RNA–Protein interactions for RNA: ENST00000324862.6

PRPF3-201, Transcript of pre-mRNA processing factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF3, Length 2,433 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-201ENST00000324862 NKX1-1Q15270 411 aaPredicted RBP19.82■□□□□ 0.76
PRPF3-201ENST00000324862 SLC52A2Q9HAB3 445 aa19.82■□□□□ 0.76
PRPF3-201ENST00000324862 BTBD11A6QL63 1104 aa19.81■□□□□ 0.76
PRPF3-201ENST00000324862 BCL2L13Q9BXK5 485 aa19.81■□□□□ 0.76
PRPF3-201ENST00000324862 ILDR1Q86SU0 546 aaPredicted RBP19.8■□□□□ 0.76
PRPF3-201ENST00000324862 TCERG1O14776 1098 aaKnown RBP19.8■□□□□ 0.76
PRPF3-201ENST00000324862 HSP90AB1P08238 724 aaKnown RBP19.8■□□□□ 0.76
PRPF3-201ENST00000324862 CABP4P57796 275 aa19.8■□□□□ 0.76
PRPF3-201ENST00000324862 ADAMTS7Q9UKP4 1686 aa19.79■□□□□ 0.76
PRPF3-201ENST00000324862 BCAR3O75815 825 aa19.79■□□□□ 0.76
PRPF3-201ENST00000324862 SEPT12Q8IYM1 358 aa19.78■□□□□ 0.76
PRPF3-201ENST00000324862 ACSBG1Q96GR2 724 aa19.78■□□□□ 0.76
PRPF3-201ENST00000324862 SYTL4Q96C24 671 aaPredicted RBP19.78■□□□□ 0.76
PRPF3-201ENST00000324862 VIRMAQ69YN4 1812 aaKnown RBP19.78■□□□□ 0.76
PRPF3-201ENST00000324862 SCN11AQ9UI33 1791 aa19.77■□□□□ 0.76
PRPF3-201ENST00000324862 IRX6P78412 446 aaPredicted RBP19.77■□□□□ 0.76
PRPF3-201ENST00000324862 ZNF772Q68DY9 489 aaPredicted RBP19.77■□□□□ 0.76
PRPF3-201ENST00000324862 TOGARAM1Q9Y4F4 1720 aa19.77■□□□□ 0.75
PRPF3-201ENST00000324862 PLIN1O60240 522 aa19.76■□□□□ 0.75
PRPF3-201ENST00000324862 VAMP4O75379 141 aa19.76■□□□□ 0.75
PRPF3-201ENST00000324862 TWISTNBQ3B726 338 aaPredicted RBP19.76■□□□□ 0.75
PRPF3-201ENST00000324862 PRAMEF22A3QJZ6 481 aa19.75■□□□□ 0.75
PRPF3-201ENST00000324862 ONECUT3O60422 494 aaPredicted RBP19.75■□□□□ 0.75
PRPF3-201ENST00000324862 THSD7AQ9UPZ6 1657 aa19.75■□□□□ 0.75
PRPF3-201ENST00000324862 PRIM1P49642 420 aaKnown RBP19.75■□□□□ 0.75
PRPF3-201ENST00000324862 POTEAQ6S8J7 498 aa19.75■□□□□ 0.75
PRPF3-201ENST00000324862 ERVV-2B6SEH9 535 aa19.74■□□□□ 0.75
PRPF3-201ENST00000324862 RARSP54136 660 aaKnown RBP19.74■□□□□ 0.75
PRPF3-201ENST00000324862 PIGBQ92521 554 aa19.74■□□□□ 0.75
PRPF3-201ENST00000324862 NECTIN2Q92692 538 aa19.74■□□□□ 0.75
PRPF3-201ENST00000324862 MRC1P22897 1456 aa19.74■□□□□ 0.75
PRPF3-201ENST00000324862 KCNQ2O43526 872 aa19.74■□□□□ 0.75
PRPF3-201ENST00000324862 EIF4A1P60842 406 aaKnown RBP19.74■□□□□ 0.75
PRPF3-201ENST00000324862 ZNF790Q6PG37 636 aa19.74■□□□□ 0.75
PRPF3-201ENST00000324862 PTF1AQ7RTS3 328 aa19.74■□□□□ 0.75
PRPF3-201ENST00000324862 SSH1Q8WYL5 1049 aa19.73■□□□□ 0.75
PRPF3-201ENST00000324862 TMOD3Q9NYL9 352 aa19.73■□□□□ 0.75
PRPF3-201ENST00000324862 SIPA1L3O60292 1781 aaPredicted RBP19.72■□□□□ 0.75
PRPF3-201ENST00000324862 RBM6P78332 1123 aaKnown RBP19.72■□□□□ 0.75
PRPF3-201ENST00000324862 ASAP1Q9ULH1 1129 aa19.72■□□□□ 0.75
PRPF3-201ENST00000324862 ZNF496Q96IT1 587 aaPredicted RBP19.71■□□□□ 0.75
PRPF3-201ENST00000324862 BABAM1Q9NWV8 329 aa19.71■□□□□ 0.75
PRPF3-201ENST00000324862 KAT6BQ8WYB5 2073 aa19.7■□□□□ 0.74
PRPF3-201ENST00000324862 PTCD1O75127 700 aaKnown RBP19.7■□□□□ 0.74
PRPF3-201ENST00000324862 KDM3BQ7LBC6 1761 aa19.7■□□□□ 0.74
PRPF3-201ENST00000324862 RRP1P56182 461 aaKnown RBP19.68■□□□□ 0.74
PRPF3-201ENST00000324862 SMC4Q9NTJ3 1288 aa19.68■□□□□ 0.74
PRPF3-201ENST00000324862 TNNQ9UQP3 1299 aa19.68■□□□□ 0.74
PRPF3-201ENST00000324862 EIF2S2P20042 333 aaKnown RBP19.68■□□□□ 0.74
PRPF3-201ENST00000324862 RXRBP28702 533 aa19.68■□□□□ 0.74
PRPF3-201ENST00000324862 TTC5Q8N0Z6 440 aa19.68■□□□□ 0.74
PRPF3-201ENST00000324862 FRAT1Q92837 279 aaPredicted RBP19.68■□□□□ 0.74
PRPF3-201ENST00000324862 DOT1LQ8TEK3 1739 aa19.68■□□□□ 0.74
PRPF3-201ENST00000324862 ATG3Q9NT62 314 aa19.67■□□□□ 0.74
PRPF3-201ENST00000324862 BCL9O00512 1426 aa19.67■□□□□ 0.74
PRPF3-201ENST00000324862 C20orf194Q5TEA3 1177 aa19.67■□□□□ 0.74
PRPF3-201ENST00000324862 GIGYF1O75420 1035 aaPredicted RBP19.66■□□□□ 0.74
PRPF3-201ENST00000324862 RNF123Q5XPI4 1314 aa19.66■□□□□ 0.74
PRPF3-201ENST00000324862 CT47B1P0C2W7 299 aaPredicted RBP19.65■□□□□ 0.74
PRPF3-201ENST00000324862 GTF3C3Q9Y5Q9 886 aa19.65■□□□□ 0.74
PRPF3-201ENST00000324862 HEG1Q9ULI3 1381 aa19.65■□□□□ 0.74
PRPF3-201ENST00000324862 ITGB4P16144 1822 aa19.64■□□□□ 0.74
PRPF3-201ENST00000324862 ANXA1P04083 346 aa19.64■□□□□ 0.74
PRPF3-201ENST00000324862 KRT27Q7Z3Y8 459 aa19.64■□□□□ 0.74
PRPF3-201ENST00000324862 PIP4K2AP48426 406 aaPredicted RBP19.63■□□□□ 0.73
PRPF3-201ENST00000324862 HDGFL1Q5TGJ6 251 aa19.63■□□□□ 0.73
PRPF3-201ENST00000324862 USP16Q9Y5T5 823 aa19.63■□□□□ 0.73
PRPF3-201ENST00000324862 MRPL50Q8N5N7 158 aaKnown RBP19.63■□□□□ 0.73
PRPF3-201ENST00000324862 FMNL2Q96PY5 1086 aa19.63■□□□□ 0.73
PRPF3-201ENST00000324862 RGS12O14924 1447 aa19.63■□□□□ 0.73
PRPF3-201ENST00000324862 FKBP8Q14318 412 aa19.62■□□□□ 0.73
PRPF3-201ENST00000324862 SLC4A9Q96Q91 983 aa19.62■□□□□ 0.73
PRPF3-201ENST00000324862 RBM42Q9BTD8 480 aaKnown RBP19.62■□□□□ 0.73
PRPF3-201ENST00000324862 NOB1Q9ULX3 412 aaKnown RBP19.62■□□□□ 0.73
PRPF3-201ENST00000324862 BRWD3Q6RI45 1802 aa19.62■□□□□ 0.73
PRPF3-201ENST00000324862 KCPQ6ZWJ8 1503 aa19.62■□□□□ 0.73
PRPF3-201ENST00000324862 CLUAP1Q96AJ1 413 aa19.62■□□□□ 0.73
PRPF3-201ENST00000324862 SLC4A2P04920 1241 aa19.61■□□□□ 0.73
PRPF3-201ENST00000324862 ALDH1L2Q3SY69 923 aa19.61■□□□□ 0.73
PRPF3-201ENST00000324862 G2E3Q7L622 706 aa19.61■□□□□ 0.73
PRPF3-201ENST00000324862 PROSER3Q2NL68 480 aa19.6■□□□□ 0.73
PRPF3-201ENST00000324862 CHPF2Q9P2E5 772 aa19.6■□□□□ 0.73
PRPF3-201ENST00000324862 CANXP27824 592 aaKnown RBP19.6■□□□□ 0.73
PRPF3-201ENST00000324862 KCNQ4P56696 695 aa19.6■□□□□ 0.73
PRPF3-201ENST00000324862 PAPPAQ13219 1627 aa19.59■□□□□ 0.73
PRPF3-201ENST00000324862 SNRPA1P09661 255 aaKnown RBP19.59■□□□□ 0.73
PRPF3-201ENST00000324862 PANK1Q8TE04 598 aa19.59■□□□□ 0.73
PRPF3-201ENST00000324862 C5P01031 1676 aa19.58■□□□□ 0.73
PRPF3-201ENST00000324862 RLBP1P12271 317 aa19.58■□□□□ 0.72
PRPF3-201ENST00000324862 ZNF428Q96B54 188 aa19.58■□□□□ 0.72
PRPF3-201ENST00000324862 PHAXQ9H814 394 aaKnown RBP19.58■□□□□ 0.72
PRPF3-201ENST00000324862 CCDC30Q5VVM6 783 aa19.57■□□□□ 0.72
PRPF3-201ENST00000324862 TRIM27P14373 513 aa19.57■□□□□ 0.72
PRPF3-201ENST00000324862 DNAJC10Q8IXB1 793 aa19.57■□□□□ 0.72
PRPF3-201ENST00000324862 TRIM37O94972 964 aa19.56■□□□□ 0.72
PRPF3-201ENST00000324862 UBR2Q8IWV8 1755 aa19.56■□□□□ 0.72
PRPF3-201ENST00000324862 HOXB7P09629 217 aa19.56■□□□□ 0.72
PRPF3-201ENST00000324862 PALLDQ8WX93 1383 aa19.56■□□□□ 0.72
PRPF3-201ENST00000324862 NEFLP07196 543 aa19.55■□□□□ 0.72
PRPF3-201ENST00000324862 PDIA6Q15084 440 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms