RNA–Protein interactions for RNA: ENST00000325243.6

CBX3P1-201, Transcript of chromobox 3 pseudogene 1, humanhuman

BASIC

Gene CBX3P1, Length 554 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P1-201ENST00000325243 BEND7Q8N7W2 519 aaPredicted RBP7.84□□□□□ -1.15
CBX3P1-201ENST00000325243 FHDC1Q9C0D6 1143 aaPredicted RBP7.84□□□□□ -1.15
CBX3P1-201ENST00000325243 OIP5O43482 229 aa7.83□□□□□ -1.16
CBX3P1-201ENST00000325243 STAU1O95793 577 aaKnown RBP7.83□□□□□ -1.16
CBX3P1-201ENST00000325243 UBAP2LQ14157 1087 aaKnown RBP7.83□□□□□ -1.16
CBX3P1-201ENST00000325243 XAGE2Q96GT9 111 aa7.83□□□□□ -1.16
CBX3P1-201ENST00000325243 ZSCAN10Q96SZ4 725 aaPredicted RBP7.83□□□□□ -1.16
CBX3P1-201ENST00000325243 LRRC4BQ9NT99 713 aa7.83□□□□□ -1.16
CBX3P1-201ENST00000325243 TBC1D2BQ9UPU7 963 aa7.83□□□□□ -1.16
CBX3P1-201ENST00000325243 A0A1B0GTH6 734 aa7.82□□□□□ -1.16
CBX3P1-201ENST00000325243 MYCP01106 439 aaPredicted RBP7.82□□□□□ -1.16
CBX3P1-201ENST00000325243 C4orf17Q53FE4 359 aa7.82□□□□□ -1.16
CBX3P1-201ENST00000325243 OXCT2Q9BYC2 517 aaPredicted RBP7.82□□□□□ -1.16
CBX3P1-201ENST00000325243 NSFL1CQ9UNZ2 370 aaKnown RBP7.82□□□□□ -1.16
CBX3P1-201ENST00000325243 APBB1O00213 710 aa7.81□□□□□ -1.16
CBX3P1-201ENST00000325243 SNRPNP63162 240 aaKnown RBP7.81□□□□□ -1.16
CBX3P1-201ENST00000325243 C1orf229Q6ZS94 237 aaPredicted RBP7.81□□□□□ -1.16
CBX3P1-201ENST00000325243 PODNQ7Z5L7 613 aa7.81□□□□□ -1.16
CBX3P1-201ENST00000325243 PHTF2Q8N3S3 785 aa7.81□□□□□ -1.16
CBX3P1-201ENST00000325243 CFHR5Q9BXR6 569 aa7.81□□□□□ -1.16
CBX3P1-201ENST00000325243 RUBCNLQ9H714 662 aa7.81□□□□□ -1.16
CBX3P1-201ENST00000325243 SHISA8B8ZZ34 492 aa7.8□□□□□ -1.16
CBX3P1-201ENST00000325243 MAP2K3P46734 347 aa7.8□□□□□ -1.16
CBX3P1-201ENST00000325243 IRF5Q13568 498 aa7.8□□□□□ -1.16
CBX3P1-201ENST00000325243 SPOCK3Q9BQ16 436 aa7.8□□□□□ -1.16
CBX3P1-201ENST00000325243 ETNK1Q9HBU6 452 aa7.8□□□□□ -1.16
CBX3P1-201ENST00000325243 MSTNO14793 375 aa7.79□□□□□ -1.16
CBX3P1-201ENST00000325243 MSX1P28360 303 aa7.79□□□□□ -1.16
CBX3P1-201ENST00000325243 GNASQ5JWF2 1037 aa7.79□□□□□ -1.16
CBX3P1-201ENST00000325243 TMEM214Q6NUQ4 689 aaKnown RBP7.79□□□□□ -1.16
CBX3P1-201ENST00000325243 KLRG1Q96E93 195 aa7.79□□□□□ -1.16
CBX3P1-201ENST00000325243 PROCP04070 461 aa7.78□□□□□ -1.16
CBX3P1-201ENST00000325243 DOLKQ9UPQ8 538 aa7.78□□□□□ -1.16
CBX3P1-201ENST00000325243 PHF24Q9UPV7 400 aa7.78□□□□□ -1.16
CBX3P1-201ENST00000325243 SLC24A1O60721 1099 aa7.77□□□□□ -1.17
CBX3P1-201ENST00000325243 ESCO1Q5FWF5 840 aa7.77□□□□□ -1.17
CBX3P1-201ENST00000325243 GALNT6Q8NCL4 622 aa7.77□□□□□ -1.17
CBX3P1-201ENST00000325243 C2CD2LO14523 706 aa7.76□□□□□ -1.17
CBX3P1-201ENST00000325243 EIF4G2P78344 907 aaKnown RBP eCLIP7.76□□□□□ -1.17
CBX3P1-201ENST00000325243 USP4Q13107 963 aa7.76□□□□□ -1.17
CBX3P1-201ENST00000325243 LBRQ14739 615 aaKnown RBP7.76□□□□□ -1.17
CBX3P1-201ENST00000325243 TLR1Q15399 786 aa7.76□□□□□ -1.17
CBX3P1-201ENST00000325243 PPARGC1BQ86YN6 1023 aaKnown RBP7.76□□□□□ -1.17
CBX3P1-201ENST00000325243 RHBDD1Q8TEB9 315 aa7.76□□□□□ -1.17
CBX3P1-201ENST00000325243 ABHD17AQ96GS6 310 aa7.76□□□□□ -1.17
CBX3P1-201ENST00000325243 NDFIP2Q9NV92 336 aa7.76□□□□□ -1.17
CBX3P1-201ENST00000325243 CHIC2Q9UKJ5 165 aa7.76□□□□□ -1.17
CBX3P1-201ENST00000325243 CSB-PGBD3P0DP91 1061 aa7.75□□□□□ -1.17
CBX3P1-201ENST00000325243 GTF2E1P29083 439 aaPredicted RBP7.75□□□□□ -1.17
CBX3P1-201ENST00000325243 SLFNL1Q499Z3 407 aa7.75□□□□□ -1.17
CBX3P1-201ENST00000325243 OXLD1Q5BKU9 147 aa7.75□□□□□ -1.17
CBX3P1-201ENST00000325243 RNF135Q8IUD6 432 aa7.75□□□□□ -1.17
CBX3P1-201ENST00000325243 PGBD3Q8N328 593 aa7.75□□□□□ -1.17
CBX3P1-201ENST00000325243 GDF2Q9UK05 429 aaPredicted RBP7.75□□□□□ -1.17
CBX3P1-201ENST00000325243 ATXN7L1Q9ULK2 861 aaPredicted RBP7.75□□□□□ -1.17
CBX3P1-201ENST00000325243 KRBA1A5PL33 1030 aa7.74□□□□□ -1.17
CBX3P1-201ENST00000325243 BNIP3LO60238 219 aa7.74□□□□□ -1.17
CBX3P1-201ENST00000325243 ADAM23O75077 832 aa7.74□□□□□ -1.17
CBX3P1-201ENST00000325243 HOXB4P17483 251 aaPredicted RBP7.74□□□□□ -1.17
CBX3P1-201ENST00000325243 SCNN1DP51172 638 aa7.74□□□□□ -1.17
CBX3P1-201ENST00000325243 CTBSQ01459 385 aa7.74□□□□□ -1.17
CBX3P1-201ENST00000325243 VAC14Q08AM6 782 aa7.74□□□□□ -1.17
CBX3P1-201ENST00000325243 EFHC2Q5JST6 749 aa7.74□□□□□ -1.17
CBX3P1-201ENST00000325243 EDARADDQ8WWZ3 215 aa7.74□□□□□ -1.17
CBX3P1-201ENST00000325243 CRISPLD1Q9H336 500 aa7.74□□□□□ -1.17
CBX3P1-201ENST00000325243 FGFR3P22607 806 aa7.73□□□□□ -1.17
CBX3P1-201ENST00000325243 COL8A1P27658 744 aa7.73□□□□□ -1.17
CBX3P1-201ENST00000325243 PLA2G4AP47712 749 aa7.73□□□□□ -1.17
CBX3P1-201ENST00000325243 GOLGA6L1Q8N7Z2 621 aa7.73□□□□□ -1.17
CBX3P1-201ENST00000325243 MKL2Q9ULH7 1088 aa7.73□□□□□ -1.17
CBX3P1-201ENST00000325243 BMP4P12644 408 aa7.72□□□□□ -1.17
CBX3P1-201ENST00000325243 ATP4AP20648 1035 aa7.72□□□□□ -1.17
CBX3P1-201ENST00000325243 SLCO4C1Q6ZQN7 724 aa7.72□□□□□ -1.17
CBX3P1-201ENST00000325243 RRAGCQ9HB90 399 aa7.72□□□□□ -1.17
CBX3P1-201ENST00000325243 DNAAF2Q9NVR5 837 aaKnown RBP7.72□□□□□ -1.17
CBX3P1-201ENST00000325243 GGA1Q9UJY5 639 aa7.72□□□□□ -1.17
CBX3P1-201ENST00000325243 INHAP05111 366 aa7.71□□□□□ -1.18
CBX3P1-201ENST00000325243 GDF10P55107 478 aa7.71□□□□□ -1.18
CBX3P1-201ENST00000325243 GDPD2Q9HCC8 539 aa7.71□□□□□ -1.18
CBX3P1-201ENST00000325243 HCN2Q9UL51 889 aa7.71□□□□□ -1.18
CBX3P1-201ENST00000325243 LINC00114Q6XXX2 140 aa7.7□□□□□ -1.18
CBX3P1-201ENST00000325243 TBC1D9Q6ZT07 1266 aa7.7□□□□□ -1.18
CBX3P1-201ENST00000325243 ZCCHC2Q9C0B9 1178 aaKnown RBP7.7□□□□□ -1.18
CBX3P1-201ENST00000325243 SUV39H2Q9H5I1 410 aa7.7□□□□□ -1.18
CBX3P1-201ENST00000325243 PRM3Q9NNZ6 103 aa7.7□□□□□ -1.18
CBX3P1-201ENST00000325243 ZNF295-AS1Q8N0V1 137 aa7.69□□□□□ -1.18
CBX3P1-201ENST00000325243 SIRT1Q96EB6 747 aa7.69□□□□□ -1.18
CBX3P1-201ENST00000325243 EPXP11678 715 aa7.68□□□□□ -1.18
CBX3P1-201ENST00000325243 AMPD1P23109 780 aa7.68□□□□□ -1.18
CBX3P1-201ENST00000325243 ABL2P42684 1182 aa7.68□□□□□ -1.18
CBX3P1-201ENST00000325243 PLPP7Q8NBV4 271 aa7.68□□□□□ -1.18
CBX3P1-201ENST00000325243 PCDHGC4Q9Y5F7 938 aa7.68□□□□□ -1.18
CBX3P1-201ENST00000325243 TMEM229AB2RXF0 380 aa7.67□□□□□ -1.18
CBX3P1-201ENST00000325243 SMTNP53814 917 aa7.67□□□□□ -1.18
CBX3P1-201ENST00000325243 GRIN2CQ14957 1233 aa7.67□□□□□ -1.18
CBX3P1-201ENST00000325243 FIGNL1Q6PIW4 674 aa7.67□□□□□ -1.18
CBX3P1-201ENST00000325243 C1orf216Q8TAB5 229 aa7.67□□□□□ -1.18
CBX3P1-201ENST00000325243 AIDAQ96BJ3 306 aa7.67□□□□□ -1.18
CBX3P1-201ENST00000325243 NIFKQ9BYG3 293 aaKnown RBP7.67□□□□□ -1.18
CBX3P1-201ENST00000325243 SERTAD1Q9UHV2 236 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms