RNA–Protein interactions for RNA: ENST00000325590.9

AMPH-201, Transcript of amphiphysin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene AMPH, Length 3,145 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMPH-201ENST00000325590 KIAA2012Q0VF49 1180 aa11.23□□□□□ -0.61
AMPH-201ENST00000325590 ANKLE2Q86XL3 938 aa11.23□□□□□ -0.61
AMPH-201ENST00000325590 PLEKHF1Q96S99 279 aa11.23□□□□□ -0.61
AMPH-201ENST00000325590 NSFL1CQ9UNZ2 370 aaKnown RBP11.23□□□□□ -0.61
AMPH-201ENST00000325590 DLG5Q8TDM6 1919 aa11.23□□□□□ -0.61
AMPH-201ENST00000325590 SSH2Q76I76 1423 aa11.23□□□□□ -0.61
AMPH-201ENST00000325590 LETM1O95202 739 aaPredicted RBP11.22□□□□□ -0.61
AMPH-201ENST00000325590 MAPK8IP2Q13387 824 aaPredicted RBP11.22□□□□□ -0.61
AMPH-201ENST00000325590 CLEC17AQ6ZS10 378 aa11.22□□□□□ -0.61
AMPH-201ENST00000325590 CGNQ9P2M7 1197 aaKnown RBP11.22□□□□□ -0.61
AMPH-201ENST00000325590 TTC21BQ7Z4L5 1316 aa11.22□□□□□ -0.61
AMPH-201ENST00000325590 DIAPH1O60610 1272 aaKnown RBP11.22□□□□□ -0.61
AMPH-201ENST00000325590 HDAC1Q13547 482 aaPredicted RBP11.22□□□□□ -0.61
AMPH-201ENST00000325590 TMEM63CQ9P1W3 806 aa11.22□□□□□ -0.61
AMPH-201ENST00000325590 AATKQ6ZMQ8 1374 aa11.21□□□□□ -0.61
AMPH-201ENST00000325590 RRS1Q15050 365 aaKnown RBP11.21□□□□□ -0.62
AMPH-201ENST00000325590 COG3Q96JB2 828 aa11.21□□□□□ -0.62
AMPH-201ENST00000325590 RNF216Q9NWF9 866 aaPredicted RBP11.21□□□□□ -0.62
AMPH-201ENST00000325590 KIF16BQ96L93 1317 aa11.2□□□□□ -0.62
AMPH-201ENST00000325590 CT47B1P0C2W7 299 aaPredicted RBP11.2□□□□□ -0.62
AMPH-201ENST00000325590 TRIM27P14373 513 aa11.2□□□□□ -0.62
AMPH-201ENST00000325590 TSR2Q969E8 191 aaKnown RBP11.2□□□□□ -0.62
AMPH-201ENST00000325590 SMC4Q9NTJ3 1288 aa11.2□□□□□ -0.62
AMPH-201ENST00000325590 NPHP4O75161 1426 aaPredicted RBP11.2□□□□□ -0.62
AMPH-201ENST00000325590 LRSAM1Q6UWE0 723 aa11.2□□□□□ -0.62
AMPH-201ENST00000325590 TBC1D9Q6ZT07 1266 aa11.2□□□□□ -0.62
AMPH-201ENST00000325590 RBM33Q96EV2 1170 aaKnown RBP11.2□□□□□ -0.62
AMPH-201ENST00000325590 U2AF2P26368 475 aaKnown RBP eCLIP11.2□□□□□ -0.62
AMPH-201ENST00000325590 ANKRD45Q5TZF3 282 aa11.2□□□□□ -0.62
AMPH-201ENST00000325590 KIF3AQ9Y496 699 aa11.2□□□□□ -0.62
AMPH-201ENST00000325590 NWD1Q149M9 1564 aa11.19□□□□□ -0.62
AMPH-201ENST00000325590 ANKARQ7Z5J8 1434 aa11.19□□□□□ -0.62
AMPH-201ENST00000325590 NUCB1Q02818 461 aa11.19□□□□□ -0.62
AMPH-201ENST00000325590 NOLC1Q14978 699 aaKnown RBP eCLIP11.19□□□□□ -0.62
AMPH-201ENST00000325590 CHD1LQ86WJ1 897 aa11.19□□□□□ -0.62
AMPH-201ENST00000325590 HSP90B1P14625 803 aaKnown RBP11.19□□□□□ -0.62
AMPH-201ENST00000325590 NUCB2P80303 420 aa11.19□□□□□ -0.62
AMPH-201ENST00000325590 TTC12Q9H892 705 aaPredicted RBP11.19□□□□□ -0.62
AMPH-201ENST00000325590 BCL2L12Q9HB09 334 aa11.19□□□□□ -0.62
AMPH-201ENST00000325590 USP54Q70EL1 1684 aa11.19□□□□□ -0.62
AMPH-201ENST00000325590 RGPD1P0DJD0 1748 aa11.19□□□□□ -0.62
AMPH-201ENST00000325590 ZNF771Q7L3S4 317 aaPredicted RBP11.18□□□□□ -0.62
AMPH-201ENST00000325590 PDCL2Q8N4E4 241 aa11.18□□□□□ -0.62
AMPH-201ENST00000325590 ZGPATQ8N5A5 531 aaKnown RBP11.18□□□□□ -0.62
AMPH-201ENST00000325590 TMEM57Q8N5G2 664 aa11.18□□□□□ -0.62
AMPH-201ENST00000325590 TMPOP42166 694 aaKnown RBP11.18□□□□□ -0.62
AMPH-201ENST00000325590 PRIMPOLQ96LW4 560 aa11.18□□□□□ -0.62
AMPH-201ENST00000325590 DDX19BQ9UMR2 479 aa11.18□□□□□ -0.62
AMPH-201ENST00000325590 IL13P35225 146 aa11.17□□□□□ -0.62
AMPH-201ENST00000325590 HMGN5P82970 282 aaKnown RBP11.17□□□□□ -0.62
AMPH-201ENST00000325590 TRIM35Q9UPQ4 493 aa11.17□□□□□ -0.62
AMPH-201ENST00000325590 BMP2KLQ5H9B9 411 aa11.17□□□□□ -0.62
AMPH-201ENST00000325590 SSH1Q8WYL5 1049 aa11.17□□□□□ -0.62
AMPH-201ENST00000325590 NOB1Q9ULX3 412 aaKnown RBP11.17□□□□□ -0.62
AMPH-201ENST00000325590 STRCP1A6NGW2 1772 aa11.17□□□□□ -0.62
AMPH-201ENST00000325590 ADGRL3Q9HAR2 1447 aa11.16□□□□□ -0.62
AMPH-201ENST00000325590 HMOX1P09601 288 aa11.16□□□□□ -0.62
AMPH-201ENST00000325590 EXOSC9Q06265 439 aaKnown RBP11.16□□□□□ -0.62
AMPH-201ENST00000325590 TPRNQ4KMQ1 711 aa11.16□□□□□ -0.62
AMPH-201ENST00000325590 USP31Q70CQ4 1352 aa11.16□□□□□ -0.62
AMPH-201ENST00000325590 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.16□□□□□ -0.62
AMPH-201ENST00000325590 AK9Q5TCS8 1911 aa11.16□□□□□ -0.62
AMPH-201ENST00000325590 PRKAR2BP31323 418 aa11.15□□□□□ -0.62
AMPH-201ENST00000325590 FOXD4L6Q3SYB3 417 aaPredicted RBP11.15□□□□□ -0.62
AMPH-201ENST00000325590 FOXD4L3Q6VB84 417 aaPredicted RBP11.15□□□□□ -0.62
AMPH-201ENST00000325590 NGDNQ8NEJ9 315 aaKnown RBP11.15□□□□□ -0.62
AMPH-201ENST00000325590 ZBTB40Q9NUA8 1239 aa11.15□□□□□ -0.62
AMPH-201ENST00000325590 ZDHHC9Q9Y397 364 aa11.15□□□□□ -0.62
AMPH-201ENST00000325590 CYP2E1P05181 493 aaPredicted RBP11.15□□□□□ -0.62
AMPH-201ENST00000325590 ATF7IPQ6VMQ6 1270 aa11.15□□□□□ -0.62
AMPH-201ENST00000325590 PIBF1Q8WXW3 757 aa11.15□□□□□ -0.63
AMPH-201ENST00000325590 IL16Q14005 1332 aa11.15□□□□□ -0.63
AMPH-201ENST00000325590 LTN1O94822 1766 aa11.15□□□□□ -0.63
AMPH-201ENST00000325590 SOX12O15370 315 aa11.14□□□□□ -0.63
AMPH-201ENST00000325590 FCHSD2O94868 740 aa11.14□□□□□ -0.63
AMPH-201ENST00000325590 GTF2F1P35269 517 aaKnown RBP eCLIP11.14□□□□□ -0.63
AMPH-201ENST00000325590 PHACTR3Q96KR7 559 aa11.14□□□□□ -0.63
AMPH-201ENST00000325590 TTC21AQ8NDW8 1320 aa11.14□□□□□ -0.63
AMPH-201ENST00000325590 C1orf115Q9H7X2 142 aa11.14□□□□□ -0.63
AMPH-201ENST00000325590 CDK11BP21127 795 aaKnown RBP11.13□□□□□ -0.63
AMPH-201ENST00000325590 TSPY26PQ9H489 355 aa11.13□□□□□ -0.63
AMPH-201ENST00000325590 USP25Q9UHP3 1055 aa11.13□□□□□ -0.63
AMPH-201ENST00000325590 PLCB2Q00722 1185 aa11.13□□□□□ -0.63
AMPH-201ENST00000325590 RGS22Q8NE09 1264 aa11.13□□□□□ -0.63
AMPH-201ENST00000325590 KCNJ4P48050 445 aa11.13□□□□□ -0.63
AMPH-201ENST00000325590 CNPY4Q8N129 248 aa11.13□□□□□ -0.63
AMPH-201ENST00000325590 RIOK3O14730 519 aaKnown RBP11.12□□□□□ -0.63
AMPH-201ENST00000325590 EIF4A2Q14240 407 aaKnown RBP11.12□□□□□ -0.63
AMPH-201ENST00000325590 RABEP1Q15276 862 aa11.12□□□□□ -0.63
AMPH-201ENST00000325590 MAP3K19Q56UN5 1328 aa11.11□□□□□ -0.63
AMPH-201ENST00000325590 HSP90AB2PQ58FF8 381 aa11.11□□□□□ -0.63
AMPH-201ENST00000325590 AEBP1Q8IUX7 1158 aa11.11□□□□□ -0.63
AMPH-201ENST00000325590 NUTM2GQ5VZR2 741 aa11.11□□□□□ -0.63
AMPH-201ENST00000325590 GDPD2Q9HCC8 539 aa11.11□□□□□ -0.63
AMPH-201ENST00000325590 ADCY5O95622 1261 aa11.1□□□□□ -0.63
AMPH-201ENST00000325590 TAF3Q5VWG9 929 aa11.1□□□□□ -0.63
AMPH-201ENST00000325590 CWC22Q9HCG8 908 aaKnown RBP11.1□□□□□ -0.63
AMPH-201ENST00000325590 KCNG1Q9UIX4 513 aa11.1□□□□□ -0.63
AMPH-201ENST00000325590 PHF8Q9UPP1 1060 aa11.1□□□□□ -0.63
AMPH-201ENST00000325590 TRPM3Q9HCF6 1732 aaPredicted RBP11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms