RNA–Protein interactions for RNA: ENST00000325083.12

PCM1-201, Transcript of pericentriolar material 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCM1, Length 6,820 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-201ENST00000325083 HOOK3Q86VS8 718 aa16.44■□□□□ 0.22
PCM1-201ENST00000325083 CCDC83Q8IWF9 413 aa16.44■□□□□ 0.22
PCM1-201ENST00000325083 NUP88Q99567 741 aaPredicted RBP16.43■□□□□ 0.22
PCM1-201ENST00000325083 CA8P35219 290 aa16.43■□□□□ 0.22
PCM1-201ENST00000325083 SRCIN1Q9C0H9 1055 aa16.43■□□□□ 0.22
PCM1-201ENST00000325083 URI1O94763 535 aaPredicted RBP16.43■□□□□ 0.22
PCM1-201ENST00000325083 PROSER2Q86WR7 435 aaPredicted RBP16.43■□□□□ 0.22
PCM1-201ENST00000325083 CTNNA3Q9UI47 895 aa16.43■□□□□ 0.22
PCM1-201ENST00000325083 MKNK2Q9HBH9 465 aa16.43■□□□□ 0.22
PCM1-201ENST00000325083 MAP9Q49MG5 647 aa16.43■□□□□ 0.22
PCM1-201ENST00000325083 ZNF530Q6P9A1 599 aaPredicted RBP16.43■□□□□ 0.22
PCM1-201ENST00000325083 CCDC96Q2M329 555 aa16.42■□□□□ 0.22
PCM1-201ENST00000325083 HOMER2Q9NSB8 354 aa16.42■□□□□ 0.22
PCM1-201ENST00000325083 KIF4BQ2VIQ3 1234 aa16.42■□□□□ 0.22
PCM1-201ENST00000325083 PTPN14Q15678 1187 aa16.42■□□□□ 0.22
PCM1-201ENST00000325083 SPTY2D1Q68D10 685 aaPredicted RBP16.42■□□□□ 0.22
PCM1-201ENST00000325083 PRAM1Q96QH2 718 aa16.42■□□□□ 0.22
PCM1-201ENST00000325083 PPP2R1AP30153 589 aa16.42■□□□□ 0.22
PCM1-201ENST00000325083 CCDC82Q8N4S0 544 aa16.42■□□□□ 0.22
PCM1-201ENST00000325083 RRBP1Q9P2E9 1410 aaKnown RBP16.42■□□□□ 0.22
PCM1-201ENST00000325083 TXNDC2Q86VQ3 553 aa16.42■□□□□ 0.22
PCM1-201ENST00000325083 TMOD2Q9NZR1 351 aa16.42■□□□□ 0.22
PCM1-201ENST00000325083 TRMT1Q9NXH9 659 aaKnown RBP16.41■□□□□ 0.22
PCM1-201ENST00000325083 METTL24Q5JXM2 366 aa16.41■□□□□ 0.22
PCM1-201ENST00000325083 SRRTQ9BXP5 876 aaKnown RBP16.41■□□□□ 0.22
PCM1-201ENST00000325083 SLC4A8Q2Y0W8 1093 aa16.41■□□□□ 0.22
PCM1-201ENST00000325083 TDRD12Q587J7 1177 aaKnown RBP16.41■□□□□ 0.22
PCM1-201ENST00000325083 PRPF4BQ13523 1007 aaKnown RBP16.41■□□□□ 0.22
PCM1-201ENST00000325083 ZSCAN31Q96LW9 406 aaPredicted RBP16.4■□□□□ 0.22
PCM1-201ENST00000325083 LMAN1P49257 510 aa16.4■□□□□ 0.22
PCM1-201ENST00000325083 MMRN2Q9H8L6 949 aa16.4■□□□□ 0.22
PCM1-201ENST00000325083 PODXL2Q9NZ53 605 aa16.4■□□□□ 0.22
PCM1-201ENST00000325083 SMARCA2P51531 1590 aa16.4■□□□□ 0.22
PCM1-201ENST00000325083 PTPRGP23470 1445 aa16.4■□□□□ 0.22
PCM1-201ENST00000325083 CDK19Q9BWU1 502 aa16.4■□□□□ 0.22
PCM1-201ENST00000325083 GBP3Q9H0R5 595 aa16.4■□□□□ 0.22
PCM1-201ENST00000325083 PUF60Q9UHX1 559 aaKnown RBP16.4■□□□□ 0.22
PCM1-201ENST00000325083 AKNAQ7Z591 1439 aa16.4■□□□□ 0.22
PCM1-201ENST00000325083 PPP6R1Q9UPN7 881 aa16.4■□□□□ 0.22
PCM1-201ENST00000325083 ANKIB1Q9P2G1 1089 aa16.39■□□□□ 0.22
PCM1-201ENST00000325083 TOP1P11387 765 aaKnown RBP16.39■□□□□ 0.21
PCM1-201ENST00000325083 PRKCSHP14314 528 aaPredicted RBP16.39■□□□□ 0.21
PCM1-201ENST00000325083 FERMT3Q86UX7 667 aa16.39■□□□□ 0.21
PCM1-201ENST00000325083 MRPS9P82933 396 aaKnown RBP16.39■□□□□ 0.21
PCM1-201ENST00000325083 CEP126Q9P2H0 1117 aa16.39■□□□□ 0.21
PCM1-201ENST00000325083 HLTFQ14527 1009 aaKnown RBP eCLIP16.39■□□□□ 0.215e-7■□□□□ 10.4
PCM1-201ENST00000325083 ZNF219Q9P2Y4 722 aaPredicted RBP16.39■□□□□ 0.21
PCM1-201ENST00000325083 SMARCA5O60264 1052 aaPredicted RBP16.39■□□□□ 0.21
PCM1-201ENST00000325083 XPCQ01831 940 aaPredicted RBP16.39■□□□□ 0.21
PCM1-201ENST00000325083 CUL5Q93034 780 aa16.39■□□□□ 0.21
PCM1-201ENST00000325083 ARHGAP5Q13017 1502 aa16.38■□□□□ 0.21
PCM1-201ENST00000325083 IPO4Q8TEX9 1081 aaKnown RBP16.38■□□□□ 0.21
PCM1-201ENST00000325083 BRD4O60885 1362 aaPredicted RBP16.38■□□□□ 0.21
PCM1-201ENST00000325083 VPS36Q86VN1 386 aa16.38■□□□□ 0.21
PCM1-201ENST00000325083 MIS18AQ9NYP9 233 aa16.38■□□□□ 0.21
PCM1-201ENST00000325083 ANKRD18BA2A2Z9 1011 aa16.38■□□□□ 0.21
PCM1-201ENST00000325083 ZSCAN12O43309 604 aa16.38■□□□□ 0.21
PCM1-201ENST00000325083 FERP16591 822 aa16.37■□□□□ 0.21
PCM1-201ENST00000325083 SPECC1Q5M775 1068 aa16.37■□□□□ 0.21
PCM1-201ENST00000325083 PABPN1LA6NDY0 278 aaKnown RBP16.37■□□□□ 0.21
PCM1-201ENST00000325083 TERF1P54274 439 aa16.37■□□□□ 0.21
PCM1-201ENST00000325083 KRT32Q14532 448 aa16.37■□□□□ 0.21
PCM1-201ENST00000325083 RRS1Q15050 365 aaKnown RBP16.37■□□□□ 0.21
PCM1-201ENST00000325083 CLIP2Q9UDT6 1046 aa16.37■□□□□ 0.21
PCM1-201ENST00000325083 RAD54L2Q9Y4B4 1467 aa16.37■□□□□ 0.21
PCM1-201ENST00000325083 RANBP6O60518 1105 aaKnown RBP16.37■□□□□ 0.21
PCM1-201ENST00000325083 APBB1IPQ7Z5R6 666 aaPredicted RBP16.37■□□□□ 0.21
PCM1-201ENST00000325083 ZNF354CQ86Y25 554 aa16.37■□□□□ 0.21
PCM1-201ENST00000325083 CCDC144CPQ8IYA2 1237 aa16.37■□□□□ 0.21
PCM1-201ENST00000325083 ISM2Q6H9L7 571 aa16.36■□□□□ 0.21
PCM1-201ENST00000325083 LARP6Q9BRS8 491 aaKnown RBP16.36■□□□□ 0.21
PCM1-201ENST00000325083 PNISRQ8TF01 805 aaKnown RBP16.36■□□□□ 0.21
PCM1-201ENST00000325083 SFPQP23246 707 aaKnown RBP eCLIP16.36■□□□□ 0.21
PCM1-201ENST00000325083 MCM3P25205 808 aa16.36■□□□□ 0.21
PCM1-201ENST00000325083 MAATS1Q7Z4T9 603 aa16.36■□□□□ 0.21
PCM1-201ENST00000325083 DZIP1Q86YF9 867 aaKnown RBP16.36■□□□□ 0.21
PCM1-201ENST00000325083 CTR9Q6PD62 1173 aa16.36■□□□□ 0.21
PCM1-201ENST00000325083 MICALCLQ6ZW33 695 aa16.36■□□□□ 0.21
PCM1-201ENST00000325083 GIGYF2Q6Y7W6 1299 aaKnown RBP16.36■□□□□ 0.21
PCM1-201ENST00000325083 ATP2C2O75185 946 aa16.35■□□□□ 0.21
PCM1-201ENST00000325083 CCDC175P0C221 793 aa16.35■□□□□ 0.21
PCM1-201ENST00000325083 SSRP1Q08945 709 aaKnown RBP16.35■□□□□ 0.21
PCM1-201ENST00000325083 PRPF40BQ6NWY9 871 aaKnown RBP16.35■□□□□ 0.21
PCM1-201ENST00000325083 CAVIN4Q5BKX8 364 aa16.35■□□□□ 0.21
PCM1-201ENST00000325083 USO1O60763 962 aaKnown RBP16.35■□□□□ 0.21
PCM1-201ENST00000325083 NOP2P46087 812 aaKnown RBP16.35■□□□□ 0.21
PCM1-201ENST00000325083 TSNARE1Q96NA8 513 aa16.35■□□□□ 0.21
PCM1-201ENST00000325083 PRC1O43663 620 aa16.35■□□□□ 0.21
PCM1-201ENST00000325083 FGFR1OPO95684 399 aaKnown RBP16.35■□□□□ 0.21
PCM1-201ENST00000325083 MVPQ14764 893 aaKnown RBP16.35■□□□□ 0.21
PCM1-201ENST00000325083 NLRP5P59047 1200 aa16.35■□□□□ 0.21
PCM1-201ENST00000325083 ZNF444Q8N0Y2 327 aaPredicted RBP16.35■□□□□ 0.21
PCM1-201ENST00000325083 PAIP2Q9BPZ3 127 aaKnown RBP16.35■□□□□ 0.21
PCM1-201ENST00000325083 ARL1P40616 181 aaPredicted RBP16.34■□□□□ 0.21
PCM1-201ENST00000325083 PAFAH1B1P43034 410 aa16.34■□□□□ 0.21
PCM1-201ENST00000325083 TMEM266Q2M3C6 531 aa16.34■□□□□ 0.21
PCM1-201ENST00000325083 BOLA2Q9H3K6 86 aa16.34■□□□□ 0.21
PCM1-201ENST00000325083 ANO10Q9NW15 660 aa16.34■□□□□ 0.21
PCM1-201ENST00000325083 KIF18AQ8NI77 898 aa16.34■□□□□ 0.21
PCM1-201ENST00000325083 ZNF287Q9HBT7 754 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms