RNA–Protein interactions for RNA: ENST00000326656.12

PTPMT1-201, Transcript of protein tyrosine phosphatase, mitochondrial 1, humanhuman

TSL 1 (best) BASIC

Gene PTPMT1, Length 928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPMT1-201ENST00000326656 ZNF530Q6P9A1 599 aaPredicted RBP24.1■■□□□ 1.45
PTPMT1-201ENST00000326656 LINC00116Q8NCU8 138 aa24.1■■□□□ 1.45
PTPMT1-201ENST00000326656 NLGN2Q8NFZ4 835 aa24.1■■□□□ 1.45
PTPMT1-201ENST00000326656 ZNF831Q5JPB2 1677 aa24.1■■□□□ 1.45
PTPMT1-201ENST00000326656 GRIN3BO60391 1043 aa24.09■■□□□ 1.45
PTPMT1-201ENST00000326656 IL13P35225 146 aa24.09■■□□□ 1.45
PTPMT1-201ENST00000326656 ITPK1Q13572 414 aa24.09■■□□□ 1.45
PTPMT1-201ENST00000326656 PER1O15534 1290 aaPredicted RBP24.08■■□□□ 1.45
PTPMT1-201ENST00000326656 MTHFSP49914 203 aa24.08■■□□□ 1.45
PTPMT1-201ENST00000326656 C1orf141Q5JVX7 400 aa24.08■■□□□ 1.45
PTPMT1-201ENST00000326656 SULT6B1Q6IMI4 303 aa24.08■■□□□ 1.45
PTPMT1-201ENST00000326656 AEBP1Q8IUX7 1158 aa24.07■■□□□ 1.44
PTPMT1-201ENST00000326656 GNPATO15228 680 aa24.06■■□□□ 1.44
PTPMT1-201ENST00000326656 CABP4P57796 275 aa24.06■■□□□ 1.44
PTPMT1-201ENST00000326656 RC3H1Q5TC82 1133 aaKnown RBP24.06■■□□□ 1.44
PTPMT1-201ENST00000326656 AMIGO3Q86WK7 504 aa24.06■■□□□ 1.44
PTPMT1-201ENST00000326656 PHF14O94880 888 aa24.05■■□□□ 1.44
PTPMT1-201ENST00000326656 PELP1Q8IZL8 1130 aaKnown RBP24.05■■□□□ 1.44
PTPMT1-201ENST00000326656 KDM6AO15550 1401 aaPredicted RBP24.04■■□□□ 1.44
PTPMT1-201ENST00000326656 SENP3-EIF4A1A0A087X0R7 540 aa24.04■■□□□ 1.44
PTPMT1-201ENST00000326656 RTCBQ9Y3I0 505 aaKnown RBP24.03■■□□□ 1.44
PTPMT1-201ENST00000326656 ADRA2BP18089 450 aa24.02■■□□□ 1.44
PTPMT1-201ENST00000326656 TRAPPC3LQ5T215 181 aa24.02■■□□□ 1.44
PTPMT1-201ENST00000326656 RBM42Q9BTD8 480 aaKnown RBP24.02■■□□□ 1.44
PTPMT1-201ENST00000326656 SLC4A9Q96Q91 983 aa24.01■■□□□ 1.43
PTPMT1-201ENST00000326656 CNTNAP4Q9C0A0 1308 aa24.01■■□□□ 1.43
PTPMT1-201ENST00000326656 NPC1L1Q9UHC9 1359 aa24.01■■□□□ 1.43
PTPMT1-201ENST00000326656 YBX3P16989 372 aaKnown RBP eCLIP24■■□□□ 1.433e-6■■□□□ 12.9
PTPMT1-201ENST00000326656 AKAP4Q5JQC9 854 aa24■■□□□ 1.43
PTPMT1-201ENST00000326656 NLGN1Q8N2Q7 840 aa24■■□□□ 1.43
PTPMT1-201ENST00000326656 NFATC2IPQ8NCF5 419 aa24■■□□□ 1.43
PTPMT1-201ENST00000326656 GOLGB1Q14789 3259 aaKnown RBP23.99■■□□□ 1.43
PTPMT1-201ENST00000326656 C1QTNF8P60827 252 aa23.99■■□□□ 1.43
PTPMT1-201ENST00000326656 SMIM5Q71RC9 77 aa23.99■■□□□ 1.43
PTPMT1-201ENST00000326656 RPS6KA4O75676 772 aa23.98■■□□□ 1.43
PTPMT1-201ENST00000326656 COL5A3P25940 1745 aaPredicted RBP23.97■■□□□ 1.43
PTPMT1-201ENST00000326656 SCN11AQ9UI33 1791 aa23.97■■□□□ 1.43
PTPMT1-201ENST00000326656 DIAPH1O60610 1272 aaKnown RBP23.96■■□□□ 1.43
PTPMT1-201ENST00000326656 CC2D1BQ5T0F9 858 aaKnown RBP23.95■■□□□ 1.42
PTPMT1-201ENST00000326656 ARHGEF1Q92888 912 aaKnown RBP23.94■■□□□ 1.42
PTPMT1-201ENST00000326656 PTCD1O75127 700 aaKnown RBP23.93■■□□□ 1.42
PTPMT1-201ENST00000326656 MMP10P09238 476 aa23.93■■□□□ 1.42
PTPMT1-201ENST00000326656 RFC4P35249 363 aa23.93■■□□□ 1.42
PTPMT1-201ENST00000326656 SLC52A2Q9HAB3 445 aa23.92■■□□□ 1.42
PTPMT1-201ENST00000326656 CICQ96RK0 1608 aaPredicted RBP23.92■■□□□ 1.42
PTPMT1-201ENST00000326656 MYH14Q7Z406 1995 aaKnown RBP23.91■■□□□ 1.42
PTPMT1-201ENST00000326656 HMOX1P09601 288 aa23.91■■□□□ 1.42
PTPMT1-201ENST00000326656 GYS1P13807 737 aa23.89■■□□□ 1.41
PTPMT1-201ENST00000326656 CRKLP46109 303 aaKnown RBP23.89■■□□□ 1.41
PTPMT1-201ENST00000326656 TGFB2P61812 414 aa23.89■■□□□ 1.41
PTPMT1-201ENST00000326656 LGR6Q9HBX8 967 aa23.89■■□□□ 1.41
PTPMT1-201ENST00000326656 RNMTO43148 476 aaKnown RBP23.88■■□□□ 1.41
PTPMT1-201ENST00000326656 MTHFSDQ2M296 383 aaKnown RBP23.88■■□□□ 1.41
PTPMT1-201ENST00000326656 KIF13BQ9NQT8 1826 aa23.88■■□□□ 1.41
PTPMT1-201ENST00000326656 MRC1P22897 1456 aa23.87■■□□□ 1.41
PTPMT1-201ENST00000326656 ADAMTS7Q9UKP4 1686 aa23.86■■□□□ 1.41
PTPMT1-201ENST00000326656 CCDC87Q9NVE4 849 aa23.85■■□□□ 1.41
PTPMT1-201ENST00000326656 PARP3Q9Y6F1 533 aa23.85■■□□□ 1.41
PTPMT1-201ENST00000326656 TJP1Q07157 1748 aa23.84■■□□□ 1.41
PTPMT1-201ENST00000326656 GIGYF1O75420 1035 aaPredicted RBP23.84■■□□□ 1.41
PTPMT1-201ENST00000326656 INTS5Q6P9B9 1019 aaKnown RBP23.84■■□□□ 1.41
PTPMT1-201ENST00000326656 VSIG10Q8N0Z9 540 aa23.84■■□□□ 1.41
PTPMT1-201ENST00000326656 VIRMAQ69YN4 1812 aaKnown RBP23.84■■□□□ 1.41
PTPMT1-201ENST00000326656 COL3A1P02461 1466 aaPredicted RBP23.83■■□□□ 1.41
PTPMT1-201ENST00000326656 C4AP0C0L4 1744 aa23.83■■□□□ 1.41
PTPMT1-201ENST00000326656 USP42Q9H9J4 1324 aaKnown RBP23.83■■□□□ 1.4
PTPMT1-201ENST00000326656 C10orf71Q711Q0 1435 aa23.82■■□□□ 1.4
PTPMT1-201ENST00000326656 U2SURPO15042 1029 aaKnown RBP23.81■■□□□ 1.4
PTPMT1-201ENST00000326656 DNAJC10Q8IXB1 793 aa23.81■■□□□ 1.4
PTPMT1-201ENST00000326656 GAS2L2Q8NHY3 880 aa23.81■■□□□ 1.4
PTPMT1-201ENST00000326656 CFAP53Q96M91 514 aa23.81■■□□□ 1.4
PTPMT1-201ENST00000326656 CYP19A1P11511 503 aaPredicted RBP23.8■■□□□ 1.4
PTPMT1-201ENST00000326656 PXDNLA1KZ92 1463 aa23.8■■□□□ 1.4
PTPMT1-201ENST00000326656 SLC39A6Q13433 755 aa23.79■■□□□ 1.4
PTPMT1-201ENST00000326656 ADCY9O60503 1353 aa23.78■■□□□ 1.4
PTPMT1-201ENST00000326656 GNAT3A8MTJ3 354 aa23.78■■□□□ 1.4
PTPMT1-201ENST00000326656 ZPR1O75312 459 aa23.78■■□□□ 1.4
PTPMT1-201ENST00000326656 ATP10DQ9P241 1426 aa23.77■■□□□ 1.4
PTPMT1-201ENST00000326656 KIAA1551Q9HCM1 1747 aa23.77■■□□□ 1.4
PTPMT1-201ENST00000326656 A0A0G2JLW4 131 aa23.77■■□□□ 1.4
PTPMT1-201ENST00000326656 SRP68Q9UHB9 627 aaKnown RBP23.77■■□□□ 1.4
PTPMT1-201ENST00000326656 KCPQ6ZWJ8 1503 aa23.77■■□□□ 1.4
PTPMT1-201ENST00000326656 SOS1Q07889 1333 aaPredicted RBP23.77■■□□□ 1.4
PTPMT1-201ENST00000326656 TM4SF1P30408 202 aa23.76■■□□□ 1.39
PTPMT1-201ENST00000326656 FKBP8Q14318 412 aa23.76■■□□□ 1.39
PTPMT1-201ENST00000326656 NUDCQ9Y266 331 aa23.76■■□□□ 1.39
PTPMT1-201ENST00000326656 TEFQ10587 303 aa23.75■■□□□ 1.39
PTPMT1-201ENST00000326656 CNGB1Q14028 1251 aaPredicted RBP23.75■■□□□ 1.39
PTPMT1-201ENST00000326656 TTC5Q8N0Z6 440 aa23.75■■□□□ 1.39
PTPMT1-201ENST00000326656 IL17REQ8NFR9 667 aa23.75■■□□□ 1.39
PTPMT1-201ENST00000326656 TEX13AQ9BXU3 409 aaPredicted RBP23.75■■□□□ 1.39
PTPMT1-201ENST00000326656 N4BP2Q86UW6 1770 aaPredicted RBP23.75■■□□□ 1.39
PTPMT1-201ENST00000326656 UBR2Q8IWV8 1755 aa23.74■■□□□ 1.39
PTPMT1-201ENST00000326656 STARD3NLO95772 234 aa23.74■■□□□ 1.39
PTPMT1-201ENST00000326656 DPEP1P16444 411 aa23.74■■□□□ 1.39
PTPMT1-201ENST00000326656 GPBP1L1Q9HC44 474 aaPredicted RBP23.74■■□□□ 1.39
PTPMT1-201ENST00000326656 NARFQ9UHQ1 456 aa23.74■■□□□ 1.39
PTPMT1-201ENST00000326656 WWC3Q9ULE0 1092 aa23.74■■□□□ 1.39
PTPMT1-201ENST00000326656 BCS1LQ9Y276 419 aa23.73■■□□□ 1.39
PTPMT1-201ENST00000326656 DDR1Q08345 913 aa23.72■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms