000327726 CNTNAP4Q9C0A0 1308 aa28.1■■■□□ 2.09
CFD-201ENST00000327726 PTCD1O75127 700 aaKnown RBP28.09■■■□□ 2.09
CFD-201ENST00000327726 ADRA2BP18089 450 aa28.09■■■□□ 2.09
CFD-201ENST00000327726 CNGB1Q14028 1251 aaPredicted RBP28.09■■■□□ 2.09
CFD-201ENST00000327726 ZNF784Q8NCA9 323 aaPredicted RBP28.08■■■□□ 2.09
CFD-201ENST00000327726 SCN11AQ9UI33 1791 aa28.08■■■□□ 2.09
CFD-201ENST00000327726 RPS6KA4O75676 772 aa28.06■■■□□ 2.08
CFD-201ENST00000327726 SLC52A2Q9HAB3 445 aa28.06■■■□□ 2.08
CFD-201ENST00000327726 COL5A3P25940 1745 aaPredicted RBP28.06■■■□□ 2.08
CFD-201ENST00000327726 GOLGB1Q14789 3259 aaKnown RBP28.04■■■□□ 2.08
CFD-201ENST00000327726 RNMTO43148 476 aaKnown RBP28.04■■■□□ 2.08
CFD-201ENST00000327726 NLGN1Q8N2Q7 840 aa28.04■■■□□ 2.08
CFD-201ENST00000327726 U2SURPO15042 1029 aaKnown RBP28.03■■■□□ 2.08
CFD-201ENST00000327726 YBX3P16989 372 aaKnown RBP eCLIP28.03■■■□□ 2.083e-9■■■□□ 16.1
CFD-201ENST00000327726 RFC4P35249 363 aa28.03■■■□□ 2.08
CFD-201ENST00000327726 MTHFSDQ2M296 383 aaKnown RBP28.03■■■□□ 2.08
CFD-201ENST00000327726 ARHGEF1Q92888 912 aaKnown RBP28.03■■■□□ 2.08
CFD-201ENST00000327726 LGR6Q9HBX8 967 aa28.03■■■□□ 2.08
CFD-201ENST00000327726 COL3A1P02461 1466 aaPredicted RBP28.02■■■□□ 2.08
CFD-201ENST00000327726 MMP10P09238 476 aa28.01■■■□□ 2.07
CFD-201ENST00000327726 CRKLP46109 303 aaKnown RBP28.01■■■□□ 2.07
CFD-201ENST00000327726 CFAP53Q96M91 514 aa28.01■■■□□ 2.07
CFD-201ENST00000327726 MRC1P22897 1456 aa28.01■■■□□ 2.07
CFD-201ENST00000327726 CICQ96RK0 1608 aaPredicted RBP27.99■■■□□ 2.07
CFD-201ENST00000327726 MYH14Q7Z406 1995 aaKnown RBP27.97■■■□□ 2.07
CFD-201ENST00000327726 GYS1P13807 737 aa27.96■■■□□ 2.07
CFD-201ENST00000327726 GAS2L2Q8NHY3 880 aa27.96■■■□□ 2.07
CFD-201ENST00000327726 TJP1Q07157 1748 aa27.95■■■□□ 2.06
CFD-201ENST00000327726 ADAMTS7Q9UKP4 1686 aa27.94■■■□□ 2.06
CFD-201ENST00000327726 NUDCQ9Y266 331 aa27.94■■■□□ 2.06
CFD-201ENST00000327726 VIRMAQ69YN4 1812 aaKnown RBP27.93■■■□□ 2.06
CFD-201ENST00000327726 SLC39A6Q13433 755 aa27.93■■■□□ 2.06
CFD-201ENST00000327726 PARP3Q9Y6F1 533 aa27.93■■■□□ 2.06
CFD-201ENST00000327726 GNAT3A8MTJ3 354 aa27.92■■■□□ 2.06
CFD-201ENST00000327726 DNAJC10Q8IXB1 793 aa27.92■■■□□ 2.06
CFD-201ENST00000327726 CCDC87Q9NVE4 849 aa27.92■■■□□ 2.06
CFD-201ENST00000327726 DDX10Q13206 875 aaKnown RBP27.91■■■□□ 2.06
CFD-201ENST00000327726 INTS5Q6P9B9 1019 aaKnown RBP27.91■■■□□ 2.06
CFD-201ENST00000327726 C4AP0C0L4 1744 aa27.91■■■□□ 2.06
CFD-201ENST00000327726 TGFB2P61812 414 aa27.9■■■□□ 2.06
CFD-201ENST00000327726 TEFQ10587 303 aa27.9■■■□□ 2.06
CFD-201ENST00000327726 TTC5Q8N0Z6 440 aa27.9■■■□□ 2.06
CFD-201ENST00000327726 VSIG10Q8N0Z9 540 aa27.9■■■□□ 2.06
CFD-201ENST00000327726 USP42Q9H9J4 1324 aaKnown RBP27.9■■■□□ 2.06
CFD-201ENST00000327726 PPP2R1AP30153 589 aa27.89■■■□□ 2.06
CFD-201ENST00000327726 KCPQ6ZWJ8 1503 aa27.88■■■□□ 2.05
CFD-201ENST00000327726 CYP19A1P11511 503 aaPredicted RBP27.88■■■□□ 2.05
CFD-201ENST00000327726 C10orf71Q711Q0 1435 aa27.87■■■□□ 2.05
CFD-201ENST00000327726 SRP68Q9UHB9 627 aaKnown RBP27.87■■■□□ 2.05
CFD-201ENST00000327726 KIF13BQ9NQT8 1826 aa27.87■■■□□ 2.05
CFD-201ENST00000327726 ZPR1O75312 459 aa27.86■■■□□ 2.05
CFD-201ENST00000327726 PRKAR2BP31323 418 aa27.86■■■□□ 2.05
CFD-201ENST00000327726 WWC3Q9ULE0 1092 aa27.86■■■□□ 2.05
CFD-201ENST00000327726 PXDNLA1KZ92 1463 aa27.85■■■□□ 2.05
CFD-201ENST00000327726 IL17REQ8NFR9 667 aa27.85■■■□□ 2.05
CFD-201ENST00000327726 RSPH6AQ9H0K4 717 aa27.85■■■□□ 2.05
CFD-201ENST00000327726 SOS1Q07889 1333 aaPredicted RBP27.85■■■□□ 2.05
CFD-201ENST00000327726 U2AF1L5P0DN76 240 aaPredicted RBP27.83■■■□□ 2.05
CFD-201ENST00000327726 U2AF1Q01081 240 aaKnown RBP eCLIP27.83■■■□□ 2.05
CFD-201ENST00000327726 FKBP8Q14318 412 aa27.83■■■□□ 2.05
CFD-201ENST00000327726 UBR2Q8IWV8 1755 aa27.82■■■□□ 2.04
CFD-201ENST00000327726 STARD3NLO95772 234 aa27.82■■■□□ 2.04
CFD-201ENST00000327726 PHACTR3Q96KR7 559 aa27.82■■■□□ 2.04
CFD-201ENST00000327726 A0A0G2JLW4 131 aa27.81■■■□□ 2.04
CFD-201ENST00000327726 FCHSD2O94868 740 aa27.81■■■□□ 2.04
CFD-201ENST00000327726 ZNF790Q6PG37 636 aa27.81■■■□□ 2.04
CFD-201ENST00000327726 TEX13AQ9BXU3 409 aaPredicted RBP27.81■■■□□ 2.04
CFD-201ENST00000327726 GIGYF1O75420 1035 aaPredicted RBP27.8■■■□□ 2.04
CFD-201ENST00000327726 USPL1Q5W0Q7 1092 aa27.8■■■□□ 2.04
CFD-201ENST00000327726 ZBTB1Q9Y2K1 713 aa27.8■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms