RNA–Protein interactions for RNA: ENST00000324677.11

SSH2-202, Transcript of slingshot protein phosphatase 2, humanhuman

TSL 1 (best)

Gene SSH2, Length 913 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH2-202ENST00000324677 CCER1Q8TC90 406 aaPredicted RBP27.21■■□□□ 1.95
SSH2-202ENST00000324677 ERVV-2B6SEH9 535 aa27.19■■□□□ 1.94
SSH2-202ENST00000324677 GNPATO15228 680 aa27.19■■□□□ 1.94
SSH2-202ENST00000324677 C1QTNF8P60827 252 aa27.19■■□□□ 1.94
SSH2-202ENST00000324677 PLEKHO1Q53GL0 409 aaPredicted RBP27.19■■□□□ 1.94
SSH2-202ENST00000324677 MORC1Q86VD1 984 aa27.19■■□□□ 1.94
SSH2-202ENST00000324677 HSP90AB1P08238 724 aaKnown RBP27.18■■□□□ 1.94
SSH2-202ENST00000324677 DCAF5Q96JK2 942 aa27.18■■□□□ 1.94
SSH2-202ENST00000324677 KDRP35968 1356 aa27.18■■□□□ 1.94
SSH2-202ENST00000324677 COL5A3P25940 1745 aaPredicted RBP27.18■■□□□ 1.94
SSH2-202ENST00000324677 KDM6AO15550 1401 aaPredicted RBP27.16■■□□□ 1.94
SSH2-202ENST00000324677 AMOTQ4VCS5 1084 aa27.15■■□□□ 1.94
SSH2-202ENST00000324677 ZNF530Q6P9A1 599 aaPredicted RBP27.15■■□□□ 1.94
SSH2-202ENST00000324677 SLC4A9Q96Q91 983 aa27.14■■□□□ 1.94
SSH2-202ENST00000324677 KNSTRNQ9Y448 316 aa27.14■■□□□ 1.94
SSH2-202ENST00000324677 GIGYF1O75420 1035 aaPredicted RBP27.13■■□□□ 1.93
SSH2-202ENST00000324677 AEBP1Q8IUX7 1158 aa27.13■■□□□ 1.93
SSH2-202ENST00000324677 RBM42Q9BTD8 480 aaKnown RBP27.13■■□□□ 1.93
SSH2-202ENST00000324677 MYH14Q7Z406 1995 aaKnown RBP27.11■■□□□ 1.93
SSH2-202ENST00000324677 KIF13BQ9NQT8 1826 aa27.11■■□□□ 1.93
SSH2-202ENST00000324677 CABP4P57796 275 aa27.1■■□□□ 1.93
SSH2-202ENST00000324677 RTCBQ9Y3I0 505 aaKnown RBP27.1■■□□□ 1.93
SSH2-202ENST00000324677 SCN11AQ9UI33 1791 aa27.09■■□□□ 1.93
SSH2-202ENST00000324677 SENP3-EIF4A1A0A087X0R7 540 aa27.09■■□□□ 1.93
SSH2-202ENST00000324677 C1orf141Q5JVX7 400 aa27.09■■□□□ 1.93
SSH2-202ENST00000324677 TRAPPC3LQ5T215 181 aa27.09■■□□□ 1.93
SSH2-202ENST00000324677 RC3H1Q5TC82 1133 aaKnown RBP27.09■■□□□ 1.93
SSH2-202ENST00000324677 SULT6B1Q6IMI4 303 aa27.09■■□□□ 1.93
SSH2-202ENST00000324677 MTHFSP49914 203 aa27.08■■□□□ 1.93
SSH2-202ENST00000324677 MMP10P09238 476 aa27.07■■□□□ 1.92
SSH2-202ENST00000324677 IL13P35225 146 aa27.07■■□□□ 1.92
SSH2-202ENST00000324677 CNTNAP4Q9C0A0 1308 aa27.07■■□□□ 1.92
SSH2-202ENST00000324677 ATP10DQ9P241 1426 aa27.07■■□□□ 1.92
SSH2-202ENST00000324677 AMER1Q5JTC6 1135 aaPredicted RBP27.06■■□□□ 1.92
SSH2-202ENST00000324677 WWC3Q9ULE0 1092 aa27.06■■□□□ 1.92
SSH2-202ENST00000324677 C4AP0C0L4 1744 aa27.06■■□□□ 1.92
SSH2-202ENST00000324677 KIAA1551Q9HCM1 1747 aa27.06■■□□□ 1.92
SSH2-202ENST00000324677 VIRMAQ69YN4 1812 aaKnown RBP27.06■■□□□ 1.92
SSH2-202ENST00000324677 ADRA2BP18089 450 aa27.05■■□□□ 1.92
SSH2-202ENST00000324677 N4BP2Q86UW6 1770 aaPredicted RBP27.04■■□□□ 1.92
SSH2-202ENST00000324677 NFATC2IPQ8NCF5 419 aa27.04■■□□□ 1.92
SSH2-202ENST00000324677 ARHGEF1Q92888 912 aaKnown RBP27.04■■□□□ 1.92
SSH2-202ENST00000324677 CICQ96RK0 1608 aaPredicted RBP27.04■■□□□ 1.92
SSH2-202ENST00000324677 ADCY9O60503 1353 aa27.03■■□□□ 1.92
SSH2-202ENST00000324677 RPS6KA4O75676 772 aa27.03■■□□□ 1.92
SSH2-202ENST00000324677 KIF7Q2M1P5 1343 aa27.03■■□□□ 1.92
SSH2-202ENST00000324677 NLGN1Q8N2Q7 840 aa27.03■■□□□ 1.92
SSH2-202ENST00000324677 TJP1Q07157 1748 aa27.02■■□□□ 1.92
SSH2-202ENST00000324677 PTCD1O75127 700 aaKnown RBP27.02■■□□□ 1.92
SSH2-202ENST00000324677 PXDNLA1KZ92 1463 aa27■■□□□ 1.91
SSH2-202ENST00000324677 GYS1P13807 737 aa27■■□□□ 1.91
SSH2-202ENST00000324677 RFC4P35249 363 aa27■■□□□ 1.91
SSH2-202ENST00000324677 AKAP4Q5JQC9 854 aa26.98■■□□□ 1.91
SSH2-202ENST00000324677 C10orf71Q711Q0 1435 aa26.98■■□□□ 1.91
SSH2-202ENST00000324677 TGFB2P61812 414 aa26.97■■□□□ 1.91
SSH2-202ENST00000324677 BRCA1P38398 1863 aaKnown RBP26.97■■□□□ 1.91
SSH2-202ENST00000324677 CRKLP46109 303 aaKnown RBP26.96■■□□□ 1.91
SSH2-202ENST00000324677 GPBP1L1Q9HC44 474 aaPredicted RBP26.96■■□□□ 1.91
SSH2-202ENST00000324677 CEP350Q5VT06 3117 aa26.95■■□□□ 1.91
SSH2-202ENST00000324677 PER1O15534 1290 aaPredicted RBP26.95■■□□□ 1.9
SSH2-202ENST00000324677 CCDC87Q9NVE4 849 aa26.94■■□□□ 1.9
SSH2-202ENST00000324677 A0A0G2JLW4 131 aa26.93■■□□□ 1.9
SSH2-202ENST00000324677 SLC52A2Q9HAB3 445 aa26.93■■□□□ 1.9
SSH2-202ENST00000324677 LGR6Q9HBX8 967 aa26.93■■□□□ 1.9
SSH2-202ENST00000324677 PARP3Q9Y6F1 533 aa26.93■■□□□ 1.9
SSH2-202ENST00000324677 MRC1P22897 1456 aa26.93■■□□□ 1.9
SSH2-202ENST00000324677 ADAMTS7Q9UKP4 1686 aa26.92■■□□□ 1.9
SSH2-202ENST00000324677 HMOX1P09601 288 aa26.92■■□□□ 1.9
SSH2-202ENST00000324677 ZNF526Q8TF50 670 aaPredicted RBP26.92■■□□□ 1.9
SSH2-202ENST00000324677 USP42Q9H9J4 1324 aaKnown RBP26.9■■□□□ 1.9
SSH2-202ENST00000324677 CC2D1BQ5T0F9 858 aaKnown RBP26.9■■□□□ 1.9
SSH2-202ENST00000324677 SRP68Q9UHB9 627 aaKnown RBP26.9■■□□□ 1.9
SSH2-202ENST00000324677 ARFGEF1Q9Y6D6 1849 aa26.89■■□□□ 1.9
SSH2-202ENST00000324677 RNMTO43148 476 aaKnown RBP26.89■■□□□ 1.9
SSH2-202ENST00000324677 INTS5Q6P9B9 1019 aaKnown RBP26.89■■□□□ 1.9
SSH2-202ENST00000324677 BCS1LQ9Y276 419 aa26.89■■□□□ 1.9
SSH2-202ENST00000324677 DIAPH1O60610 1272 aaKnown RBP26.88■■□□□ 1.89
SSH2-202ENST00000324677 DPEP1P16444 411 aa26.88■■□□□ 1.89
SSH2-202ENST00000324677 FKBP8Q14318 412 aa26.87■■□□□ 1.89
SSH2-202ENST00000324677 MTHFSDQ2M296 383 aaKnown RBP26.87■■□□□ 1.89
SSH2-202ENST00000324677 DNAJC10Q8IXB1 793 aa26.87■■□□□ 1.89
SSH2-202ENST00000324677 KCPQ6ZWJ8 1503 aa26.85■■□□□ 1.89
SSH2-202ENST00000324677 SLC39A6Q13433 755 aa26.85■■□□□ 1.89
SSH2-202ENST00000324677 UBR2Q8IWV8 1755 aa26.84■■□□□ 1.89
SSH2-202ENST00000324677 KCNA3P22001 575 aa26.84■■□□□ 1.89
SSH2-202ENST00000324677 DDR1Q08345 913 aa26.84■■□□□ 1.89
SSH2-202ENST00000324677 COL3A1P02461 1466 aaPredicted RBP26.83■■□□□ 1.89
SSH2-202ENST00000324677 FCHSD2O94868 740 aa26.83■■□□□ 1.89
SSH2-202ENST00000324677 NPC1L1Q9UHC9 1359 aa26.83■■□□□ 1.88
SSH2-202ENST00000324677 CYP19A1P11511 503 aaPredicted RBP26.82■■□□□ 1.88
SSH2-202ENST00000324677 ARHGAP27Q6ZUM4 889 aa26.82■■□□□ 1.88
SSH2-202ENST00000324677 SOS1Q07889 1333 aaPredicted RBP26.82■■□□□ 1.88
SSH2-202ENST00000324677 AFDNP55196 1824 aaKnown RBP26.81■■□□□ 1.88
SSH2-202ENST00000324677 ZPR1O75312 459 aa26.8■■□□□ 1.88
SSH2-202ENST00000324677 TM4SF1P30408 202 aa26.8■■□□□ 1.88
SSH2-202ENST00000324677 USPL1Q5W0Q7 1092 aa26.8■■□□□ 1.88
SSH2-202ENST00000324677 POLRMTO00411 1230 aaKnown RBP26.79■■□□□ 1.88
SSH2-202ENST00000324677 KIF3CO14782 793 aa26.79■■□□□ 1.88
SSH2-202ENST00000324677 PIM2Q9P1W9 311 aa26.79■■□□□ 1.88
SSH2-202ENST00000324677 VSIG10Q8N0Z9 540 aa26.78■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms